RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 GNPNAT1Q96EK6 184 aaPredicted RBP11.8□□□□□ -0.52
TOM1-207ENST00000439512 ODF3Q96PU9 254 aa11.8□□□□□ -0.52
TOM1-207ENST00000439512 VGLL1Q99990 258 aa11.8□□□□□ -0.52
TOM1-207ENST00000439512 PGPA6NDG6 321 aa11.79□□□□□ -0.52
TOM1-207ENST00000439512 IGLL5B9A064 214 aa11.79□□□□□ -0.52
TOM1-207ENST00000439512 TAAR5O14804 337 aa11.79□□□□□ -0.52
TOM1-207ENST00000439512 TAS2R60P59551 318 aa11.79□□□□□ -0.52
TOM1-207ENST00000439512 C9orf47Q6ZRZ4 202 aa11.79□□□□□ -0.52
TOM1-207ENST00000439512 HYLS1Q96M11 299 aa11.79□□□□□ -0.52
TOM1-207ENST00000439512 DEFB131BA0A096LNP1 70 aa11.78□□□□□ -0.52
TOM1-207ENST00000439512 TRAV12-3A0A0B4J271 114 aa11.78□□□□□ -0.52
TOM1-207ENST00000439512 H7BYZ3 331 aa11.78□□□□□ -0.52
TOM1-207ENST00000439512 TMEM78Q5T7P6 136 aa11.78□□□□□ -0.52
TOM1-207ENST00000439512 C20orf144Q9BQM9 153 aa11.78□□□□□ -0.52
TOM1-207ENST00000439512 NIPSNAP3BQ9BS92 247 aa11.78□□□□□ -0.52
TOM1-207ENST00000439512 ACTR3CQ9C0K3 210 aaPredicted RBP11.78□□□□□ -0.52
TOM1-207ENST00000439512 LY6G6CO95867 125 aa11.77□□□□□ -0.53
TOM1-207ENST00000439512 SLC25A5P05141 298 aaKnown RBP11.77□□□□□ -0.53
TOM1-207ENST00000439512 STAG3L2P0CL84 134 aa11.77□□□□□ -0.53
TOM1-207ENST00000439512 STAG3L3P0CL85 134 aa11.77□□□□□ -0.53
TOM1-207ENST00000439512 ARL14EPLP0DKL9 152 aa11.77□□□□□ -0.53
TOM1-207ENST00000439512 RNASE4P34096 147 aaKnown RBP11.77□□□□□ -0.53
TOM1-207ENST00000439512 OR11H4Q8NGC9 324 aa11.77□□□□□ -0.53
TOM1-207ENST00000439512 RXFP4Q8TDU9 374 aa11.77□□□□□ -0.53
TOM1-207ENST00000439512 OTORQ9NRC9 128 aa11.77□□□□□ -0.53
TOM1-207ENST00000439512 CYTL1Q9NRR1 136 aa11.77□□□□□ -0.53
TOM1-207ENST00000439512 TEX48A0A1B0GUV7 120 aa11.76□□□□□ -0.53
TOM1-207ENST00000439512 GPX1P07203 203 aa11.76□□□□□ -0.53
TOM1-207ENST00000439512 ZNF138P52744 262 aa11.76□□□□□ -0.53
TOM1-207ENST00000439512 CD300CQ08708 224 aa11.76□□□□□ -0.53
TOM1-207ENST00000439512 FAM74A1Q5RGS3 127 aa11.76□□□□□ -0.53
TOM1-207ENST00000439512 CMTM2Q8TAZ6 248 aa11.76□□□□□ -0.53
TOM1-207ENST00000439512 LINC00476Q8WZB0 136 aa11.76□□□□□ -0.53
TOM1-207ENST00000439512 FAM19A4Q96LR4 140 aa11.76□□□□□ -0.53
TOM1-207ENST00000439512 ZNF492Q9P255 531 aa11.76□□□□□ -0.53
TOM1-207ENST00000439512 C7orf71A4D174 169 aa11.75□□□□□ -0.53
TOM1-207ENST00000439512 KLLNB2CW77 178 aa11.75□□□□□ -0.53
TOM1-207ENST00000439512 DIRC3C9JPN6 131 aa11.75□□□□□ -0.53
TOM1-207ENST00000439512 GCHFRP30047 84 aa11.75□□□□□ -0.53
TOM1-207ENST00000439512 DAD1P61803 113 aa11.75□□□□□ -0.53
TOM1-207ENST00000439512 ZNF493Q6ZR52 646 aa11.75□□□□□ -0.53
TOM1-207ENST00000439512 CCDC28AQ8IWP9 274 aa11.75□□□□□ -0.53
TOM1-207ENST00000439512 KCNRGQ8N5I3 272 aa11.75□□□□□ -0.53
TOM1-207ENST00000439512 C16orf74Q96GX8 76 aa11.75□□□□□ -0.53
TOM1-207ENST00000439512 RPH3ALQ9UNE2 315 aa11.75□□□□□ -0.53
TOM1-207ENST00000439512 PLAC8L1A1L4L8 177 aa11.74□□□□□ -0.53
TOM1-207ENST00000439512 LYRM9A8MSI8 78 aa11.74□□□□□ -0.53
TOM1-207ENST00000439512 HMSDA8MTL9 139 aa11.74□□□□□ -0.53
TOM1-207ENST00000439512 CXorf1O96002 111 aa11.74□□□□□ -0.53
TOM1-207ENST00000439512 DEFB130BP0DP73 79 aa11.74□□□□□ -0.53
TOM1-207ENST00000439512 DEFB130AP0DP74 79 aa11.74□□□□□ -0.53
TOM1-207ENST00000439512 HTN3P15516 51 aa11.74□□□□□ -0.53
TOM1-207ENST00000439512 CRISP2P16562 243 aa11.74□□□□□ -0.53
TOM1-207ENST00000439512 BTN1A1Q13410 526 aa11.74□□□□□ -0.53
TOM1-207ENST00000439512 SSX7Q7RTT5 188 aa11.74□□□□□ -0.53
TOM1-207ENST00000439512 Q8TAT8 98 aa11.74□□□□□ -0.53
TOM1-207ENST00000439512 ARPC5LQ9BPX5 153 aa11.74□□□□□ -0.53
TOM1-207ENST00000439512 APLNQ9ULZ1 77 aa11.74□□□□□ -0.53
TOM1-207ENST00000439512 IGHV4-4A0A075B6R2 117 aa11.73□□□□□ -0.53
TOM1-207ENST00000439512 A0A0D9SG52 128 aa11.73□□□□□ -0.53
TOM1-207ENST00000439512 RBAKDNA6NC62 111 aa11.73□□□□□ -0.53
TOM1-207ENST00000439512 NMBP08949 121 aa11.73□□□□□ -0.53
TOM1-207ENST00000439512 TCTAP57738 103 aa11.73□□□□□ -0.53
TOM1-207ENST00000439512 ZNF345Q14585 488 aa11.73□□□□□ -0.53
TOM1-207ENST00000439512 AKR1C8PQ5T2L2 129 aa11.73□□□□□ -0.53
TOM1-207ENST00000439512 IQCF2Q8IXL9 164 aa11.73□□□□□ -0.53
TOM1-207ENST00000439512 ZFAND2AQ8N6M9 145 aa11.73□□□□□ -0.53
TOM1-207ENST00000439512 PYGO2Q9BRQ0 406 aa11.73□□□□□ -0.53
TOM1-207ENST00000439512 TIMM8BQ9Y5J9 83 aaPredicted RBP11.73□□□□□ -0.53
TOM1-207ENST00000439512 KMT2AQ03164 3969 aa11.72□□□□□ -0.53
TOM1-207ENST00000439512 ZNF324O75467 553 aaPredicted RBP11.72□□□□□ -0.53
TOM1-207ENST00000439512 ZNF726P1Q15940 193 aa11.72□□□□□ -0.53
TOM1-207ENST00000439512 Q6ZNX1 250 aa11.72□□□□□ -0.53
TOM1-207ENST00000439512 SUN5Q8TC36 379 aa11.72□□□□□ -0.53
TOM1-207ENST00000439512 RNASE8Q8TDE3 154 aaKnown RBP11.72□□□□□ -0.53
TOM1-207ENST00000439512 TMEM263Q8WUH6 116 aaKnown RBP11.72□□□□□ -0.53
TOM1-207ENST00000439512 NOP10Q9NPE3 64 aaKnown RBP11.72□□□□□ -0.53
TOM1-207ENST00000439512 TMEM167BQ9NRX6 74 aa11.72□□□□□ -0.53
TOM1-207ENST00000439512 VPS13DQ5THJ4 4388 aa11.71□□□□□ -0.53
TOM1-207ENST00000439512 CTXND1A0A1B0GTU2 59 aa11.71□□□□□ -0.53
TOM1-207ENST00000439512 PRR9Q5T870 116 aa11.71□□□□□ -0.53
TOM1-207ENST00000439512 GOLT1AQ6ZVE7 132 aa11.71□□□□□ -0.53
TOM1-207ENST00000439512 ARL6IP6Q8N6S5 226 aa11.71□□□□□ -0.53
TOM1-207ENST00000439512 ST6GAL2Q96JF0 529 aa11.71□□□□□ -0.53
TOM1-207ENST00000439512 TRBV7-9A0A0J9YWB2 115 aa11.7□□□□□ -0.54
TOM1-207ENST00000439512 KANTRA0A1W2PQU2 76 aa11.7□□□□□ -0.54
TOM1-207ENST00000439512 SUMO1P63165 101 aaKnown RBP11.7□□□□□ -0.54
TOM1-207ENST00000439512 GNG5P63218 68 aa11.7□□□□□ -0.54
TOM1-207ENST00000439512 LGALS9CQ6DKI2 356 aa11.7□□□□□ -0.54
TOM1-207ENST00000439512 Q6ZQT7 251 aa11.7□□□□□ -0.54
TOM1-207ENST00000439512 ZNF471Q9BX82 626 aaPredicted RBP11.7□□□□□ -0.54
TOM1-207ENST00000439512 TMPRSS5Q9H3S3 457 aa11.7□□□□□ -0.54
TOM1-207ENST00000439512 CBY3A6NI87 242 aa11.69□□□□□ -0.54
TOM1-207ENST00000439512 SNURFLB1AK76 121 aa11.69□□□□□ -0.54
TOM1-207ENST00000439512 RGS13O14921 159 aa11.69□□□□□ -0.54
TOM1-207ENST00000439512 FGF8P55075 233 aaPredicted RBP11.69□□□□□ -0.54
TOM1-207ENST00000439512 NDUFAF3Q9BU61 184 aa11.69□□□□□ -0.54
TOM1-207ENST00000439512 LENEPQ9Y5L5 61 aa11.69□□□□□ -0.54
TOM1-207ENST00000439512 TRAV8-1A0A0A6YYK1 113 aa11.68□□□□□ -0.54
TOM1-207ENST00000439512 BCL2L11O43521 198 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms