RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 C16orf74Q96GX8 76 aa11.6□□□□□ -0.55
SMPD4-207ENST00000435455 Q9H3A6 140 aa11.6□□□□□ -0.55
SMPD4-207ENST00000435455 IGKV2-40A0A087WW87 121 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-207ENST00000435455 G3V3Q6 166 aa11.59□□□□□ -0.55
SMPD4-207ENST00000435455 J3KRW8 73 aa11.59□□□□□ -0.55
SMPD4-207ENST00000435455 IGKV2D-40P01614 121 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-207ENST00000435455 PRM2P04554 102 aa11.59□□□□□ -0.55
SMPD4-207ENST00000435455 SLC25A5P05141 298 aaKnown RBP11.59□□□□□ -0.55
SMPD4-207ENST00000435455 HTN1P15515 57 aa11.59□□□□□ -0.55
SMPD4-207ENST00000435455 AZU1P20160 251 aa11.59□□□□□ -0.55
SMPD4-207ENST00000435455 RPL7L1Q6DKI1 246 aaKnown RBP11.59□□□□□ -0.55
SMPD4-207ENST00000435455 LGALS9CQ6DKI2 356 aa11.59□□□□□ -0.55
SMPD4-207ENST00000435455 IGHV4-4A0A075B6R2 117 aa11.58□□□□□ -0.56
SMPD4-207ENST00000435455 TRAV12-3A0A0B4J271 114 aa11.58□□□□□ -0.56
SMPD4-207ENST00000435455 RBAKDNA6NC62 111 aa11.58□□□□□ -0.56
SMPD4-207ENST00000435455 TAAR5O14804 337 aa11.58□□□□□ -0.56
SMPD4-207ENST00000435455 NMBP08949 121 aa11.58□□□□□ -0.56
SMPD4-207ENST00000435455 CRISP2P16562 243 aa11.58□□□□□ -0.56
SMPD4-207ENST00000435455 FAM74A1Q5RGS3 127 aa11.58□□□□□ -0.56
SMPD4-207ENST00000435455 CCDC28AQ8IWP9 274 aa11.58□□□□□ -0.56
SMPD4-207ENST00000435455 RXFP4Q8TDU9 374 aa11.58□□□□□ -0.56
SMPD4-207ENST00000435455 TMEM263Q8WUH6 116 aaKnown RBP11.58□□□□□ -0.56
SMPD4-207ENST00000435455 FAM19A4Q96LR4 140 aa11.58□□□□□ -0.56
SMPD4-207ENST00000435455 VGLL1Q99990 258 aa11.58□□□□□ -0.56
SMPD4-207ENST00000435455 OTORQ9NRC9 128 aa11.58□□□□□ -0.56
SMPD4-207ENST00000435455 APLNQ9ULZ1 77 aa11.58□□□□□ -0.56
SMPD4-207ENST00000435455 TRBV7-9A0A0J9YWB2 115 aa11.57□□□□□ -0.56
SMPD4-207ENST00000435455 C7orf71A4D174 169 aa11.57□□□□□ -0.56
SMPD4-207ENST00000435455 KLLNB2CW77 178 aa11.57□□□□□ -0.56
SMPD4-207ENST00000435455 EIF3GO75821 320 aaKnown RBP eCLIP11.57□□□□□ -0.56
SMPD4-207ENST00000435455 ZNF138P52744 262 aa11.57□□□□□ -0.56
SMPD4-207ENST00000435455 ARL6IP6Q8N6S5 226 aa11.57□□□□□ -0.56
SMPD4-207ENST00000435455 RAB24Q969Q5 203 aa11.57□□□□□ -0.56
SMPD4-207ENST00000435455 FAM210BQ96KR6 192 aa11.57□□□□□ -0.56
SMPD4-207ENST00000435455 PYGO2Q9BRQ0 406 aa11.57□□□□□ -0.56
SMPD4-207ENST00000435455 SH3BGRL3Q9H299 93 aa11.57□□□□□ -0.56
SMPD4-207ENST00000435455 TIMM8BQ9Y5J9 83 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-207ENST00000435455 PLAC8L1A1L4L8 177 aa11.56□□□□□ -0.56
SMPD4-207ENST00000435455 HMGB3O15347 200 aaKnown RBP11.56□□□□□ -0.56
SMPD4-207ENST00000435455 ARPC5O15511 151 aa11.56□□□□□ -0.56
SMPD4-207ENST00000435455 GPX1P07203 203 aa11.56□□□□□ -0.56
SMPD4-207ENST00000435455 STAG3L2P0CL84 134 aa11.56□□□□□ -0.56
SMPD4-207ENST00000435455 STAG3L3P0CL85 134 aa11.56□□□□□ -0.56
SMPD4-207ENST00000435455 ARL14EPLP0DKL9 152 aa11.56□□□□□ -0.56
SMPD4-207ENST00000435455 RNASE8Q8TDE3 154 aaKnown RBP11.56□□□□□ -0.56
SMPD4-207ENST00000435455 ACTR3CQ9C0K3 210 aaPredicted RBP11.56□□□□□ -0.56
SMPD4-207ENST00000435455 PLA2G2EQ9NZK7 142 aa11.56□□□□□ -0.56
SMPD4-207ENST00000435455 ZNF492Q9P255 531 aa11.56□□□□□ -0.56
SMPD4-207ENST00000435455 PGPA6NDG6 321 aa11.55□□□□□ -0.56
SMPD4-207ENST00000435455 DIRC3C9JPN6 131 aa11.55□□□□□ -0.56
SMPD4-207ENST00000435455 RNASE4P34096 147 aaKnown RBP11.55□□□□□ -0.56
SMPD4-207ENST00000435455 CMTM2Q8TAZ6 248 aa11.55□□□□□ -0.56
SMPD4-207ENST00000435455 HYLS1Q96M11 299 aa11.55□□□□□ -0.56
SMPD4-207ENST00000435455 NDUFAF3Q9BU61 184 aa11.55□□□□□ -0.56
SMPD4-207ENST00000435455 LENEPQ9Y5L5 61 aa11.55□□□□□ -0.56
SMPD4-207ENST00000435455 DEFB130BP0DP73 79 aa11.54□□□□□ -0.56
SMPD4-207ENST00000435455 DEFB130AP0DP74 79 aa11.54□□□□□ -0.56
SMPD4-207ENST00000435455 HTN3P15516 51 aa11.54□□□□□ -0.56
SMPD4-207ENST00000435455 ZFAND2AQ8N6M9 145 aa11.54□□□□□ -0.56
SMPD4-207ENST00000435455 LINC00467Q9BRT7 94 aa11.54□□□□□ -0.56
SMPD4-207ENST00000435455 SNURFLB1AK76 121 aa11.53□□□□□ -0.56
SMPD4-207ENST00000435455 SMLR1H3BR10 107 aa11.53□□□□□ -0.56
SMPD4-207ENST00000435455 ZNF324O75467 553 aaPredicted RBP11.53□□□□□ -0.56
SMPD4-207ENST00000435455 CXorf1O96002 111 aa11.53□□□□□ -0.56
SMPD4-207ENST00000435455 GCHFRP30047 84 aa11.53□□□□□ -0.56
SMPD4-207ENST00000435455 CD300CQ08708 224 aa11.53□□□□□ -0.56
SMPD4-207ENST00000435455 BTN1A1Q13410 526 aa11.53□□□□□ -0.56
SMPD4-207ENST00000435455 ZNF345Q14585 488 aa11.53□□□□□ -0.56
SMPD4-207ENST00000435455 SUN5Q8TC36 379 aa11.53□□□□□ -0.56
SMPD4-207ENST00000435455 TMED6Q8WW62 240 aa11.53□□□□□ -0.56
SMPD4-207ENST00000435455 NOP10Q9NPE3 64 aaKnown RBP11.53□□□□□ -0.56
SMPD4-207ENST00000435455 TMEM167BQ9NRX6 74 aa11.53□□□□□ -0.56
SMPD4-207ENST00000435455 HYDINQ4G0P3 5121 aa11.53□□□□□ -0.56
SMPD4-207ENST00000435455 CBY3A6NI87 242 aa11.52□□□□□ -0.57
SMPD4-207ENST00000435455 HMSDA8MTL9 139 aa11.52□□□□□ -0.57
SMPD4-207ENST00000435455 AKR1C8PQ5T2L2 129 aa11.52□□□□□ -0.57
SMPD4-207ENST00000435455 KCNRGQ8N5I3 272 aa11.52□□□□□ -0.57
SMPD4-207ENST00000435455 EIF4E3Q8N5X7 224 aaKnown RBP11.52□□□□□ -0.57
SMPD4-207ENST00000435455 ZNF680Q8NEM1 530 aa11.52□□□□□ -0.57
SMPD4-207ENST00000435455 Q8TAT8 98 aa11.52□□□□□ -0.57
SMPD4-207ENST00000435455 RPH3ALQ9UNE2 315 aa11.52□□□□□ -0.57
SMPD4-207ENST00000435455 CTXND1A0A1B0GTU2 59 aa11.51□□□□□ -0.57
SMPD4-207ENST00000435455 ATP5G1P05496 136 aa11.51□□□□□ -0.57
SMPD4-207ENST00000435455 ATP5G3P48201 142 aa11.51□□□□□ -0.57
SMPD4-207ENST00000435455 ANXA2RQ3ZCQ2 193 aa11.51□□□□□ -0.57
SMPD4-207ENST00000435455 GOLT1AQ6ZVE7 132 aa11.51□□□□□ -0.57
SMPD4-207ENST00000435455 ST6GAL2Q96JF0 529 aa11.51□□□□□ -0.57
SMPD4-207ENST00000435455 ARPC5LQ9BPX5 153 aa11.51□□□□□ -0.57
SMPD4-207ENST00000435455 CYTL1Q9NRR1 136 aa11.51□□□□□ -0.57
SMPD4-207ENST00000435455 A0A0D9SG52 128 aa11.5□□□□□ -0.57
SMPD4-207ENST00000435455 SERTM2A0A1B0GWG4 89 aa11.5□□□□□ -0.57
SMPD4-207ENST00000435455 RGS13O14921 159 aa11.5□□□□□ -0.57
SMPD4-207ENST00000435455 PRR9Q5T870 116 aa11.5□□□□□ -0.57
SMPD4-207ENST00000435455 C5orf17Q8NAS9 161 aa11.5□□□□□ -0.57
SMPD4-207ENST00000435455 IGHV1OR15-1A0A075B7D0 117 aa11.49□□□□□ -0.57
SMPD4-207ENST00000435455 P0DMU3 169 aa11.49□□□□□ -0.57
SMPD4-207ENST00000435455 FAM231AP0DMU4 169 aa11.49□□□□□ -0.57
SMPD4-207ENST00000435455 FAM231CP0DMU5 169 aa11.49□□□□□ -0.57
SMPD4-207ENST00000435455 DAZ2Q13117 558 aaKnown RBP11.49□□□□□ -0.57
SMPD4-207ENST00000435455 SSX7Q7RTT5 188 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms