RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 HOXA3O43365 443 aaPredicted RBP13.33□□□□□ -0.28
SMC6-206ENST00000446852 ZNF80P51504 273 aaPredicted RBP13.33□□□□□ -0.28
SMC6-206ENST00000446852 JOSD1Q15040 202 aaPredicted RBP13.33□□□□□ -0.28
SMC6-206ENST00000446852 OR10J3Q5JRS4 329 aa13.33□□□□□ -0.28
SMC6-206ENST00000446852 CYB5R2Q6BCY4 276 aa13.33□□□□□ -0.28
SMC6-206ENST00000446852 RCHY1Q96PM5 261 aa13.33□□□□□ -0.28
SMC6-206ENST00000446852 PSMG3-AS1Q96PY0 264 aa13.33□□□□□ -0.28
SMC6-206ENST00000446852 A8MWP6 167 aa13.33□□□□□ -0.28
SMC6-206ENST00000446852 FAM162BQ5T6X4 162 aa13.33□□□□□ -0.28
SMC6-206ENST00000446852 WFDC11Q8NEX6 87 aa13.33□□□□□ -0.28
SMC6-206ENST00000446852 NPFFR1Q9GZQ6 430 aa13.33□□□□□ -0.28
SMC6-206ENST00000446852 J3QKU1 62 aa13.32□□□□□ -0.28
SMC6-206ENST00000446852 FAM209BQ5JX69 171 aa13.32□□□□□ -0.28
SMC6-206ENST00000446852 GPHB5Q86YW7 130 aa13.32□□□□□ -0.28
SMC6-206ENST00000446852 RBAKDNA6NC62 111 aa13.31□□□□□ -0.28
SMC6-206ENST00000446852 S100A12P80511 92 aa13.31□□□□□ -0.28
SMC6-206ENST00000446852 C18orf32Q8TCD1 76 aa13.31□□□□□ -0.28
SMC6-206ENST00000446852 TMSB15BA0A087X1C1 80 aa13.31□□□□□ -0.28
SMC6-206ENST00000446852 HAX1O00165 279 aa13.31□□□□□ -0.28
SMC6-206ENST00000446852 ARMS2P0C7Q2 107 aa13.31□□□□□ -0.28
SMC6-206ENST00000446852 ZNF702PQ9H963 129 aa13.31□□□□□ -0.28
SMC6-206ENST00000446852 PEF1Q9UBV8 284 aaKnown RBP13.31□□□□□ -0.28
SMC6-206ENST00000446852 MYO9AB2RTY4 2548 aa13.31□□□□□ -0.28
SMC6-206ENST00000446852 SONP18583 2426 aaKnown RBP13.3□□□□□ -0.28
SMC6-206ENST00000446852 IQCJQ1A5X6 159 aa13.3□□□□□ -0.28
SMC6-206ENST00000446852 ALKBH7Q9BT30 221 aaPredicted RBP13.3□□□□□ -0.28
SMC6-206ENST00000446852 PRDM13Q9H4Q3 707 aa13.3□□□□□ -0.28
SMC6-206ENST00000446852 TM4SF20Q53R12 229 aa13.3□□□□□ -0.28
SMC6-206ENST00000446852 DNLZQ5SXM8 178 aa13.3□□□□□ -0.28
SMC6-206ENST00000446852 IL17RELQ6ZVW7 336 aa13.3□□□□□ -0.28
SMC6-206ENST00000446852 MRPL53Q96EL3 112 aaKnown RBP13.3□□□□□ -0.28
SMC6-206ENST00000446852 C16orf92Q96LL3 132 aa13.3□□□□□ -0.28
SMC6-206ENST00000446852 AGPAT4-IT1Q9H0P7 198 aa13.3□□□□□ -0.28
SMC6-206ENST00000446852 A0A1B0GUT8 65 aa13.29□□□□□ -0.28
SMC6-206ENST00000446852 TMEM189A5PLL7 270 aa13.29□□□□□ -0.28
SMC6-206ENST00000446852 RPLP1P05386 114 aaKnown RBP13.29□□□□□ -0.28
SMC6-206ENST00000446852 EDN2P20800 178 aa13.29□□□□□ -0.28
SMC6-206ENST00000446852 C20orf173Q96LM9 149 aa13.29□□□□□ -0.28
SMC6-206ENST00000446852 NDFIP1Q9BT67 221 aa13.29□□□□□ -0.28
SMC6-206ENST00000446852 TPPP3Q9BW30 176 aa13.29□□□□□ -0.28
SMC6-206ENST00000446852 UNC79Q9P2D8 2635 aa13.28□□□□□ -0.28
SMC6-206ENST00000446852 GCN1Q92616 2671 aaKnown RBP13.28□□□□□ -0.28
SMC6-206ENST00000446852 TMEM89A2RUT3 159 aa13.28□□□□□ -0.28
SMC6-206ENST00000446852 PAFAH1B2P68402 229 aa13.28□□□□□ -0.28
SMC6-206ENST00000446852 ZNF575Q86XF7 245 aa13.28□□□□□ -0.28
SMC6-206ENST00000446852 DAZ1Q9NQZ3 744 aaKnown RBP13.28□□□□□ -0.28
SMC6-206ENST00000446852 IGHV7-4-1A0A0J9YVY3 117 aa13.28□□□□□ -0.28
SMC6-206ENST00000446852 SOCS3O14543 225 aa13.28□□□□□ -0.28
SMC6-206ENST00000446852 KCNS1Q96KK3 526 aa13.28□□□□□ -0.28
SMC6-206ENST00000446852 DUX5Q96PT3 197 aa13.28□□□□□ -0.28
SMC6-206ENST00000446852 AKAP9Q99996 3911 aa13.28□□□□□ -0.28
SMC6-206ENST00000446852 A0A1W2PS18 150 aa13.27□□□□□ -0.29
SMC6-206ENST00000446852 Q6AWC8 147 aa13.27□□□□□ -0.29
SMC6-206ENST00000446852 Q6ZWC4 215 aa13.27□□□□□ -0.29
SMC6-206ENST00000446852 RHPN1-AS1Q9BWJ2 59 aa13.27□□□□□ -0.29
SMC6-206ENST00000446852 SELENOKQ9Y6D0 94 aa13.27□□□□□ -0.29
SMC6-206ENST00000446852 CD33P20138 364 aa13.27□□□□□ -0.29
SMC6-206ENST00000446852 KLF5Q13887 457 aaPredicted RBP13.27□□□□□ -0.29
SMC6-206ENST00000446852 BMI1P35226 326 aa13.26□□□□□ -0.29
SMC6-206ENST00000446852 LYZL1Q6UWQ5 148 aa13.26□□□□□ -0.29
SMC6-206ENST00000446852 SAMD10Q9BYL1 202 aa13.26□□□□□ -0.29
SMC6-206ENST00000446852 GPX1P07203 203 aa13.25□□□□□ -0.29
SMC6-206ENST00000446852 ZNF138P52744 262 aa13.25□□□□□ -0.29
SMC6-206ENST00000446852 C9orf47Q6ZRZ4 202 aa13.25□□□□□ -0.29
SMC6-206ENST00000446852 SIGLECL1Q8N7X8 197 aa13.25□□□□□ -0.29
SMC6-206ENST00000446852 LOC102724200A0A096LPH7 203 aaPredicted RBP13.25□□□□□ -0.29
SMC6-206ENST00000446852 ZNF705DP0CH99 300 aaPredicted RBP13.25□□□□□ -0.29
SMC6-206ENST00000446852 ZNF705BP0CI00 300 aaPredicted RBP13.25□□□□□ -0.29
SMC6-206ENST00000446852 RIGQ13278 110 aa13.25□□□□□ -0.29
SMC6-206ENST00000446852 TMEM78Q5T7P6 136 aa13.25□□□□□ -0.29
SMC6-206ENST00000446852 LINC00587B1AMM8 73 aa13.24□□□□□ -0.29
SMC6-206ENST00000446852 MYOZ3Q8TDC0 251 aa13.24□□□□□ -0.29
SMC6-206ENST00000446852 NRN1Q9NPD7 142 aa13.24□□□□□ -0.29
SMC6-206ENST00000446852 CLEC5AQ9NY25 188 aa13.24□□□□□ -0.29
SMC6-206ENST00000446852 SMPXQ9UHP9 88 aa13.24□□□□□ -0.29
SMC6-206ENST00000446852 FABP5P3A8MUU1 101 aa13.24□□□□□ -0.29
SMC6-206ENST00000446852 RPL11P62913 178 aaKnown RBP13.24□□□□□ -0.29
SMC6-206ENST00000446852 FAM106AQ4KMX7 169 aa13.24□□□□□ -0.29
SMC6-206ENST00000446852 GATD1Q8NB37 220 aa13.24□□□□□ -0.29
SMC6-206ENST00000446852 ZNF738Q8NE65 137 aa13.24□□□□□ -0.29
SMC6-206ENST00000446852 RNF114Q9Y508 228 aa13.24□□□□□ -0.29
SMC6-206ENST00000446852 IGKV3-7A0A075B6H7 116 aa13.23□□□□□ -0.29
SMC6-206ENST00000446852 K7EMT4 169 aa13.23□□□□□ -0.29
SMC6-206ENST00000446852 PMCHP20382 165 aa13.23□□□□□ -0.29
SMC6-206ENST00000446852 FOXE3Q13461 319 aa13.23□□□□□ -0.29
SMC6-206ENST00000446852 CUBNO60494 3623 aa13.23□□□□□ -0.29
SMC6-206ENST00000446852 NF1P21359 2839 aa13.23□□□□□ -0.29
SMC6-206ENST00000446852 ZNF324O75467 553 aaPredicted RBP13.23□□□□□ -0.29
SMC6-206ENST00000446852 ORM1P02763 201 aa13.23□□□□□ -0.29
SMC6-206ENST00000446852 AMTP48728 403 aa13.23□□□□□ -0.29
SMC6-206ENST00000446852 DEFB1P60022 68 aa13.23□□□□□ -0.29
SMC6-206ENST00000446852 ACANP16112 2415 aa13.23□□□□□ -0.29
SMC6-206ENST00000446852 MUC21A0A0G2JKD1 596 aa13.22□□□□□ -0.29
SMC6-206ENST00000446852 MUC21A0A140T8X8 626 aa13.22□□□□□ -0.29
SMC6-206ENST00000446852 IGLC6P0CF74 106 aa13.22□□□□□ -0.29
SMC6-206ENST00000446852 SSTP61278 116 aa13.22□□□□□ -0.29
SMC6-206ENST00000446852 SRSF2Q01130 221 aaKnown RBP13.22□□□□□ -0.29
SMC6-206ENST00000446852 MUC21Q5SSG8 566 aa13.22□□□□□ -0.29
SMC6-206ENST00000446852 FAM19A2Q8N3H0 131 aa13.22□□□□□ -0.29
SMC6-206ENST00000446852 A0A1B0GW15 77 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms