RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 TMEM14CQ9P0S9 112 aa6.95□□□□□ -1.3
LINC00642-203ENST00000444942 UFC1Q9Y3C8 167 aa6.95□□□□□ -1.3
LINC00642-203ENST00000444942 DNAH11Q96DT5 4516 aa6.94□□□□□ -1.3
LINC00642-203ENST00000444942 IGKV3-7A0A075B6H7 116 aa6.94□□□□□ -1.3
LINC00642-203ENST00000444942 A8MWP6 167 aa6.94□□□□□ -1.3
LINC00642-203ENST00000444942 PEX7O00628 323 aa6.94□□□□□ -1.3
LINC00642-203ENST00000444942 IL4P05112 153 aa6.94□□□□□ -1.3
LINC00642-203ENST00000444942 SLC25A5P05141 298 aaKnown RBP6.94□□□□□ -1.3
LINC00642-203ENST00000444942 PFN1P07737 140 aaKnown RBP6.94□□□□□ -1.3
LINC00642-203ENST00000444942 NBEAP1P0C6P0 100 aa6.94□□□□□ -1.3
LINC00642-203ENST00000444942 S100A7P31151 101 aa6.94□□□□□ -1.3
LINC00642-203ENST00000444942 TAS2R60P59551 318 aa6.94□□□□□ -1.3
LINC00642-203ENST00000444942 LCN12Q6JVE5 192 aa6.94□□□□□ -1.3
LINC00642-203ENST00000444942 TOMM20LQ6UXN7 152 aa6.94□□□□□ -1.3
LINC00642-203ENST00000444942 OCC1Q8TAD7 63 aa6.94□□□□□ -1.3
LINC00642-203ENST00000444942 BLNKQ8WV28 456 aa6.94□□□□□ -1.3
LINC00642-203ENST00000444942 IMMP2LQ96T52 175 aa6.94□□□□□ -1.3
LINC00642-203ENST00000444942 MRPL27Q9P0M9 148 aaKnown RBP6.94□□□□□ -1.3
LINC00642-203ENST00000444942 RNF24Q9Y225 148 aa6.94□□□□□ -1.3
LINC00642-203ENST00000444942 VPS13DQ5THJ4 4388 aa6.93□□□□□ -1.3
LINC00642-203ENST00000444942 A0A1W2PPQ1 181 aa6.93□□□□□ -1.3
LINC00642-203ENST00000444942 APOHP02749 345 aaPredicted RBP6.93□□□□□ -1.3
LINC00642-203ENST00000444942 CD7P09564 240 aa6.93□□□□□ -1.3
LINC00642-203ENST00000444942 HIST1H1EP10412 219 aaKnown RBP6.93□□□□□ -1.3
LINC00642-203ENST00000444942 FCGR2BP31994 310 aaPredicted RBP6.93□□□□□ -1.3
LINC00642-203ENST00000444942 RANP62826 216 aaKnown RBP6.93□□□□□ -1.3
LINC00642-203ENST00000444942 ZNF600Q6ZNG1 722 aa6.93□□□□□ -1.3
LINC00642-203ENST00000444942 BPIFA4PQ86YQ2 179 aa6.93□□□□□ -1.3
LINC00642-203ENST00000444942 TMEM61Q8N0U2 210 aa6.93□□□□□ -1.3
LINC00642-203ENST00000444942 PYGO2Q9BRQ0 406 aa6.93□□□□□ -1.3
LINC00642-203ENST00000444942 SHANK2-AS3Q9BTD1 123 aa6.93□□□□□ -1.3
LINC00642-203ENST00000444942 WFDC10AQ9H1F0 79 aa6.93□□□□□ -1.3
LINC00642-203ENST00000444942 DAZ1Q9NQZ3 744 aaKnown RBP6.93□□□□□ -1.3
LINC00642-203ENST00000444942 SIGLEC8Q9NYZ4 499 aa6.93□□□□□ -1.3
LINC00642-203ENST00000444942 HSPG2P98160 4391 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 IGHV7-4-1A0A0J9YVY3 117 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 ZNF785A8K8V0 405 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 K7EN84 100 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 S100A9P06702 114 aaKnown RBP6.92□□□□□ -1.3
LINC00642-203ENST00000444942 TFPI2P48307 235 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 UBE2G1P62253 170 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 LEMD1Q68G75 181 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 RBPMS2Q6ZRY4 209 aaKnown RBP6.92□□□□□ -1.3
LINC00642-203ENST00000444942 GTSCR1Q86UQ5 136 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 C5orf17Q8NAS9 161 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 IGF2BP2-AS1Q96M15 143 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 ATP6V0BQ99437 205 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 Q9H3A6 140 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 SRD5A3Q9H8P0 318 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 ZFAND3Q9H8U3 227 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 SMPXQ9UHP9 88 aa6.92□□□□□ -1.3
LINC00642-203ENST00000444942 TRAV9-1A0A075B6T8 112 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 PGPA6NDG6 321 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 K7EMT4 169 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 CHEK1O14757 476 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 TRGC2P03986 189 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 MGST1P10620 155 aaKnown RBP6.91□□□□□ -1.3
LINC00642-203ENST00000444942 FAM3BP58499 235 aaPredicted RBP6.91□□□□□ -1.3
LINC00642-203ENST00000444942 ERVFC1-1P60608 527 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 SNRPEP62304 92 aaKnown RBP6.91□□□□□ -1.3
LINC00642-203ENST00000444942 RPL11P62913 178 aaKnown RBP6.91□□□□□ -1.3
LINC00642-203ENST00000444942 GNG5P63218 68 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 WFDC3Q8IUB2 231 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 Q8N1Y9 231 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 GBGT1Q8N5D6 347 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 OR2K2Q8NGT1 345 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 CMTM2Q8TAZ6 248 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 ATG101Q9BSB4 218 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 RHPN1-AS1Q9BWJ2 59 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 OTORQ9NRC9 128 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 OSTCQ9NRP0 149 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 IL36BQ9NZH7 164 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 EPDR1Q9UM22 224 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 RPH3ALQ9UNE2 315 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 FAT2Q9NYQ8 4349 aa6.91□□□□□ -1.3
LINC00642-203ENST00000444942 C5orf52A6NGY3 159 aa6.9□□□□□ -1.31
LINC00642-203ENST00000444942 ZNF98A6NK75 572 aa6.9□□□□□ -1.31
LINC00642-203ENST00000444942 GCGP01275 180 aa6.9□□□□□ -1.31
LINC00642-203ENST00000444942 TYMSP04818 313 aa6.9□□□□□ -1.31
LINC00642-203ENST00000444942 SNRPCP09234 159 aaKnown RBP6.9□□□□□ -1.31
LINC00642-203ENST00000444942 IGHV4-30-4P0DP06 118 aa6.9□□□□□ -1.31
LINC00642-203ENST00000444942 AKR1D1P51857 326 aa6.9□□□□□ -1.31
LINC00642-203ENST00000444942 USF2Q15853 346 aaPredicted RBP6.9□□□□□ -1.31
LINC00642-203ENST00000444942 TMEM183BQ1AE95 376 aa6.9□□□□□ -1.31
LINC00642-203ENST00000444942 DEFB125Q8N687 156 aa6.9□□□□□ -1.31
LINC00642-203ENST00000444942 SMIM12Q96EX1 92 aa6.9□□□□□ -1.31
LINC00642-203ENST00000444942 FMC1Q96HJ9 113 aa6.9□□□□□ -1.31
LINC00642-203ENST00000444942 ZNF586Q9NXT0 402 aa6.9□□□□□ -1.31
LINC00642-203ENST00000444942 RABAC1Q9UI14 185 aa6.9□□□□□ -1.31
LINC00642-203ENST00000444942 H3BTX0 84 aa6.89□□□□□ -1.31
LINC00642-203ENST00000444942 UBE2CO00762 179 aa6.89□□□□□ -1.31
LINC00642-203ENST00000444942 ISLRO14498 428 aa6.89□□□□□ -1.31
LINC00642-203ENST00000444942 IGLV2-8P01709 118 aa6.89□□□□□ -1.31
LINC00642-203ENST00000444942 TCRAP04437 139 aa6.89□□□□□ -1.31
LINC00642-203ENST00000444942 IGLC2P0DOY2 106 aa6.89□□□□□ -1.31
LINC00642-203ENST00000444942 RPL19P84098 196 aaKnown RBP6.89□□□□□ -1.31
LINC00642-203ENST00000444942 OR5I1Q13606 314 aa6.89□□□□□ -1.31
LINC00642-203ENST00000444942 IBA57Q5T440 356 aaKnown RBP6.89□□□□□ -1.31
LINC00642-203ENST00000444942 TCF24Q7RTU0 167 aa6.89□□□□□ -1.31
LINC00642-203ENST00000444942 BAGE2Q86Y30 109 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms