RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 IGHV3-74A0A0B4J1X5 117 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 XKRY2A2RUG3 117 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 FOSL1P15407 271 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 COA6Q5JTJ3 125 aaKnown RBP8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 Q6AWC8 147 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 IL17RELQ6ZVW7 336 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 OR2D3Q8NGH3 330 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 ZC2HC1AQ96GY0 325 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 PRR25Q96S07 402 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 NEU1Q99519 415 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 TMEM160Q9NX00 188 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 SMPXQ9UHP9 88 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 IGKV2-40A0A087WW87 121 aaPredicted RBP8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 HIGD1CA8MV81 97 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 CA1P00915 261 aaPredicted RBP8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 IGKV2D-40P01614 121 aaPredicted RBP8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 CBLN1P23435 193 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 SMUG1Q53HV7 270 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 FAM162BQ5T6X4 162 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 LINC00322Q6ZN03 302 aaPredicted RBP8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 RBPMS2Q6ZRY4 209 aaKnown RBP8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 NUP35Q8NFH5 326 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 RHPN1-AS1Q9BWJ2 59 aa8.07□□□□□ -1.12
VIPAS39-203ENST00000448935 LGALS9O00182 355 aa8.06□□□□□ -1.12
VIPAS39-203ENST00000448935 S100A2P29034 98 aa8.06□□□□□ -1.12
VIPAS39-203ENST00000448935 RPS20P60866 119 aaKnown RBP8.06□□□□□ -1.12
VIPAS39-203ENST00000448935 RAB4BP61018 213 aa8.06□□□□□ -1.12
VIPAS39-203ENST00000448935 TMEM78Q5T7P6 136 aa8.06□□□□□ -1.12
VIPAS39-203ENST00000448935 MRPL54Q6P161 138 aaKnown RBP8.06□□□□□ -1.12
VIPAS39-203ENST00000448935 NRN1Q9NPD7 142 aa8.06□□□□□ -1.12
VIPAS39-203ENST00000448935 PPP1R14DQ9NXH3 145 aa8.06□□□□□ -1.12
VIPAS39-203ENST00000448935 CENPEQ02224 2701 aa8.05□□□□□ -1.12
VIPAS39-203ENST00000448935 TRAV8-2A0A0B4J237 113 aa8.05□□□□□ -1.12
VIPAS39-203ENST00000448935 DNAJC9-AS1A6NH13 148 aa8.05□□□□□ -1.12
VIPAS39-203ENST00000448935 ZNF705FA8MVS1 300 aaPredicted RBP8.05□□□□□ -1.12
VIPAS39-203ENST00000448935 OVOL1O14753 267 aa8.05□□□□□ -1.12
VIPAS39-203ENST00000448935 SPINK4O60575 86 aa8.05□□□□□ -1.12
VIPAS39-203ENST00000448935 HLA-DMBP28068 263 aa8.05□□□□□ -1.12
VIPAS39-203ENST00000448935 FOXA3P55318 350 aaPredicted RBP8.05□□□□□ -1.12
VIPAS39-203ENST00000448935 KRTAP1-1Q07627 177 aa8.05□□□□□ -1.12
VIPAS39-203ENST00000448935 IGFL4Q6B9Z1 124 aa8.05□□□□□ -1.12
VIPAS39-203ENST00000448935 TMEM136Q6ZRR5 245 aa8.05□□□□□ -1.12
VIPAS39-203ENST00000448935 KLHDC1Q8N7A1 406 aa8.05□□□□□ -1.12
VIPAS39-203ENST00000448935 VGLL1Q99990 258 aa8.05□□□□□ -1.12
VIPAS39-203ENST00000448935 LENEPQ9Y5L5 61 aa8.05□□□□□ -1.12
VIPAS39-203ENST00000448935 A0A1B0GW15 77 aa8.04□□□□□ -1.12
VIPAS39-203ENST00000448935 A8MWP6 167 aa8.04□□□□□ -1.12
VIPAS39-203ENST00000448935 HBBP68871 147 aa8.04□□□□□ -1.12
VIPAS39-203ENST00000448935 C10orf99Q6UWK7 81 aa8.04□□□□□ -1.12
VIPAS39-203ENST00000448935 C9orf47Q6ZRZ4 202 aa8.04□□□□□ -1.12
VIPAS39-203ENST00000448935 HIST3H2BBQ8N257 126 aa8.04□□□□□ -1.12
VIPAS39-203ENST00000448935 RNF182Q8N6D2 247 aa8.04□□□□□ -1.12
VIPAS39-203ENST00000448935 BORCS7Q96B45 105 aa8.04□□□□□ -1.12
VIPAS39-203ENST00000448935 C8orf49Q96NF6 230 aa8.04□□□□□ -1.12
VIPAS39-203ENST00000448935 DUX5Q96PT3 197 aa8.04□□□□□ -1.12
VIPAS39-203ENST00000448935 ASCL2Q99929 193 aa8.04□□□□□ -1.12
VIPAS39-203ENST00000448935 VPS13CQ709C8 3753 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 TMEM189A5PLL7 270 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 FAM181BA6NEQ2 426 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 FABP5P3A8MUU1 101 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 APCSP02743 223 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 SMIM6P0DI80 62 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 CRISP2P16562 243 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 ID1P41134 155 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 ZNF138P52744 262 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 TCF24Q7RTU0 167 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 LINC00518Q8N0U6 118 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 ZNF738Q8NE65 137 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 OR10J6PQ8NGY7 276 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 ZNF418Q8TF45 676 aaPredicted RBP8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 CSMD2Q7Z408 3487 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 A0A1B0GXF2 115 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 M0QZ24 198 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 SOCS3O14543 225 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 SH2D1AO60880 128 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 CRIP1P50238 77 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 Q6ZSV7 163 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 GTSF1Q8WW33 167 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 PGLYRP4Q96LB8 373 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 LINC00477Q96M19 166 aa8.03□□□□□ -1.12
VIPAS39-203ENST00000448935 CELSR1Q9NYQ6 3014 aa8.02□□□□□ -1.13
VIPAS39-203ENST00000448935 IGHV4OR15-8A0A075B7B6 117 aa8.02□□□□□ -1.13
VIPAS39-203ENST00000448935 A0A087WW49 117 aa8.02□□□□□ -1.13
VIPAS39-203ENST00000448935 A0A1B0GUT8 65 aa8.02□□□□□ -1.13
VIPAS39-203ENST00000448935 PRAC2D3DTV9 90 aa8.02□□□□□ -1.13
VIPAS39-203ENST00000448935 HIST1H1AQ02539 215 aaPredicted RBP8.02□□□□□ -1.13
VIPAS39-203ENST00000448935 Q0VG73 95 aa8.02□□□□□ -1.13
VIPAS39-203ENST00000448935 RIGQ13278 110 aa8.02□□□□□ -1.13
VIPAS39-203ENST00000448935 OR10J3Q5JRS4 329 aa8.02□□□□□ -1.13
VIPAS39-203ENST00000448935 Q8TAT8 98 aa8.02□□□□□ -1.13
VIPAS39-203ENST00000448935 C4orf3Q8WVX3 66 aa8.02□□□□□ -1.13
VIPAS39-203ENST00000448935 GPR61Q9BZJ8 451 aa8.02□□□□□ -1.13
VIPAS39-203ENST00000448935 AGPAT4-IT1Q9H0P7 198 aa8.02□□□□□ -1.13
VIPAS39-203ENST00000448935 TRBV7-9A0A0J9YWB2 115 aa8.01□□□□□ -1.13
VIPAS39-203ENST00000448935 TMEM213A2RRL7 107 aa8.01□□□□□ -1.13
VIPAS39-203ENST00000448935 WIPF1O43516 503 aa8.01□□□□□ -1.13
VIPAS39-203ENST00000448935 RNASE1P07998 156 aaKnown RBP8.01□□□□□ -1.13
VIPAS39-203ENST00000448935 SRD5A1P18405 259 aa8.01□□□□□ -1.13
VIPAS39-203ENST00000448935 HOXD3P31249 432 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms