RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 PEMTQ9UBM1 199 aa14.38□□□□□ -0.11
SNX17-203ENST00000440760 TGIF2-C20orf24A0A0A6YYL0 155 aa14.38□□□□□ -0.11
SNX17-203ENST00000440760 SERTM2A0A1B0GWG4 89 aa14.38□□□□□ -0.11
SNX17-203ENST00000440760 M0QZ24 198 aa14.38□□□□□ -0.11
SNX17-203ENST00000440760 S100A8P05109 93 aa14.38□□□□□ -0.11
SNX17-203ENST00000440760 IBA57Q5T440 356 aaKnown RBP14.38□□□□□ -0.11
SNX17-203ENST00000440760 GPR61Q9BZJ8 451 aa14.38□□□□□ -0.11
SNX17-203ENST00000440760 TRBV6-1A0A0K0K1D8 114 aa14.37□□□□□ -0.11
SNX17-203ENST00000440760 CSN3P07498 182 aa14.37□□□□□ -0.11
SNX17-203ENST00000440760 CXCL1P09341 107 aa14.37□□□□□ -0.11
SNX17-203ENST00000440760 TMEM183AQ8IXX5 376 aa14.37□□□□□ -0.11
SNX17-203ENST00000440760 ZC2HC1AQ96GY0 325 aa14.37□□□□□ -0.11
SNX17-203ENST00000440760 V9GYV3 84 aa14.37□□□□□ -0.11
SNX17-203ENST00000440760 CXorf65A6NEN9 183 aa14.36□□□□□ -0.11
SNX17-203ENST00000440760 C1orf196B1AJZ1 125 aa14.36□□□□□ -0.11
SNX17-203ENST00000440760 ARL6IP6Q8N6S5 226 aa14.36□□□□□ -0.11
SNX17-203ENST00000440760 MRPL53Q96EL3 112 aaKnown RBP14.36□□□□□ -0.11
SNX17-203ENST00000440760 CA1P00915 261 aaPredicted RBP14.36□□□□□ -0.11
SNX17-203ENST00000440760 SMIM12Q96EX1 92 aa14.36□□□□□ -0.11
SNX17-203ENST00000440760 ATRQ13535 2644 aa14.35□□□□□ -0.11
SNX17-203ENST00000440760 F6UB75 175 aa14.35□□□□□ -0.11
SNX17-203ENST00000440760 PPP1R2P9O14990 202 aa14.35□□□□□ -0.11
SNX17-203ENST00000440760 SMIM6P0DI80 62 aa14.35□□□□□ -0.11
SNX17-203ENST00000440760 OSTCQ9NRP0 149 aa14.35□□□□□ -0.11
SNX17-203ENST00000440760 C5orf52A6NGY3 159 aa14.34□□□□□ -0.11
SNX17-203ENST00000440760 FAM3BP58499 235 aaPredicted RBP14.34□□□□□ -0.11
SNX17-203ENST00000440760 NUDT10Q8NFP7 164 aa14.34□□□□□ -0.11
SNX17-203ENST00000440760 NUDT11Q96G61 164 aa14.34□□□□□ -0.11
SNX17-203ENST00000440760 UBE2CO00762 179 aa14.34□□□□□ -0.11
SNX17-203ENST00000440760 PFN1P07737 140 aaKnown RBP14.34□□□□□ -0.11
SNX17-203ENST00000440760 ZNF688P0C7X2 276 aa14.34□□□□□ -0.11
SNX17-203ENST00000440760 DYNLRB2Q8TF09 96 aa14.34□□□□□ -0.11
SNX17-203ENST00000440760 AGPAT4-IT1Q9H0P7 198 aa14.34□□□□□ -0.11
SNX17-203ENST00000440760 ZFP30Q9Y2G7 519 aa14.34□□□□□ -0.11
SNX17-203ENST00000440760 A0A1W2PPQ1 181 aa14.33□□□□□ -0.12
SNX17-203ENST00000440760 ZNF705GA8MUZ8 300 aaPredicted RBP14.33□□□□□ -0.12
SNX17-203ENST00000440760 OVOL1O14753 267 aa14.33□□□□□ -0.12
SNX17-203ENST00000440760 TMEM61Q8N0U2 210 aa14.33□□□□□ -0.12
SNX17-203ENST00000440760 ZFP82Q8N141 532 aa14.33□□□□□ -0.12
SNX17-203ENST00000440760 PRR25Q96S07 402 aa14.33□□□□□ -0.12
SNX17-203ENST00000440760 SORL1Q92673 2214 aa14.33□□□□□ -0.12
SNX17-203ENST00000440760 RBAKDNA6NC62 111 aa14.33□□□□□ -0.12
SNX17-203ENST00000440760 K7EQG2 157 aa14.33□□□□□ -0.12
SNX17-203ENST00000440760 SNRPEP62304 92 aaKnown RBP14.33□□□□□ -0.12
SNX17-203ENST00000440760 NDUFA11Q86Y39 141 aa14.33□□□□□ -0.12
SNX17-203ENST00000440760 CLEC5AQ9NY25 188 aa14.33□□□□□ -0.12
SNX17-203ENST00000440760 A0A1B0GUS0 222 aa14.32□□□□□ -0.12
SNX17-203ENST00000440760 TCL1AP56279 114 aa14.32□□□□□ -0.12
SNX17-203ENST00000440760 FAM231DQ6ZW35 169 aa14.32□□□□□ -0.12
SNX17-203ENST00000440760 C19orf71A6NCJ1 209 aa14.31□□□□□ -0.12
SNX17-203ENST00000440760 S100PP25815 95 aa14.31□□□□□ -0.12
SNX17-203ENST00000440760 CRIP1P50238 77 aa14.31□□□□□ -0.12
SNX17-203ENST00000440760 FOXL1Q12952 345 aa14.31□□□□□ -0.12
SNX17-203ENST00000440760 PSMG4Q5JS54 123 aa14.31□□□□□ -0.12
SNX17-203ENST00000440760 IL36BQ9NZH7 164 aa14.31□□□□□ -0.12
SNX17-203ENST00000440760 GATCO43716 136 aaKnown RBP14.31□□□□□ -0.12
SNX17-203ENST00000440760 S100A6P06703 90 aa14.31□□□□□ -0.12
SNX17-203ENST00000440760 RAB5AP20339 215 aa14.31□□□□□ -0.12
SNX17-203ENST00000440760 ID1P41134 155 aa14.31□□□□□ -0.12
SNX17-203ENST00000440760 HIST1H1AQ02539 215 aaPredicted RBP14.31□□□□□ -0.12
SNX17-203ENST00000440760 TMEM78Q5T7P6 136 aa14.31□□□□□ -0.12
SNX17-203ENST00000440760 ZNF492Q9P255 531 aa14.31□□□□□ -0.12
SNX17-203ENST00000440760 CD300EQ496F6 205 aaPredicted RBP14.3□□□□□ -0.12
SNX17-203ENST00000440760 C9orf47Q6ZRZ4 202 aa14.3□□□□□ -0.12
SNX17-203ENST00000440760 LURAP1LQ8IV03 231 aa14.3□□□□□ -0.12
SNX17-203ENST00000440760 ZNF80P51504 273 aaPredicted RBP14.29□□□□□ -0.12
SNX17-203ENST00000440760 ZNF138P52744 262 aa14.29□□□□□ -0.12
SNX17-203ENST00000440760 RPL19P84098 196 aaKnown RBP14.29□□□□□ -0.12
SNX17-203ENST00000440760 DEFB114Q30KQ6 69 aa14.29□□□□□ -0.12
SNX17-203ENST00000440760 GDF5OSQ5U4N7 250 aa14.29□□□□□ -0.12
SNX17-203ENST00000440760 KCNIP4Q6PIL6 250 aa14.29□□□□□ -0.12
SNX17-203ENST00000440760 RBPMS2Q6ZRY4 209 aaKnown RBP14.29□□□□□ -0.12
SNX17-203ENST00000440760 OR8A1Q8NGG7 326 aa14.29□□□□□ -0.12
SNX17-203ENST00000440760 IZUMO1RA6ND01 250 aa14.29□□□□□ -0.12
SNX17-203ENST00000440760 FBLL1A6NHQ2 334 aaKnown RBP14.29□□□□□ -0.12
SNX17-203ENST00000440760 P01737 135 aa14.29□□□□□ -0.12
SNX17-203ENST00000440760 SAPCD1Q5SSQ6 148 aa14.29□□□□□ -0.12
SNX17-203ENST00000440760 OR10J6PQ8NGY7 276 aa14.29□□□□□ -0.12
SNX17-203ENST00000440760 FAM210BQ96KR6 192 aa14.29□□□□□ -0.12
SNX17-203ENST00000440760 NDFIP1Q9BT67 221 aa14.29□□□□□ -0.12
SNX17-203ENST00000440760 CT45A10P0DMU9 189 aa14.28□□□□□ -0.12
SNX17-203ENST00000440760 CD33P20138 364 aa14.28□□□□□ -0.12
SNX17-203ENST00000440760 SAMD13Q5VXD3 122 aa14.28□□□□□ -0.12
SNX17-203ENST00000440760 DAZAP1Q96EP5 407 aaKnown RBP14.28□□□□□ -0.12
SNX17-203ENST00000440760 RPP21Q9H633 154 aaKnown RBP14.28□□□□□ -0.12
SNX17-203ENST00000440760 AGRNO00468 2067 aa14.28□□□□□ -0.12
SNX17-203ENST00000440760 TRBV24-1A0A075B6N3 115 aa14.27□□□□□ -0.12
SNX17-203ENST00000440760 NPIPB6E9PJ23 425 aa14.27□□□□□ -0.12
SNX17-203ENST00000440760 SNRPD3P62318 126 aaKnown RBP14.27□□□□□ -0.12
SNX17-203ENST00000440760 PAFAH1B2P68402 229 aa14.27□□□□□ -0.12
SNX17-203ENST00000440760 ZMAT5Q9UDW3 170 aaKnown RBP14.27□□□□□ -0.12
SNX17-203ENST00000440760 J3KRW8 73 aa14.27□□□□□ -0.13
SNX17-203ENST00000440760 SH2D1AO60880 128 aa14.27□□□□□ -0.13
SNX17-203ENST00000440760 PF4P02776 101 aa14.27□□□□□ -0.13
SNX17-203ENST00000440760 IMMP2LQ96T52 175 aa14.27□□□□□ -0.13
SNX17-203ENST00000440760 VWFP04275 2813 aa14.27□□□□□ -0.13
SNX17-203ENST00000440760 SAP30O75446 220 aa14.26□□□□□ -0.13
SNX17-203ENST00000440760 GZMBP10144 247 aa14.26□□□□□ -0.13
SNX17-203ENST00000440760 RPS10P46783 165 aaKnown RBP14.26□□□□□ -0.13
SNX17-203ENST00000440760 KRTAP24-1Q3LI83 254 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms