RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 MRPS10P82664 201 aaKnown RBP3.9□□□□□ -1.79
HMGN1P36-201ENST00000446623 SPANXN5Q5MJ07 72 aa3.9□□□□□ -1.79
HMGN1P36-201ENST00000446623 LCN15Q6UWW0 184 aa3.9□□□□□ -1.79
HMGN1P36-201ENST00000446623 PATE2Q6UY27 113 aa3.9□□□□□ -1.79
HMGN1P36-201ENST00000446623 ZNF680Q8NEM1 530 aa3.9□□□□□ -1.79
HMGN1P36-201ENST00000446623 ZNF431Q8TF32 576 aaPredicted RBP3.9□□□□□ -1.79
HMGN1P36-201ENST00000446623 SCGB3A2Q96PL1 93 aa3.9□□□□□ -1.79
HMGN1P36-201ENST00000446623 PYGO2Q9BRQ0 406 aa3.9□□□□□ -1.79
HMGN1P36-201ENST00000446623 ARL6Q9H0F7 186 aa3.9□□□□□ -1.79
HMGN1P36-201ENST00000446623 ZNF331Q9NQX6 463 aaPredicted RBP3.9□□□□□ -1.79
HMGN1P36-201ENST00000446623 PIGBOS1A0A0B4J2F0 54 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 ANKRD20A5PA0PJZ0 165 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 LRCOL1A6NCL2 159 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 K7EP13 123 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 SPINK4O60575 86 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 IGHV3-53P01767 116 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 EVI2AP22794 236 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 LEPP41159 167 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 CRYBA4P53673 196 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 MRPL23Q16540 153 aaKnown RBP3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 NEGR1Q7Z3B1 354 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 S100A7AQ86SG5 101 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 WFDC10BQ8IUB3 73 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 LRTM2Q8N967 370 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 ZBTB8BQ8NAP8 495 aaPredicted RBP3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 PRSS3P2Q8NHM4 247 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 ST6GAL2Q96JF0 529 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 ODF3Q96PU9 254 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 SLC50A1Q9BRV3 221 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 ARV1Q9H2C2 271 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 MCUBQ9NWR8 336 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 MGAT4CQ9UBM8 478 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 PRO0255Q9UI72 69 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 SCP2D1Q9UJQ7 156 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 STRAPQ9Y3F4 350 aaKnown RBP3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 KLF12Q9Y4X4 402 aa3.89□□□□□ -1.79
HMGN1P36-201ENST00000446623 H3BQ15 152 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 K7EPK0 472 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 CTDSP2O14595 271 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 CTDSPLO15194 276 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 RGS5O15539 181 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 PRAF2O60831 178 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 SLC25A5P05141 298 aaKnown RBP3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 IGKV2-30P06310 120 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 CRYGDP07320 174 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 IGLC2P0DOY2 106 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 TIRAPP58753 221 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 CTF1Q16619 201 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 ANXA2RQ3ZCQ2 193 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 LINC00305Q7Z4B0 112 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 BPIFA4PQ86YQ2 179 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 EIF4E3Q8N5X7 224 aaKnown RBP3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 Q8N814 137 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 Q8N9P0 234 aaPredicted RBP3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 DEFB104AQ8WTQ1 72 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 NAA50Q9GZZ1 169 aaKnown RBP3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 MRPL16Q9NX20 251 aaKnown RBP3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 RABL2BQ9UNT1 228 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 HHLA3Q9XRX5 114 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 RNF24Q9Y225 148 aa3.88□□□□□ -1.79
HMGN1P36-201ENST00000446623 C7orf71A4D174 169 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 KLLNB2CW77 178 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 E5RGE8 158 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 PSCAO43653 123 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 CCNKO75909 580 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 C1QBP02746 253 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 HOXB5P09067 269 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 SRIP30626 198 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 RNASE4P34096 147 aaKnown RBP3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 TCL1AP56279 114 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 RRAS2P62070 204 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 CD300CQ08708 224 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 SLC38A11Q08AI6 406 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 SLAQ13239 276 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 BTN1A1Q13410 526 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 IL18Q14116 193 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 OPCMLQ14982 345 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 C4orf46Q504U0 113 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 TMEM128Q5BJH2 165 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 PXDC1Q5TGL8 231 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 C10orf126Q8N4M7 172 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 TMEM37Q8WXS4 190 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 SAT2Q96F10 170 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 DIRAS2Q96HU8 199 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 VGLL1Q99990 258 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 CCDC59Q9P031 241 aaKnown RBP3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 RCL1Q9Y2P8 373 aaKnown RBP3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 PXMP4Q9Y6I8 212 aa3.87□□□□□ -1.79
HMGN1P36-201ENST00000446623 FNDC10F2Z333 226 aa3.86□□□□□ -1.79
HMGN1P36-201ENST00000446623 K7EQD1 137 aa3.86□□□□□ -1.79
HMGN1P36-201ENST00000446623 GOSR2O14653 212 aa3.86□□□□□ -1.79
HMGN1P36-201ENST00000446623 SSSCA1O60232 199 aa3.86□□□□□ -1.79
HMGN1P36-201ENST00000446623 COX7A2P2O60397 106 aa3.86□□□□□ -1.79
HMGN1P36-201ENST00000446623 MPDU1O75352 247 aa3.86□□□□□ -1.79
HMGN1P36-201ENST00000446623 METTL15P1P0C7V9 234 aa3.86□□□□□ -1.79
HMGN1P36-201ENST00000446623 POLR2GP62487 172 aaKnown RBP eCLIP3.86□□□□□ -1.79
HMGN1P36-201ENST00000446623 ZNF415Q09FC8 603 aa3.86□□□□□ -1.79
HMGN1P36-201ENST00000446623 ERCC8Q13216 396 aa3.86□□□□□ -1.79
HMGN1P36-201ENST00000446623 GUK1Q16774 197 aa3.86□□□□□ -1.79
HMGN1P36-201ENST00000446623 IBA57Q5T440 356 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms