RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 DYNLRB2Q8TF09 96 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 RITA1Q96K30 269 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 JMJD8Q96S16 334 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 CHAC1Q9BUX1 264 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 TP53TG3Q9ULZ0 132 aa5.3□□□□□ -1.56
CSDE1-205ENST00000438362 ZNF256Q9Y2P7 627 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-205ENST00000438362 HOXA3O43365 443 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-205ENST00000438362 NPYP01303 97 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 CD7P09564 240 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 NPFFR1Q9GZQ6 430 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 C9orf118A6NHY6 69 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 SFTA2Q6UW10 78 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 TMEM219Q86XT9 240 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 DEFB125Q8N687 156 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 LINC00477Q96M19 166 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 LINC00574Q9H8X3 128 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 MOB4Q9Y3A3 225 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 TNRC6AQ8NDV7 1962 aaKnown RBP5.29□□□□□ -1.56
CSDE1-205ENST00000438362 H7C1H1 209 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 I3L2K1 104 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 IGLV2-23P01705 113 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 EFNA4P52798 201 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 RNF182Q8N6D2 247 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 Q8N7P7 452 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 PRSS33Q8NF86 280 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 DPH3P1Q9H4G8 78 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 C7orf69Q9H7B7 122 aa5.29□□□□□ -1.56
CSDE1-205ENST00000438362 IGKV1D-37A0A075B6S9 117 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 TRAV40A0A0B4J280 105 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 IGHV2-70DA0A0C4DH43 119 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 A0A1B0GV72 72 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 CD300EQ496F6 205 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-205ENST00000438362 GAGE13Q4V321 117 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 FAM110DQ8TAY7 271 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-205ENST00000438362 DYSFO75923 2080 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 TMEM8BA6NDV4 472 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 LINC01549A6NIU2 74 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 SHISA9B4DS77 424 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 K7EIM0 57 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 CRYGCP07315 174 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 VGLL1Q99990 258 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 EXPH5Q8NEV8 1989 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 KIAA1549Q9HCM3 1950 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 ATP6V0E1O15342 81 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 SAA4P35542 130 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 LINC01545Q5VT33 79 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 SP5Q6BEB4 398 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-205ENST00000438362 IL17RELQ6ZVW7 336 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 C14orf178Q8N769 122 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-205ENST00000438362 Q8N8P6 123 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 SIGMAR1Q99720 223 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 NAV3Q8IVL0 2385 aa5.28□□□□□ -1.56
CSDE1-205ENST00000438362 C2orf70A6NJV1 201 aa5.27□□□□□ -1.57
CSDE1-205ENST00000438362 NPFFO15130 113 aa5.27□□□□□ -1.57
CSDE1-205ENST00000438362 MBD6Q96DN6 1003 aa5.27□□□□□ -1.57
CSDE1-205ENST00000438362 GEMIN7Q9H840 131 aaKnown RBP5.27□□□□□ -1.57
CSDE1-205ENST00000438362 BEX4Q9NWD9 120 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-205ENST00000438362 A0A1B0GXF2 115 aa5.27□□□□□ -1.57
CSDE1-205ENST00000438362 C19orf71A6NCJ1 209 aa5.27□□□□□ -1.57
CSDE1-205ENST00000438362 NDUFS7O75251 213 aa5.27□□□□□ -1.57
CSDE1-205ENST00000438362 EGR2P11161 476 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-205ENST00000438362 CCL19Q99731 98 aa5.27□□□□□ -1.57
CSDE1-205ENST00000438362 IGLV1-47P01700 117 aa5.27□□□□□ -1.57
CSDE1-205ENST00000438362 PAX2Q02962 417 aa5.27□□□□□ -1.57
CSDE1-205ENST00000438362 GDF5OSQ5U4N7 250 aa5.27□□□□□ -1.57
CSDE1-205ENST00000438362 TNFRSF18Q9Y5U5 241 aa5.27□□□□□ -1.57
CSDE1-205ENST00000438362 TEX22C9J3V5 150 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 K7EP13 123 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 SRD5A1P18405 259 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 PRSS22Q9GZN4 317 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 DKK2Q9UBU2 259 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 G3V318 75 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 SIVA1O15304 175 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 TGFAP01135 160 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 HLA-DMBP28068 263 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 UBE2E1P51965 193 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 SMAGPQ0VAQ4 97 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 DTX2Q86UW9 622 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 MRAP2Q96G30 205 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 DUX5Q96PT3 197 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 VCX2Q9H322 139 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 SCRT2Q9NQ03 307 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 K7EP34 96 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 CIRBPQ14011 172 aaKnown RBP5.26□□□□□ -1.57
CSDE1-205ENST00000438362 ANKRD39Q53RE8 183 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 LINC00322Q6ZN03 302 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-205ENST00000438362 MTURNQ8N3F0 131 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 RAX2Q96IS3 184 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 MLST8Q9BVC4 326 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 CSTL1Q9H114 145 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 IGF2-ASQ6U949 168 aa5.26□□□□□ -1.57
CSDE1-205ENST00000438362 RNASE8Q8TDE3 154 aaKnown RBP5.26□□□□□ -1.57
CSDE1-205ENST00000438362 MRPL35Q9NZE8 188 aaKnown RBP5.26□□□□□ -1.57
CSDE1-205ENST00000438362 FAM223BA6NKX1 122 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 K7ENP7 123 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 CTRLP40313 264 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 SUMO2P61956 95 aaKnown RBP5.25□□□□□ -1.57
CSDE1-205ENST00000438362 BRD3OSQ6XYD6 125 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 ADAMTSL5Q6ZMM2 481 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 C8orf86Q6ZUL3 223 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms