RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 KIR2DL5BA0A0G2JN68 375 aa11.61□□□□□ -0.55
USP40-206ENST00000443711 KIR2DL5BA0A0G2JPC4 375 aa11.61□□□□□ -0.55
USP40-206ENST00000443711 APOC4P55056 127 aa11.61□□□□□ -0.55
USP40-206ENST00000443711 MEF2BQ02080 365 aaPredicted RBP11.61□□□□□ -0.55
USP40-206ENST00000443711 KIR2DL5AQ8N109 375 aa11.61□□□□□ -0.55
USP40-206ENST00000443711 CYB561D1Q8N8Q1 229 aa11.61□□□□□ -0.55
USP40-206ENST00000443711 KIR2DL5BQ8NHK3 375 aa11.61□□□□□ -0.55
USP40-206ENST00000443711 VGLL1Q99990 258 aa11.61□□□□□ -0.55
USP40-206ENST00000443711 FBLL1A6NHQ2 334 aaKnown RBP11.6□□□□□ -0.55
USP40-206ENST00000443711 RGS13O14921 159 aa11.6□□□□□ -0.55
USP40-206ENST00000443711 ZNF506Q5JVG8 444 aa11.6□□□□□ -0.55
USP40-206ENST00000443711 FAM210AQ96ND0 272 aa11.6□□□□□ -0.55
USP40-206ENST00000443711 RARRES2Q99969 163 aa11.6□□□□□ -0.55
USP40-206ENST00000443711 EIF5A2Q9GZV4 153 aaKnown RBP11.6□□□□□ -0.55
USP40-206ENST00000443711 CSTL1Q9H114 145 aa11.6□□□□□ -0.55
USP40-206ENST00000443711 PDE6DO43924 150 aa11.59□□□□□ -0.55
USP40-206ENST00000443711 CT45A10P0DMU9 189 aa11.59□□□□□ -0.55
USP40-206ENST00000443711 TSPOP30536 169 aa11.59□□□□□ -0.55
USP40-206ENST00000443711 ZNF138P52744 262 aa11.59□□□□□ -0.55
USP40-206ENST00000443711 TOR2AQ5JU69 321 aa11.59□□□□□ -0.55
USP40-206ENST00000443711 AMTNQ6UX39 209 aa11.59□□□□□ -0.55
USP40-206ENST00000443711 TMEM75Q8N9X5 138 aa11.59□□□□□ -0.55
USP40-206ENST00000443711 ODF3Q96PU9 254 aa11.59□□□□□ -0.55
USP40-206ENST00000443711 ZNF492Q9P255 531 aa11.59□□□□□ -0.55
USP40-206ENST00000443711 UBE2CO00762 179 aa11.58□□□□□ -0.56
USP40-206ENST00000443711 AMBPP02760 352 aa11.58□□□□□ -0.56
USP40-206ENST00000443711 LEPP41159 167 aa11.58□□□□□ -0.56
USP40-206ENST00000443711 SLC35B3Q9H1N7 401 aa11.58□□□□□ -0.56
USP40-206ENST00000443711 TRBV7-9A0A0J9YWB2 115 aa11.57□□□□□ -0.56
USP40-206ENST00000443711 SCO2A0A1W2PP80 73 aa11.57□□□□□ -0.56
USP40-206ENST00000443711 S100A9P06702 114 aaKnown RBP11.57□□□□□ -0.56
USP40-206ENST00000443711 AKR1C3P42330 323 aa11.57□□□□□ -0.56
USP40-206ENST00000443711 FXYD7P58549 80 aa11.57□□□□□ -0.56
USP40-206ENST00000443711 FLI1Q01543 452 aaPredicted RBP11.57□□□□□ -0.56
USP40-206ENST00000443711 C11orf52Q96A22 123 aa11.57□□□□□ -0.56
USP40-206ENST00000443711 LINC00479Q96M42 142 aa11.57□□□□□ -0.56
USP40-206ENST00000443711 C1QTNF4Q9BXJ3 329 aa11.57□□□□□ -0.56
USP40-206ENST00000443711 PSG8Q9UQ74 426 aa11.57□□□□□ -0.56
USP40-206ENST00000443711 KLF12Q9Y4X4 402 aa11.57□□□□□ -0.56
USP40-206ENST00000443711 LENEPQ9Y5L5 61 aa11.57□□□□□ -0.56
USP40-206ENST00000443711 TRAV8-1A0A0A6YYK1 113 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 TRAV34A0A0B4J273 112 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 M0R2Z0 102 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 NDUFS6O75380 124 aaKnown RBP11.56□□□□□ -0.56
USP40-206ENST00000443711 CA1P00915 261 aaPredicted RBP11.56□□□□□ -0.56
USP40-206ENST00000443711 IGLV2-11P01706 119 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 UBE2G1P62253 170 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 PEA15Q15121 130 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 SPINK13Q1W4C9 94 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 Q8TAT8 98 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 C2CD4CQ8TF44 421 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 FMC1Q96HJ9 113 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 FAM19A4Q96LR4 140 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 SGK494Q96LW2 274 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 NDFIP1Q9BT67 221 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 MED9Q9NWA0 146 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 XCL2Q9UBD3 114 aa11.56□□□□□ -0.56
USP40-206ENST00000443711 TRBV6-1A0A0K0K1D8 114 aa11.55□□□□□ -0.56
USP40-206ENST00000443711 GIG44P09565 113 aaPredicted RBP11.55□□□□□ -0.56
USP40-206ENST00000443711 CRISP2P16562 243 aa11.55□□□□□ -0.56
USP40-206ENST00000443711 CDKN1BP46527 198 aa11.55□□□□□ -0.56
USP40-206ENST00000443711 TMEM183BQ1AE95 376 aa11.55□□□□□ -0.56
USP40-206ENST00000443711 PRNTQ86SH4 94 aa11.55□□□□□ -0.56
USP40-206ENST00000443711 TMEM250H0YL14 139 aa11.54□□□□□ -0.56
USP40-206ENST00000443711 SAPCD1Q5SSQ6 148 aa11.54□□□□□ -0.56
USP40-206ENST00000443711 Q6ZWC4 215 aa11.54□□□□□ -0.56
USP40-206ENST00000443711 SBSPONQ8IVN8 264 aa11.54□□□□□ -0.56
USP40-206ENST00000443711 B9D2Q9BPU9 175 aa11.54□□□□□ -0.56
USP40-206ENST00000443711 SMDT1Q9H4I9 107 aa11.54□□□□□ -0.56
USP40-206ENST00000443711 TREM1Q9NP99 234 aa11.54□□□□□ -0.56
USP40-206ENST00000443711 ZFP30Q9Y2G7 519 aa11.54□□□□□ -0.56
USP40-206ENST00000443711 MEGF8Q7Z7M0 2845 aa11.54□□□□□ -0.56
USP40-206ENST00000443711 RAB19A4D1S5 217 aa11.53□□□□□ -0.56
USP40-206ENST00000443711 GPX1P07203 203 aa11.53□□□□□ -0.56
USP40-206ENST00000443711 TAS2R60P59551 318 aa11.53□□□□□ -0.56
USP40-206ENST00000443711 Q86TA4 180 aa11.53□□□□□ -0.56
USP40-206ENST00000443711 IGF2BP2-AS1Q96M15 143 aa11.53□□□□□ -0.56
USP40-206ENST00000443711 TRAV12-2A0A075B6T6 113 aa11.52□□□□□ -0.57
USP40-206ENST00000443711 KLLNB2CW77 178 aa11.52□□□□□ -0.57
USP40-206ENST00000443711 J3KRW8 73 aa11.52□□□□□ -0.57
USP40-206ENST00000443711 CRXO43186 299 aaPredicted RBP11.52□□□□□ -0.57
USP40-206ENST00000443711 INSP01308 110 aa11.52□□□□□ -0.57
USP40-206ENST00000443711 SRP19P09132 144 aaKnown RBP11.52□□□□□ -0.57
USP40-206ENST00000443711 RPL35P42766 123 aaKnown RBP11.52□□□□□ -0.57
USP40-206ENST00000443711 ZFAND2AQ8N6M9 145 aa11.52□□□□□ -0.57
USP40-206ENST00000443711 TVP23CQ96ET8 276 aa11.52□□□□□ -0.57
USP40-206ENST00000443711 ASCL2Q99929 193 aa11.52□□□□□ -0.57
USP40-206ENST00000443711 RNASE4P34096 147 aaKnown RBP11.51□□□□□ -0.57
USP40-206ENST00000443711 DEFB135Q30KP9 77 aa11.51□□□□□ -0.57
USP40-206ENST00000443711 BAGE2Q86Y30 109 aa11.51□□□□□ -0.57
USP40-206ENST00000443711 CSNK1G2-AS1Q8NCQ2 148 aa11.51□□□□□ -0.57
USP40-206ENST00000443711 RCHY1Q96PM5 261 aa11.51□□□□□ -0.57
USP40-206ENST00000443711 C20orf144Q9BQM9 153 aa11.51□□□□□ -0.57
USP40-206ENST00000443711 DERL1Q9BUN8 251 aa11.51□□□□□ -0.57
USP40-206ENST00000443711 C7orf71A4D174 169 aa11.5□□□□□ -0.57
USP40-206ENST00000443711 LTAP01374 205 aa11.5□□□□□ -0.57
USP40-206ENST00000443711 CEBPGP53567 150 aa11.5□□□□□ -0.57
USP40-206ENST00000443711 SRSF3P84103 164 aaKnown RBP11.5□□□□□ -0.57
USP40-206ENST00000443711 KIR3DS1Q14943 382 aa11.5□□□□□ -0.57
USP40-206ENST00000443711 SMUG1Q53HV7 270 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 223 ms