RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 NUP35Q8NFH5 326 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 C4orf3Q8WVX3 66 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 M0QZ24 198 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 SOCS3O14543 225 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 TCL1AP56279 114 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 COA6Q5JTJ3 125 aaKnown RBP11.7□□□□□ -0.54
SGCE-205ENST00000437425 LINC00322Q6ZN03 302 aaPredicted RBP11.7□□□□□ -0.54
SGCE-205ENST00000437425 OR2D3Q8NGH3 330 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 C16orf95Q9H693 158 aa11.7□□□□□ -0.54
SGCE-205ENST00000437425 CCDC168Q8NDH2 2452 aa11.69□□□□□ -0.54
SGCE-205ENST00000437425 ZNF705FA8MVS1 300 aaPredicted RBP11.69□□□□□ -0.54
SGCE-205ENST00000437425 SNURFLB1AK76 121 aa11.69□□□□□ -0.54
SGCE-205ENST00000437425 CA1P00915 261 aaPredicted RBP11.69□□□□□ -0.54
SGCE-205ENST00000437425 S100A8P05109 93 aa11.69□□□□□ -0.54
SGCE-205ENST00000437425 ZNF138P52744 262 aa11.69□□□□□ -0.54
SGCE-205ENST00000437425 RPL11P62913 178 aaKnown RBP11.69□□□□□ -0.54
SGCE-205ENST00000437425 LINC00477Q96M19 166 aa11.69□□□□□ -0.54
SGCE-205ENST00000437425 ASCL2Q99929 193 aa11.69□□□□□ -0.54
SGCE-205ENST00000437425 VGLL1Q99990 258 aa11.69□□□□□ -0.54
SGCE-205ENST00000437425 MRPL18Q9H0U6 180 aaKnown RBP11.69□□□□□ -0.54
SGCE-205ENST00000437425 TRBV7-9A0A0J9YWB2 115 aa11.68□□□□□ -0.54
SGCE-205ENST00000437425 A0A1B0GW15 77 aa11.68□□□□□ -0.54
SGCE-205ENST00000437425 TMEM213A2RRL7 107 aa11.68□□□□□ -0.54
SGCE-205ENST00000437425 HLA-DMBP28068 263 aa11.68□□□□□ -0.54
SGCE-205ENST00000437425 HOXD3P31249 432 aaPredicted RBP11.68□□□□□ -0.54
SGCE-205ENST00000437425 HILS1P60008 231 aa11.68□□□□□ -0.54
SGCE-205ENST00000437425 IGFL4Q6B9Z1 124 aa11.68□□□□□ -0.54
SGCE-205ENST00000437425 TCF24Q7RTU0 167 aa11.68□□□□□ -0.54
SGCE-205ENST00000437425 RNF182Q8N6D2 247 aa11.68□□□□□ -0.54
SGCE-205ENST00000437425 ZNF738Q8NE65 137 aa11.68□□□□□ -0.54
SGCE-205ENST00000437425 OR10J6PQ8NGY7 276 aa11.68□□□□□ -0.54
SGCE-205ENST00000437425 ZFHX3Q15911 3703 aa11.68□□□□□ -0.54
SGCE-205ENST00000437425 IGHV4OR15-8A0A075B7B6 117 aa11.67□□□□□ -0.54
SGCE-205ENST00000437425 A0A087WW49 117 aa11.67□□□□□ -0.54
SGCE-205ENST00000437425 FABP5P3A8MUU1 101 aa11.67□□□□□ -0.54
SGCE-205ENST00000437425 LINC01619G3V211 115 aa11.67□□□□□ -0.54
SGCE-205ENST00000437425 FOSL1P15407 271 aa11.67□□□□□ -0.54
SGCE-205ENST00000437425 KLF5Q13887 457 aaPredicted RBP11.67□□□□□ -0.54
SGCE-205ENST00000437425 TMEM136Q6ZRR5 245 aa11.67□□□□□ -0.54
SGCE-205ENST00000437425 DPF1Q92782 380 aa11.67□□□□□ -0.54
SGCE-205ENST00000437425 ESM1Q9NQ30 184 aa11.67□□□□□ -0.54
SGCE-205ENST00000437425 PEMTQ9UBM1 199 aa11.67□□□□□ -0.54
SGCE-205ENST00000437425 FLNAP21333 2647 aaKnown RBP11.67□□□□□ -0.54
SGCE-205ENST00000437425 MXRA5Q9NR99 2828 aa11.66□□□□□ -0.54
SGCE-205ENST00000437425 TMEM189A5PLL7 270 aa11.66□□□□□ -0.54
SGCE-205ENST00000437425 CBLN1P23435 193 aa11.66□□□□□ -0.54
SGCE-205ENST00000437425 HBBP68871 147 aa11.66□□□□□ -0.54
SGCE-205ENST00000437425 BORCS7Q96B45 105 aa11.66□□□□□ -0.54
SGCE-205ENST00000437425 C8orf49Q96NF6 230 aa11.66□□□□□ -0.54
SGCE-205ENST00000437425 SH2D1AO60880 128 aa11.65□□□□□ -0.54
SGCE-205ENST00000437425 CRIP1P50238 77 aa11.65□□□□□ -0.54
SGCE-205ENST00000437425 SYNJ2BPP57105 145 aa11.65□□□□□ -0.54
SGCE-205ENST00000437425 HIST1H1AQ02539 215 aaPredicted RBP11.65□□□□□ -0.54
SGCE-205ENST00000437425 MRPL54Q6P161 138 aaKnown RBP11.65□□□□□ -0.54
SGCE-205ENST00000437425 AGPAT4-IT1Q9H0P7 198 aa11.65□□□□□ -0.54
SGCE-205ENST00000437425 A0A1B0GXF2 115 aa11.65□□□□□ -0.55
SGCE-205ENST00000437425 PRAC2D3DTV9 90 aa11.65□□□□□ -0.55
SGCE-205ENST00000437425 NDUFA7O95182 113 aa11.65□□□□□ -0.55
SGCE-205ENST00000437425 AKR1D1P51857 326 aa11.65□□□□□ -0.55
SGCE-205ENST00000437425 RAB4BP61018 213 aa11.65□□□□□ -0.55
SGCE-205ENST00000437425 RIGQ13278 110 aa11.65□□□□□ -0.55
SGCE-205ENST00000437425 OR1N2Q8NGR9 330 aa11.65□□□□□ -0.55
SGCE-205ENST00000437425 GTSF1Q8WW33 167 aa11.65□□□□□ -0.55
SGCE-205ENST00000437425 C2orf70A6NJV1 201 aa11.64□□□□□ -0.55
SGCE-205ENST00000437425 HAX1O00165 279 aa11.64□□□□□ -0.55
SGCE-205ENST00000437425 SPINK4O60575 86 aa11.64□□□□□ -0.55
SGCE-205ENST00000437425 APCSP02743 223 aa11.64□□□□□ -0.55
SGCE-205ENST00000437425 S100A2P29034 98 aa11.64□□□□□ -0.55
SGCE-205ENST00000437425 SNRPD3P62318 126 aaKnown RBP11.64□□□□□ -0.55
SGCE-205ENST00000437425 PAFAH1B2P68402 229 aa11.64□□□□□ -0.55
SGCE-205ENST00000437425 ERCC8Q13216 396 aa11.64□□□□□ -0.55
SGCE-205ENST00000437425 Q8TAT8 98 aa11.64□□□□□ -0.55
SGCE-205ENST00000437425 A0A1B0GUT8 65 aa11.63□□□□□ -0.55
SGCE-205ENST00000437425 LY6G6DO95868 133 aa11.63□□□□□ -0.55
SGCE-205ENST00000437425 PGLYRP4Q96LB8 373 aa11.63□□□□□ -0.55
SGCE-205ENST00000437425 OTOGQ6ZRI0 2925 aa11.62□□□□□ -0.55
SGCE-205ENST00000437425 TRAV2A0A0B4J234 112 aa11.62□□□□□ -0.55
SGCE-205ENST00000437425 CRISP2P16562 243 aa11.62□□□□□ -0.55
SGCE-205ENST00000437425 Q0VG73 95 aa11.62□□□□□ -0.55
SGCE-205ENST00000437425 TCTEX1D4Q5JR98 221 aa11.62□□□□□ -0.55
SGCE-205ENST00000437425 KHDC1LQ5JSQ8 128 aa11.62□□□□□ -0.55
SGCE-205ENST00000437425 HIST3H2BBQ8N257 126 aa11.62□□□□□ -0.55
SGCE-205ENST00000437425 KLHL30-AS1Q8NEE0 82 aa11.62□□□□□ -0.55
SGCE-205ENST00000437425 OR11H1Q8NG94 326 aa11.62□□□□□ -0.55
SGCE-205ENST00000437425 DCANP1Q8TF63 244 aa11.62□□□□□ -0.55
SGCE-205ENST00000437425 C20orf173Q96LM9 149 aa11.62□□□□□ -0.55
SGCE-205ENST00000437425 C2CD3Q4AC94 2353 aa11.62□□□□□ -0.55
SGCE-205ENST00000437425 ZNF469Q96JG9 3925 aaPredicted RBP11.62□□□□□ -0.55
SGCE-205ENST00000437425 LINC01559Q495D7 138 aa11.61□□□□□ -0.55
SGCE-205ENST00000437425 OR10J3Q5JRS4 329 aa11.61□□□□□ -0.55
SGCE-205ENST00000437425 OR8A1Q8NGG7 326 aa11.61□□□□□ -0.55
SGCE-205ENST00000437425 GPR61Q9BZJ8 451 aa11.61□□□□□ -0.55
SGCE-205ENST00000437425 MS4A6AQ9H2W1 248 aa11.61□□□□□ -0.55
SGCE-205ENST00000437425 AKAP9Q99996 3911 aa11.61□□□□□ -0.55
SGCE-205ENST00000437425 GATD1Q8NB37 220 aa11.6□□□□□ -0.55
SGCE-205ENST00000437425 OR9G4Q8NGQ1 327 aa11.6□□□□□ -0.55
SGCE-205ENST00000437425 LINC01006Q8NI28 216 aa11.6□□□□□ -0.55
SGCE-205ENST00000437425 TSSC4Q9Y5U2 329 aaPredicted RBP11.6□□□□□ -0.55
SGCE-205ENST00000437425 F2Z2F3 143 aa11.6□□□□□ -0.55
SGCE-205ENST00000437425 K7EQG2 157 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms