RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 PHLDA1Q8WV24 401 aaPredicted RBP17.22■□□□□ 0.35
C9orf3-207ENST00000445181 ZNF471Q9BX82 626 aaPredicted RBP17.22■□□□□ 0.35
C9orf3-207ENST00000445181 AGPAT4-IT1Q9H0P7 198 aa17.22■□□□□ 0.35
C9orf3-207ENST00000445181 OTORQ9NRC9 128 aa17.22■□□□□ 0.35
C9orf3-207ENST00000445181 PGPA6NDG6 321 aa17.21■□□□□ 0.35
C9orf3-207ENST00000445181 ZNF705GA8MUZ8 300 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-207ENST00000445181 CXorf1O96002 111 aa17.21■□□□□ 0.35
C9orf3-207ENST00000445181 HTN1P15515 57 aa17.21■□□□□ 0.35
C9orf3-207ENST00000445181 GCHFRP30047 84 aa17.21■□□□□ 0.35
C9orf3-207ENST00000445181 KIR3DS1Q14943 382 aa17.21■□□□□ 0.35
C9orf3-207ENST00000445181 CEMP1Q6PRD7 247 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-207ENST00000445181 C9orf47Q6ZRZ4 202 aa17.21■□□□□ 0.35
C9orf3-207ENST00000445181 TCTE3Q8IZS6 198 aa17.21■□□□□ 0.35
C9orf3-207ENST00000445181 RXFP4Q8TDU9 374 aa17.21■□□□□ 0.35
C9orf3-207ENST00000445181 VGLL1Q99990 258 aa17.21■□□□□ 0.35
C9orf3-207ENST00000445181 DNAH1Q9P2D7 4330 aa17.2■□□□□ 0.34
C9orf3-207ENST00000445181 GFI1BQ5VTD9 330 aa17.2■□□□□ 0.34
C9orf3-207ENST00000445181 RPH3ALQ9UNE2 315 aa17.2■□□□□ 0.34
C9orf3-207ENST00000445181 CELA1Q9UNI1 258 aa17.2■□□□□ 0.34
C9orf3-207ENST00000445181 CTXND1A0A1B0GTU2 59 aa17.19■□□□□ 0.34
C9orf3-207ENST00000445181 TMUB2Q71RG4 321 aa17.19■□□□□ 0.34
C9orf3-207ENST00000445181 SSX7Q7RTT5 188 aa17.19■□□□□ 0.34
C9orf3-207ENST00000445181 C20orf144Q9BQM9 153 aa17.19■□□□□ 0.34
C9orf3-207ENST00000445181 TMEM167BQ9NRX6 74 aa17.19■□□□□ 0.34
C9orf3-207ENST00000445181 KLK5Q9Y337 293 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-207ENST00000445181 PRM2P04554 102 aa17.18■□□□□ 0.34
C9orf3-207ENST00000445181 SPART-AS1P0CW21 52 aa17.18■□□□□ 0.34
C9orf3-207ENST00000445181 TAS2R60P59551 318 aa17.18■□□□□ 0.34
C9orf3-207ENST00000445181 AKAP14Q86UN6 197 aa17.18■□□□□ 0.34
C9orf3-207ENST00000445181 TRAV12-3A0A0B4J271 114 aa17.17■□□□□ 0.34
C9orf3-207ENST00000445181 RBAKDNA6NC62 111 aa17.17■□□□□ 0.34
C9orf3-207ENST00000445181 DIRC3C9JPN6 131 aa17.17■□□□□ 0.34
C9orf3-207ENST00000445181 H7BYZ3 331 aa17.17■□□□□ 0.34
C9orf3-207ENST00000445181 SLC25A5P05141 298 aaKnown RBP17.17■□□□□ 0.34
C9orf3-207ENST00000445181 EIF5AP63241 154 aaKnown RBP17.17■□□□□ 0.34
C9orf3-207ENST00000445181 ZNF726P1Q15940 193 aa17.17■□□□□ 0.34
C9orf3-207ENST00000445181 ZNF767PQ75MW2 155 aa17.17■□□□□ 0.34
C9orf3-207ENST00000445181 NIPSNAP3BQ9BS92 247 aa17.17■□□□□ 0.34
C9orf3-207ENST00000445181 YTHDF2Q9Y5A9 579 aaKnown RBP17.17■□□□□ 0.34
C9orf3-207ENST00000445181 GPX1P07203 203 aa17.16■□□□□ 0.34
C9orf3-207ENST00000445181 ZNF138P52744 262 aa17.16■□□□□ 0.34
C9orf3-207ENST00000445181 Q6ZTC4 211 aa17.16■□□□□ 0.34
C9orf3-207ENST00000445181 Q8TAT8 98 aa17.16■□□□□ 0.34
C9orf3-207ENST00000445181 ZNF492Q9P255 531 aa17.16■□□□□ 0.34
C9orf3-207ENST00000445181 TEX48A0A1B0GUV7 120 aa17.15■□□□□ 0.34
C9orf3-207ENST00000445181 C7orf71A4D174 169 aa17.15■□□□□ 0.34
C9orf3-207ENST00000445181 RNASE4P34096 147 aaKnown RBP17.15■□□□□ 0.34
C9orf3-207ENST00000445181 FAM222AQ5U5X8 452 aa17.15■□□□□ 0.34
C9orf3-207ENST00000445181 SUN5Q8TC36 379 aa17.15■□□□□ 0.34
C9orf3-207ENST00000445181 LINC00476Q8WZB0 136 aa17.15■□□□□ 0.34
C9orf3-207ENST00000445181 FAM19A4Q96LR4 140 aa17.15■□□□□ 0.34
C9orf3-207ENST00000445181 C11orf94C9JXX5 98 aa17.14■□□□□ 0.33
C9orf3-207ENST00000445181 C1QBP02746 253 aa17.14■□□□□ 0.33
C9orf3-207ENST00000445181 SEC11BP0C7V7 166 aa17.14■□□□□ 0.33
C9orf3-207ENST00000445181 AZU1P20160 251 aa17.14■□□□□ 0.33
C9orf3-207ENST00000445181 C12orf74Q32Q52 190 aa17.14■□□□□ 0.33
C9orf3-207ENST00000445181 DKK2Q9UBU2 259 aa17.14■□□□□ 0.33
C9orf3-207ENST00000445181 PLECQ15149 4684 aaKnown RBP17.14■□□□□ 0.33
C9orf3-207ENST00000445181 KLLNB2CW77 178 aa17.13■□□□□ 0.33
C9orf3-207ENST00000445181 TPT1P13693 172 aaKnown RBP17.13■□□□□ 0.33
C9orf3-207ENST00000445181 CRISP2P16562 243 aa17.13■□□□□ 0.33
C9orf3-207ENST00000445181 FGF8P55075 233 aaPredicted RBP17.13■□□□□ 0.33
C9orf3-207ENST00000445181 GNG5P63218 68 aa17.13■□□□□ 0.33
C9orf3-207ENST00000445181 BTN1A1Q13410 526 aa17.13■□□□□ 0.33
C9orf3-207ENST00000445181 GOLT1AQ6ZVE7 132 aa17.13■□□□□ 0.33
C9orf3-207ENST00000445181 CCDC28AQ8IWP9 274 aa17.13■□□□□ 0.33
C9orf3-207ENST00000445181 C16orf74Q96GX8 76 aa17.13■□□□□ 0.33
C9orf3-207ENST00000445181 ALMS1Q8TCU4 4167 aa17.12■□□□□ 0.33
C9orf3-207ENST00000445181 TRAV10A0A0B4J240 114 aa17.12■□□□□ 0.33
C9orf3-207ENST00000445181 MAP1LC3B2A6NCE7 125 aa17.12■□□□□ 0.33
C9orf3-207ENST00000445181 LY6G6CO95867 125 aa17.12■□□□□ 0.33
C9orf3-207ENST00000445181 NMBP08949 121 aa17.12■□□□□ 0.33
C9orf3-207ENST00000445181 CD300CQ08708 224 aa17.12■□□□□ 0.33
C9orf3-207ENST00000445181 ARL6IP6Q8N6S5 226 aa17.12■□□□□ 0.33
C9orf3-207ENST00000445181 C2CD4CQ8TF44 421 aa17.12■□□□□ 0.33
C9orf3-207ENST00000445181 MAP1LC3BQ9GZQ8 125 aa17.12■□□□□ 0.33
C9orf3-207ENST00000445181 TMPRSS5Q9H3S3 457 aa17.12■□□□□ 0.33
C9orf3-207ENST00000445181 UMAD1C9J7I0 102 aa17.11■□□□□ 0.33
C9orf3-207ENST00000445181 LGALSLQ3ZCW2 172 aaPredicted RBP17.11■□□□□ 0.33
C9orf3-207ENST00000445181 C5orf17Q8NAS9 161 aa17.11■□□□□ 0.33
C9orf3-207ENST00000445181 STOML3Q8TAV4 291 aa17.11■□□□□ 0.33
C9orf3-207ENST00000445181 TRBV7-9A0A0J9YWB2 115 aa17.1■□□□□ 0.33
C9orf3-207ENST00000445181 FHITP49789 147 aa17.1■□□□□ 0.33
C9orf3-207ENST00000445181 SUMO1P63165 101 aaKnown RBP17.1■□□□□ 0.33
C9orf3-207ENST00000445181 ZNF493Q6ZR52 646 aa17.1■□□□□ 0.33
C9orf3-207ENST00000445181 ZFAND2AQ8N6M9 145 aa17.1■□□□□ 0.33
C9orf3-207ENST00000445181 FAM213BQ8TBF2 198 aa17.1■□□□□ 0.33
C9orf3-207ENST00000445181 TMEM263Q8WUH6 116 aaKnown RBP17.1■□□□□ 0.33
C9orf3-207ENST00000445181 PYGO2Q9BRQ0 406 aa17.1■□□□□ 0.33
C9orf3-207ENST00000445181 UBE2G2P60604 165 aa17.09■□□□□ 0.33
C9orf3-207ENST00000445181 DAD1P61803 113 aa17.09■□□□□ 0.33
C9orf3-207ENST00000445181 TMED6Q8WW62 240 aa17.09■□□□□ 0.33
C9orf3-207ENST00000445181 PLA2G2EQ9NZK7 142 aa17.09■□□□□ 0.33
C9orf3-207ENST00000445181 DEFB131BA0A096LNP1 70 aa17.08■□□□□ 0.32
C9orf3-207ENST00000445181 A0A1W2PRE2 83 aa17.08■□□□□ 0.32
C9orf3-207ENST00000445181 LYRM9A8MSI8 78 aa17.08■□□□□ 0.32
C9orf3-207ENST00000445181 GGTLC3B5MD39 225 aa17.08■□□□□ 0.32
C9orf3-207ENST00000445181 K7EQM0 130 aa17.08■□□□□ 0.32
C9orf3-207ENST00000445181 PRR9Q5T870 116 aa17.08■□□□□ 0.32
C9orf3-207ENST00000445181 LENEPQ9Y5L5 61 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms