RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 SMIM12Q96EX1 92 aa5.37□□□□□ -1.55
R3HDM1-210ENST00000443537 SPAG8Q99932 426 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-210ENST00000443537 FAM110AQ9BQ89 295 aa5.37□□□□□ -1.55
R3HDM1-210ENST00000443537 ZMAT5Q9UDW3 170 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-210ENST00000443537 NIPBLQ6KC79 2804 aaeCLIP5.37□□□□□ -1.55
R3HDM1-210ENST00000443537 SORL1Q92673 2214 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 TRAV5A0A0B4J249 113 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 CBY3A6NI87 242 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 PAGE4O60829 102 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 SLC25A5P05141 298 aaKnown RBP5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 CSN3P07498 182 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 OR10J4P0C629 311 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 PYYP10082 97 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 LEMD1Q68G75 181 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 LCN12Q6JVE5 192 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 RBPMS2Q6ZRY4 209 aaKnown RBP5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 TCF24Q7RTU0 167 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 C11orf52Q96A22 123 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 ATG101Q9BSB4 218 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 SLC35B3Q9H1N7 401 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 Q9H3A6 140 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 ZNF331Q9NQX6 463 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 ZNF586Q9NXT0 402 aa5.36□□□□□ -1.55
R3HDM1-210ENST00000443537 IGHV3OR16-8A0A075B7F1 116 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 RBAKDNA6NC62 111 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 OR4C46A6NHA9 309 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 H3BQ15 152 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 ZNF207O43670 478 aaKnown RBP5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 S100A1P23297 94 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 RANP62826 216 aaKnown RBP5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 CCL20P78556 96 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 PNRC1Q12796 327 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 HAGHQ16775 308 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 KRTAP21-3Q3LHN1 58 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 C9orf66Q5T8R8 295 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 C18orf65Q6ZTR6 163 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 CYB561D1Q8N8Q1 229 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 BLNKQ8WV28 456 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 TREM1Q9NP99 234 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 BIN3Q9NQY0 253 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 LY96Q9Y6Y9 160 aa5.35□□□□□ -1.55
R3HDM1-210ENST00000443537 TRBV7-9A0A0J9YWB2 115 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 TRBV6-1A0A0K0K1D8 114 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 A0A1B0GV50 99 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 GGTLC3B5MD39 225 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 C9JCJ5 164 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 DNASE2O00115 360 aaPredicted RBP5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 NDUFB4O95168 129 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 IGLV1-51P01701 117 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 APOHP02749 345 aaPredicted RBP5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 CNN1P51911 297 aaKnown RBP5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 TAS2R60P59551 318 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 CD81P60033 236 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 KRTAP10-3P60369 221 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 UBE2G2P60604 165 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 DEFB114Q30KQ6 69 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 SOHLH1Q5JUK2 328 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 WFDC9Q8NEX5 89 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 DCANP1Q8TF63 244 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 PCNPQ8WW12 178 aaKnown RBP5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 FMC1Q96HJ9 113 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 SEC11CQ9BY50 192 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 EPDR1Q9UM22 224 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 YTHDF2Q9Y5A9 579 aaKnown RBP5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 LENEPQ9Y5L5 61 aa5.34□□□□□ -1.55
R3HDM1-210ENST00000443537 TMEM218A2RU14 115 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 PGPA6NDG6 321 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 PGPEP1LA6NFU8 196 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 K7EQG2 157 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 PEX7O00628 323 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 SOCS3O14543 225 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 SAP30O75446 220 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 TCRAP04437 139 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 SFTA3P0C7M3 94 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 AKR1C3P42330 323 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 PSG3Q16557 428 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 TMEM183BQ1AE95 376 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 ODF3L2Q3SX64 289 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 TMEM75Q8N9X5 138 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 DUX3Q96PT4 197 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 RARRES2Q99969 163 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 NIPSNAP3BQ9BS92 247 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 MS4A6AQ9H2W1 248 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 ZFP30Q9Y2G7 519 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 KLF12Q9Y4X4 402 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 SMAD5-AS1Q9Y6J3 95 aa5.33□□□□□ -1.56
R3HDM1-210ENST00000443537 CUBNO60494 3623 aa5.32□□□□□ -1.56
R3HDM1-210ENST00000443537 IGHV3OR16-13A0A075B7E8 117 aa5.32□□□□□ -1.56
R3HDM1-210ENST00000443537 IGHV3-49A0A0A0MS15 119 aa5.32□□□□□ -1.56
R3HDM1-210ENST00000443537 IGHV3-74A0A0B4J1X5 117 aa5.32□□□□□ -1.56
R3HDM1-210ENST00000443537 IGHV3-66A0A0C4DH42 116 aa5.32□□□□□ -1.56
R3HDM1-210ENST00000443537 ZNF727A8MUV8 499 aa5.32□□□□□ -1.56
R3HDM1-210ENST00000443537 B4DEV8 164 aa5.32□□□□□ -1.56
R3HDM1-210ENST00000443537 USP17L23D6RBM5 183 aa5.32□□□□□ -1.56
R3HDM1-210ENST00000443537 SRP19P09132 144 aaKnown RBP5.32□□□□□ -1.56
R3HDM1-210ENST00000443537 ATP5G3P48201 142 aa5.32□□□□□ -1.56
R3HDM1-210ENST00000443537 UBE2G1P62253 170 aa5.32□□□□□ -1.56
R3HDM1-210ENST00000443537 SAPCD1Q5SSQ6 148 aa5.32□□□□□ -1.56
R3HDM1-210ENST00000443537 TMEM61Q8N0U2 210 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms