RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 EPDR1Q9UM22 224 aa10.48□□□□□ -0.73
SHMT2-203ENST00000449049 EGFEM1PQ0D2K5 195 aa10.47□□□□□ -0.73
SHMT2-203ENST00000449049 ODF3L2Q3SX64 289 aa10.47□□□□□ -0.73
SHMT2-203ENST00000449049 PSMG4Q5JS54 123 aa10.47□□□□□ -0.73
SHMT2-203ENST00000449049 ZNF738Q8NE65 137 aa10.47□□□□□ -0.73
SHMT2-203ENST00000449049 CMTM2Q8TAZ6 248 aa10.47□□□□□ -0.73
SHMT2-203ENST00000449049 YPEL4Q96NS1 127 aa10.47□□□□□ -0.73
SHMT2-203ENST00000449049 FAM110AQ9BQ89 295 aa10.47□□□□□ -0.73
SHMT2-203ENST00000449049 SMDT1Q9H4I9 107 aa10.47□□□□□ -0.73
SHMT2-203ENST00000449049 VWFP04275 2813 aa10.47□□□□□ -0.73
SHMT2-203ENST00000449049 ZNF705FA8MVS1 300 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-203ENST00000449049 PDE6DO43924 150 aa10.46□□□□□ -0.73
SHMT2-203ENST00000449049 TCRAP04437 139 aa10.46□□□□□ -0.73
SHMT2-203ENST00000449049 CSN1S1P47710 185 aa10.46□□□□□ -0.73
SHMT2-203ENST00000449049 GNG5P63218 68 aa10.46□□□□□ -0.73
SHMT2-203ENST00000449049 SAMD5Q5TGI4 173 aa10.46□□□□□ -0.73
SHMT2-203ENST00000449049 DIRC3C9JPN6 131 aa10.46□□□□□ -0.74
SHMT2-203ENST00000449049 F6UZH7 168 aa10.46□□□□□ -0.74
SHMT2-203ENST00000449049 CMC4P56277 68 aaPredicted RBP10.46□□□□□ -0.74
SHMT2-203ENST00000449049 C11orf52Q96A22 123 aa10.46□□□□□ -0.74
SHMT2-203ENST00000449049 RPUSD4Q96CM3 377 aaKnown RBP10.46□□□□□ -0.74
SHMT2-203ENST00000449049 SLC35B3Q9H1N7 401 aa10.46□□□□□ -0.74
SHMT2-203ENST00000449049 SCO2A0A1W2PP80 73 aa10.45□□□□□ -0.74
SHMT2-203ENST00000449049 PRAC2D3DTV9 90 aa10.45□□□□□ -0.74
SHMT2-203ENST00000449049 PEX7O00628 323 aa10.45□□□□□ -0.74
SHMT2-203ENST00000449049 DEFB131AP59861 70 aa10.45□□□□□ -0.74
SHMT2-203ENST00000449049 COTL1Q14019 142 aa10.45□□□□□ -0.74
SHMT2-203ENST00000449049 PYY3Q5JQD4 70 aa10.45□□□□□ -0.74
SHMT2-203ENST00000449049 ATG101Q9BSB4 218 aa10.45□□□□□ -0.74
SHMT2-203ENST00000449049 C19orf73Q9NVV2 129 aa10.45□□□□□ -0.74
SHMT2-203ENST00000449049 TRRAPQ9Y4A5 3859 aa10.45□□□□□ -0.74
SHMT2-203ENST00000449049 SERTM2A0A1B0GWG4 89 aa10.45□□□□□ -0.74
SHMT2-203ENST00000449049 CD7P09564 240 aa10.45□□□□□ -0.74
SHMT2-203ENST00000449049 RPH3ALQ9UNE2 315 aa10.45□□□□□ -0.74
SHMT2-203ENST00000449049 IFITM10A6NMD0 228 aa10.44□□□□□ -0.74
SHMT2-203ENST00000449049 OR11H12B2RN74 326 aa10.44□□□□□ -0.74
SHMT2-203ENST00000449049 G3V4G9 280 aa10.44□□□□□ -0.74
SHMT2-203ENST00000449049 TMEM250H0YL14 139 aa10.44□□□□□ -0.74
SHMT2-203ENST00000449049 SRP19P09132 144 aaKnown RBP10.44□□□□□ -0.74
SHMT2-203ENST00000449049 CYB561D1Q8N8Q1 229 aa10.44□□□□□ -0.74
SHMT2-203ENST00000449049 RBAKDNA6NC62 111 aa10.43□□□□□ -0.74
SHMT2-203ENST00000449049 PRB4P10163 310 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-203ENST00000449049 DEFB1P60022 68 aa10.43□□□□□ -0.74
SHMT2-203ENST00000449049 FOXI2Q6ZQN5 318 aa10.43□□□□□ -0.74
SHMT2-203ENST00000449049 GOLT1AQ6ZVE7 132 aa10.43□□□□□ -0.74
SHMT2-203ENST00000449049 GTSCR1Q86UQ5 136 aa10.43□□□□□ -0.74
SHMT2-203ENST00000449049 IGKV2-40A0A087WW87 121 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-203ENST00000449049 F6UB75 175 aa10.43□□□□□ -0.74
SHMT2-203ENST00000449049 IGKV2D-40P01614 121 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-203ENST00000449049 S100A2P29034 98 aa10.43□□□□□ -0.74
SHMT2-203ENST00000449049 KRTAP10-11P60412 298 aa10.43□□□□□ -0.74
SHMT2-203ENST00000449049 OR8A1Q8NGG7 326 aa10.43□□□□□ -0.74
SHMT2-203ENST00000449049 A0A0J9YX75 114 aa10.42□□□□□ -0.74
SHMT2-203ENST00000449049 DNLZQ5SXM8 178 aa10.42□□□□□ -0.74
SHMT2-203ENST00000449049 GDF5OSQ5U4N7 250 aa10.42□□□□□ -0.74
SHMT2-203ENST00000449049 APRG1Q8IVJ8 170 aa10.42□□□□□ -0.74
SHMT2-203ENST00000449049 K7EQM0 130 aa10.42□□□□□ -0.74
SHMT2-203ENST00000449049 RPS10P46783 165 aaKnown RBP10.42□□□□□ -0.74
SHMT2-203ENST00000449049 C9orf47Q6ZRZ4 202 aa10.42□□□□□ -0.74
SHMT2-203ENST00000449049 TMEM75Q8N9X5 138 aa10.42□□□□□ -0.74
SHMT2-203ENST00000449049 LINC00479Q96M42 142 aa10.42□□□□□ -0.74
SHMT2-203ENST00000449049 KLF12Q9Y4X4 402 aa10.42□□□□□ -0.74
SHMT2-203ENST00000449049 NPIPB6E9PJ23 425 aa10.41□□□□□ -0.74
SHMT2-203ENST00000449049 IGLV2-11P01706 119 aa10.41□□□□□ -0.74
SHMT2-203ENST00000449049 NDUFA6P56556 154 aa10.41□□□□□ -0.74
SHMT2-203ENST00000449049 SOHLH1Q5JUK2 328 aa10.41□□□□□ -0.74
SHMT2-203ENST00000449049 EBLN2Q6P2I7 272 aa10.41□□□□□ -0.74
SHMT2-203ENST00000449049 OR10J6PQ8NGY7 276 aa10.41□□□□□ -0.74
SHMT2-203ENST00000449049 VGLL1Q99990 258 aa10.41□□□□□ -0.74
SHMT2-203ENST00000449049 FBLL1A6NHQ2 334 aaKnown RBP10.4□□□□□ -0.74
SHMT2-203ENST00000449049 ZNF705DP0CH99 300 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-203ENST00000449049 ZNF705BP0CI00 300 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-203ENST00000449049 HLA-DRB4P13762 266 aa10.4□□□□□ -0.74
SHMT2-203ENST00000449049 CNN1P51911 297 aaKnown RBP10.4□□□□□ -0.74
SHMT2-203ENST00000449049 HIST1H1AQ02539 215 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-203ENST00000449049 TMEM183BQ1AE95 376 aa10.4□□□□□ -0.74
SHMT2-203ENST00000449049 Q8N1Y9 231 aa10.4□□□□□ -0.74
SHMT2-203ENST00000449049 FMC1Q96HJ9 113 aa10.4□□□□□ -0.74
SHMT2-203ENST00000449049 DERL1Q9BUN8 251 aa10.4□□□□□ -0.74
SHMT2-203ENST00000449049 HLA-DRB4X5D2U9 266 aa10.4□□□□□ -0.74
SHMT2-203ENST00000449049 TRAV8-1A0A0A6YYK1 113 aa10.4□□□□□ -0.74
SHMT2-203ENST00000449049 TRBV6-1A0A0K0K1D8 114 aa10.4□□□□□ -0.74
SHMT2-203ENST00000449049 KNCNA6PVL3 124 aa10.4□□□□□ -0.74
SHMT2-203ENST00000449049 A8MTW9 85 aa10.4□□□□□ -0.74
SHMT2-203ENST00000449049 DUSP14O95147 198 aaKnown RBP10.4□□□□□ -0.74
SHMT2-203ENST00000449049 ERCC8Q13216 396 aa10.4□□□□□ -0.74
SHMT2-203ENST00000449049 KPRPQ5T749 579 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-203ENST00000449049 PRR25Q96S07 402 aa10.4□□□□□ -0.74
SHMT2-203ENST00000449049 AGPAT4-IT1Q9H0P7 198 aa10.4□□□□□ -0.74
SHMT2-203ENST00000449049 WFDC10AQ9H1F0 79 aa10.4□□□□□ -0.74
SHMT2-203ENST00000449049 A0A087WWC5 75 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 TRAV34A0A0B4J273 112 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 H3BMM0 161 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 DDTP30046 118 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 ACTL10Q5JWF8 245 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 CDPF1Q6NVV7 123 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 LINC00477Q96M19 166 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 PARLQ9H300 379 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 CMYA5Q8N3K9 4069 aa10.39□□□□□ -0.75
SHMT2-203ENST00000449049 NUTF2P61970 127 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms