RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 F8WEM9 126 aa6.24□□□□□ -1.41
NEDD9-204ENST00000448183 TAL2Q16559 108 aa6.24□□□□□ -1.41
NEDD9-204ENST00000448183 OR11H6Q8NGC7 330 aa6.24□□□□□ -1.41
NEDD9-204ENST00000448183 SIGLEC8Q9NYZ4 499 aa6.24□□□□□ -1.41
NEDD9-204ENST00000448183 HEATR5AQ86XA9 2040 aa6.24□□□□□ -1.41
NEDD9-204ENST00000448183 A0A1W2PPM0 123 aa6.24□□□□□ -1.41
NEDD9-204ENST00000448183 DKK1O94907 266 aa6.24□□□□□ -1.41
NEDD9-204ENST00000448183 IL15RAQ13261 267 aa6.24□□□□□ -1.41
NEDD9-204ENST00000448183 Q6ZS92 163 aa6.24□□□□□ -1.41
NEDD9-204ENST00000448183 HAPLN4Q86UW8 402 aa6.24□□□□□ -1.41
NEDD9-204ENST00000448183 MRPL35Q9NZE8 188 aaKnown RBP6.24□□□□□ -1.41
NEDD9-204ENST00000448183 TMEM14CQ9P0S9 112 aa6.24□□□□□ -1.41
NEDD9-204ENST00000448183 SDHAF1A6NFY7 115 aa6.24□□□□□ -1.41
NEDD9-204ENST00000448183 F8VRH5 84 aa6.24□□□□□ -1.41
NEDD9-204ENST00000448183 DEFB131AP59861 70 aa6.24□□□□□ -1.41
NEDD9-204ENST00000448183 FGF6P10767 208 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 RPL35AP18077 110 aaKnown RBP6.23□□□□□ -1.41
NEDD9-204ENST00000448183 GATA4P43694 442 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 ZNF833PQ6ZTB9 187 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 SPANXDQ9BXN6 97 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 I3L3M4 83 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 HLA-DRB4P13762 266 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 PRO1854Q9UHT4 67 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 MSRB2Q9Y3D2 182 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 HLA-DRB4X5D2U9 266 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 PLCE1Q9P212 2302 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 KNCNA6PVL3 124 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 ATP6V0E1O15342 81 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 LY6HO94772 140 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 SYNJ2BPP57105 145 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 VWC2Q2TAL6 325 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 SMIM2Q9BVW6 85 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 E7EQL1 145 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 NPYP01303 97 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 WT1-ASQ06250 92 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 LY6DQ14210 128 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 UTF1Q5T230 341 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 Q8TCH9 128 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 RLFQ13129 1914 aa6.23□□□□□ -1.41
NEDD9-204ENST00000448183 GAGE12HA6NDE8 117 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 SIVA1O15304 175 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 MORN5Q5VZ52 161 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 KLHL30-AS1Q8NEE0 82 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 H3BRN7 92 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 Q6ZR03 302 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 LYPD6BQ8NI32 183 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 BPESC1Q9GZL8 116 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 NDUFA12Q9UI09 145 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 CDK2AP2O75956 126 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 C17orf58Q2M2W7 97 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 CEND1Q8N111 149 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 LINC00311Q8N616 119 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 MALRD1Q5VYJ5 2156 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 UBE2E1P51965 193 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 SPINK13Q1W4C9 94 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 C8orf86Q6ZUL3 223 aa6.22□□□□□ -1.41
NEDD9-204ENST00000448183 H3BMG7 143 aa6.21□□□□□ -1.41
NEDD9-204ENST00000448183 PRR20EP86478 221 aa6.21□□□□□ -1.41
NEDD9-204ENST00000448183 PRR20CP86479 221 aa6.21□□□□□ -1.41
NEDD9-204ENST00000448183 PRR20DP86480 221 aa6.21□□□□□ -1.41
NEDD9-204ENST00000448183 PRR20BP86481 221 aa6.21□□□□□ -1.41
NEDD9-204ENST00000448183 PRR20AP86496 221 aa6.21□□□□□ -1.41
NEDD9-204ENST00000448183 WDR86Q86TI4 376 aa6.21□□□□□ -1.41
NEDD9-204ENST00000448183 RNF166Q96A37 237 aaPredicted RBP6.21□□□□□ -1.41
NEDD9-204ENST00000448183 UBL5Q9BZL1 73 aa6.21□□□□□ -1.41
NEDD9-204ENST00000448183 K7EM74 188 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 DEFB130BP0DP73 79 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 DEFB130AP0DP74 79 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 COA6Q5JTJ3 125 aaKnown RBP6.21□□□□□ -1.42
NEDD9-204ENST00000448183 FXYD5Q96DB9 178 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 ZC2HC1AQ96GY0 325 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 IGHV1OR15-1A0A075B7D0 117 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 TRAV26-2A0A0B4J265 109 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 C15orf65H3BRN8 121 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 IFITM1P13164 125 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 RSPO1Q2MKA7 263 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-204ENST00000448183 ANXA2RQ3ZCQ2 193 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 SSC4DQ8WTU2 575 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 ATP6V0BQ99437 205 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 PYGO2Q9BRQ0 406 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 TCF20Q9UGU0 1960 aaKnown RBP6.21□□□□□ -1.42
NEDD9-204ENST00000448183 ARTNQ5T4W7 220 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 THAP8Q8NA92 274 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 VOPP1Q96AW1 172 aa6.21□□□□□ -1.42
NEDD9-204ENST00000448183 GAGE12JA6NER3 117 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 WISP1O95388 367 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 IGLC1P0CG04 106 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 LOXP28300 417 aaPredicted RBP6.2□□□□□ -1.42
NEDD9-204ENST00000448183 GAGE4Q13068 117 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 GAGE5Q13069 117 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 POU2AF1Q16633 256 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 SBF1O95248 1867 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 TRBV25-1A0A075B6N4 114 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 KIR2DL5BA0A0G2JN68 375 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 KIR2DL5BA0A0G2JPC4 375 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 WIPF3A6NGB9 483 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 J3QQQ9 107 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 NDUFS7O75251 213 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 HLA-DMBP28068 263 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 PFN2P35080 140 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms