RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, human

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-208	ENST00000448611		A0A1B0GXF2	115 aa		13.48	□□□□□ -0.25
LMNA-208	ENST00000448611	RAB4B	P61018	213 aa		13.48	□□□□□ -0.25
LMNA-208	ENST00000448611	ERCC8	Q13216	396 aa		13.48	□□□□□ -0.25
LMNA-208	ENST00000448611	FAM106A	Q4KMX7	169 aa		13.48	□□□□□ -0.25
LMNA-208	ENST00000448611	ATP5L2	Q7Z4Y8	100 aa		13.48	□□□□□ -0.25
LMNA-208	ENST00000448611	LGALS1	P09382	135 aa	Known RBP	13.47	□□□□□ -0.25
LMNA-208	ENST00000448611	GDF5OS	Q5U4N7	250 aa		13.47	□□□□□ -0.25
LMNA-208	ENST00000448611	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.47	□□□□□ -0.25
LMNA-208	ENST00000448611	C16orf92	Q96LL3	132 aa		13.47	□□□□□ -0.25
LMNA-208	ENST00000448611	SMR3A	Q99954	134 aa		13.47	□□□□□ -0.25
LMNA-208	ENST00000448611	RHPN1-AS1	Q9BWJ2	59 aa		13.47	□□□□□ -0.25
LMNA-208	ENST00000448611	CLEC5A	Q9NY25	188 aa		13.47	□□□□□ -0.25
LMNA-208	ENST00000448611	SMPX	Q9UHP9	88 aa		13.47	□□□□□ -0.25
LMNA-208	ENST00000448611	SOCS3	O14543	225 aa		13.47	□□□□□ -0.25
LMNA-208	ENST00000448611	GZMB	P10144	247 aa		13.47	□□□□□ -0.25
LMNA-208	ENST00000448611	FOXA3	P55318	350 aa	Predicted RBP	13.47	□□□□□ -0.25
LMNA-208	ENST00000448611	PGLYRP4	Q96LB8	373 aa		13.47	□□□□□ -0.25
LMNA-208	ENST00000448611	UBE2E2	Q96LR5	201 aa		13.47	□□□□□ -0.25
LMNA-208	ENST00000448611	FAM162B	Q5T6X4	162 aa		13.46	□□□□□ -0.25
LMNA-208	ENST00000448611	C12orf57	Q99622	126 aa		13.46	□□□□□ -0.25
LMNA-208	ENST00000448611	HIST1H2BL	Q99880	126 aa		13.46	□□□□□ -0.25
LMNA-208	ENST00000448611	SH2D1A	O60880	128 aa		13.45	□□□□□ -0.26
LMNA-208	ENST00000448611	SMIM6	P0DI80	62 aa		13.45	□□□□□ -0.26
LMNA-208	ENST00000448611	S100A2	P29034	98 aa		13.45	□□□□□ -0.26
LMNA-208	ENST00000448611	ZNF80	P51504	273 aa	Predicted RBP	13.45	□□□□□ -0.26
LMNA-208	ENST00000448611	C20orf173	Q96LM9	149 aa		13.45	□□□□□ -0.26
LMNA-208	ENST00000448611	AGPAT4-IT1	Q9H0P7	198 aa		13.45	□□□□□ -0.26
LMNA-208	ENST00000448611	GRIFIN	A4D1Z8	144 aa		13.45	□□□□□ -0.26
LMNA-208	ENST00000448611	DNAJC9-AS1	A6NH13	148 aa		13.45	□□□□□ -0.26
LMNA-208	ENST00000448611	CRISP2	P16562	243 aa		13.45	□□□□□ -0.26
LMNA-208	ENST00000448611	EDN2	P20800	178 aa		13.45	□□□□□ -0.26
LMNA-208	ENST00000448611	NDFIP1	Q9BT67	221 aa		13.45	□□□□□ -0.26
LMNA-208	ENST00000448611	NRN1	Q9NPD7	142 aa		13.45	□□□□□ -0.26
LMNA-208	ENST00000448611	YAE1D1	Q9NRH1	226 aa		13.45	□□□□□ -0.26
LMNA-208	ENST00000448611	UFC1	Q9Y3C8	167 aa		13.45	□□□□□ -0.26
LMNA-208	ENST00000448611		A0A1B0GUS0	222 aa		13.44	□□□□□ -0.26
LMNA-208	ENST00000448611	APCS	P02743	223 aa		13.44	□□□□□ -0.26
LMNA-208	ENST00000448611	FABP4	P15090	132 aa		13.44	□□□□□ -0.26
LMNA-208	ENST00000448611	HBB	P68871	147 aa		13.44	□□□□□ -0.26
LMNA-208	ENST00000448611	SLA	Q13239	276 aa		13.44	□□□□□ -0.26
LMNA-208	ENST00000448611	CAMP	P49913	170 aa		13.43	□□□□□ -0.26
LMNA-208	ENST00000448611	KIAA1644	Q3SXP7	199 aa		13.43	□□□□□ -0.26
LMNA-208	ENST00000448611	C9orf47	Q6ZRZ4	202 aa		13.43	□□□□□ -0.26
LMNA-208	ENST00000448611	OR10D4P	Q8NGN7	298 aa		13.43	□□□□□ -0.26
LMNA-208	ENST00000448611	TP53TG3	Q9ULZ0	132 aa		13.43	□□□□□ -0.26
LMNA-208	ENST00000448611	TLN2	Q9Y4G6	2542 aa		13.43	□□□□□ -0.26
LMNA-208	ENST00000448611	IGHV4OR15-8	A0A075B7B6	117 aa		13.43	□□□□□ -0.26
LMNA-208	ENST00000448611		A0A087WW49	117 aa		13.43	□□□□□ -0.26
LMNA-208	ENST00000448611	TMEM213	A2RRL7	107 aa		13.43	□□□□□ -0.26
LMNA-208	ENST00000448611	FAM181B	A6NEQ2	426 aa		13.43	□□□□□ -0.26
LMNA-208	ENST00000448611	AMBP	P02760	352 aa		13.43	□□□□□ -0.26
LMNA-208	ENST00000448611	TMEM256	Q8N2U0	113 aa		13.43	□□□□□ -0.26
LMNA-208	ENST00000448611	KLHDC1	Q8N7A1	406 aa		13.43	□□□□□ -0.26
LMNA-208	ENST00000448611	TMEM189	A5PLL7	270 aa		13.42	□□□□□ -0.26
LMNA-208	ENST00000448611		A8MWP6	167 aa		13.42	□□□□□ -0.26
LMNA-208	ENST00000448611	BMI1	P35226	326 aa		13.42	□□□□□ -0.26
LMNA-208	ENST00000448611		Q0VG73	95 aa		13.42	□□□□□ -0.26
LMNA-208	ENST00000448611	REC114	Q7Z4M0	266 aa		13.42	□□□□□ -0.26
LMNA-208	ENST00000448611	ESM1	Q9NQ30	184 aa		13.42	□□□□□ -0.26
LMNA-208	ENST00000448611	FOSL1	P15407	271 aa		13.41	□□□□□ -0.26
LMNA-208	ENST00000448611	ZNF138	P52744	262 aa		13.41	□□□□□ -0.26
LMNA-208	ENST00000448611	RPL11	P62913	178 aa	Known RBP	13.41	□□□□□ -0.26
LMNA-208	ENST00000448611	TMEM78	Q5T7P6	136 aa		13.41	□□□□□ -0.26
LMNA-208	ENST00000448611		Q6ZSV7	163 aa		13.41	□□□□□ -0.26
LMNA-208	ENST00000448611	PPP1R14D	Q9NXH3	145 aa		13.41	□□□□□ -0.26
LMNA-208	ENST00000448611	HIVEP1	P15822	2718 aa		13.41	□□□□□ -0.26
LMNA-208	ENST00000448611	HAX1	O00165	279 aa		13.41	□□□□□ -0.26
LMNA-208	ENST00000448611	LGALS9	O00182	355 aa		13.41	□□□□□ -0.26
LMNA-208	ENST00000448611	NUPR1	O60356	82 aa		13.41	□□□□□ -0.26
LMNA-208	ENST00000448611	LY6G6D	O95868	133 aa		13.41	□□□□□ -0.26
LMNA-208	ENST00000448611	LINC00310	P59036	64 aa		13.41	□□□□□ -0.26
LMNA-208	ENST00000448611		Q6AWC8	147 aa		13.41	□□□□□ -0.26
LMNA-208	ENST00000448611	ZNF738	Q8NE65	137 aa		13.41	□□□□□ -0.26
LMNA-208	ENST00000448611	PACRG	Q96M98	296 aa	Predicted RBP	13.41	□□□□□ -0.26
LMNA-208	ENST00000448611	SSBP4	Q9BWG4	385 aa	Predicted RBP	13.41	□□□□□ -0.26
LMNA-208	ENST00000448611	SRI	P30626	198 aa		13.4	□□□□□ -0.26
LMNA-208	ENST00000448611	HOXD3	P31249	432 aa	Predicted RBP	13.39	□□□□□ -0.27
LMNA-208	ENST00000448611	SYNJ2BP	P57105	145 aa		13.39	□□□□□ -0.27
LMNA-208	ENST00000448611	SRSF2	Q01130	221 aa	Known RBP	13.39	□□□□□ -0.27
LMNA-208	ENST00000448611	SELENOK	Q9Y6D0	94 aa		13.39	□□□□□ -0.27
LMNA-208	ENST00000448611		A0A1B0GUT8	65 aa		13.39	□□□□□ -0.27
LMNA-208	ENST00000448611	FABP5P3	A8MUU1	101 aa		13.39	□□□□□ -0.27
LMNA-208	ENST00000448611		F2Z2F3	143 aa		13.39	□□□□□ -0.27
LMNA-208	ENST00000448611	TCTEX1D4	Q5JR98	221 aa		13.39	□□□□□ -0.27
LMNA-208	ENST00000448611	OR10J3	Q5JRS4	329 aa		13.39	□□□□□ -0.27
LMNA-208	ENST00000448611	ZNF575	Q86XF7	245 aa		13.39	□□□□□ -0.27
LMNA-208	ENST00000448611	IGKV3-7	A0A075B6H7	116 aa		13.38	□□□□□ -0.27
LMNA-208	ENST00000448611	TMSB15B	A0A087X1C1	80 aa		13.38	□□□□□ -0.27
LMNA-208	ENST00000448611	OVOL1	O14753	267 aa		13.38	□□□□□ -0.27
LMNA-208	ENST00000448611	ARMS2	P0C7Q2	107 aa		13.38	□□□□□ -0.27
LMNA-208	ENST00000448611	ESD	P10768	282 aa		13.38	□□□□□ -0.27
LMNA-208	ENST00000448611	PYY3	Q5JQD4	70 aa		13.38	□□□□□ -0.27
LMNA-208	ENST00000448611	C18orf65	Q6ZTR6	163 aa		13.38	□□□□□ -0.27
LMNA-208	ENST00000448611	SON	P18583	2426 aa	Known RBP	13.38	□□□□□ -0.27
LMNA-208	ENST00000448611	ZNF705D	P0CH99	300 aa	Predicted RBP	13.37	□□□□□ -0.27
LMNA-208	ENST00000448611	ZNF705B	P0CI00	300 aa	Predicted RBP	13.37	□□□□□ -0.27
LMNA-208	ENST00000448611	RPS20	P60866	119 aa	Known RBP	13.37	□□□□□ -0.27
LMNA-208	ENST00000448611	DCANP1	Q8TF63	244 aa		13.37	□□□□□ -0.27
LMNA-208	ENST00000448611	SERF1A	O75920	110 aa		13.37	□□□□□ -0.27
LMNA-208	ENST00000448611	SRD5A1	P18405	259 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms