RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 FNDC10F2Z333 226 aa12.19□□□□□ -0.46
SCARF1-203ENST00000434376 OR5AL1P0C617 328 aa12.19□□□□□ -0.46
SCARF1-203ENST00000434376 C11orf71Q6IPW1 123 aa12.19□□□□□ -0.46
SCARF1-203ENST00000434376 LY6LH3BQJ8 138 aa12.19□□□□□ -0.46
SCARF1-203ENST00000434376 IGHV4-39P01824 125 aa12.19□□□□□ -0.46
SCARF1-203ENST00000434376 APOHP02749 345 aaPredicted RBP12.19□□□□□ -0.46
SCARF1-203ENST00000434376 FAM106CPP0CH98 169 aa12.19□□□□□ -0.46
SCARF1-203ENST00000434376 ST20Q9HBF5 79 aa12.19□□□□□ -0.46
SCARF1-203ENST00000434376 IGHV7-81A0A0B4J1V7 117 aa12.18□□□□□ -0.46
SCARF1-203ENST00000434376 FSTL3O95633 263 aa12.18□□□□□ -0.46
SCARF1-203ENST00000434376 TMEM95Q3KNT9 176 aa12.18□□□□□ -0.46
SCARF1-203ENST00000434376 FA2HQ7L5A8 372 aa12.18□□□□□ -0.46
SCARF1-203ENST00000434376 STXBP6Q8NFX7 210 aa12.18□□□□□ -0.46
SCARF1-203ENST00000434376 MBD6Q96DN6 1003 aa12.18□□□□□ -0.46
SCARF1-203ENST00000434376 AAMDCQ9H7C9 122 aa12.18□□□□□ -0.46
SCARF1-203ENST00000434376 H3BUT2 72 aa12.18□□□□□ -0.46
SCARF1-203ENST00000434376 K7ERU9 68 aa12.18□□□□□ -0.46
SCARF1-203ENST00000434376 ORM1P02763 201 aa12.18□□□□□ -0.46
SCARF1-203ENST00000434376 CRYGCP07315 174 aa12.18□□□□□ -0.46
SCARF1-203ENST00000434376 ARMS2P0C7Q2 107 aa12.18□□□□□ -0.46
SCARF1-203ENST00000434376 EFNA4P52798 201 aa12.18□□□□□ -0.46
SCARF1-203ENST00000434376 NIPBLQ6KC79 2804 aaeCLIP12.18□□□□□ -0.46
SCARF1-203ENST00000434376 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.17□□□□□ -0.46
SCARF1-203ENST00000434376 IGHV4-38-2P0DP08 117 aa12.17□□□□□ -0.46
SCARF1-203ENST00000434376 ATP5IP56385 69 aaPredicted RBP12.17□□□□□ -0.46
SCARF1-203ENST00000434376 FBXL19-AS1Q494R0 122 aa12.17□□□□□ -0.46
SCARF1-203ENST00000434376 FAM71F2Q6NXP2 309 aa12.17□□□□□ -0.46
SCARF1-203ENST00000434376 CT45A10P0DMU9 189 aa12.17□□□□□ -0.46
SCARF1-203ENST00000434376 GLMPQ8WWB7 406 aa12.17□□□□□ -0.46
SCARF1-203ENST00000434376 ITPR2Q14571 2701 aa12.17□□□□□ -0.46
SCARF1-203ENST00000434376 SMKR1H3BMG3 65 aa12.17□□□□□ -0.46
SCARF1-203ENST00000434376 CCDC144NLQ6NUI1 221 aa12.17□□□□□ -0.46
SCARF1-203ENST00000434376 ZNF562Q6V9R5 426 aa12.17□□□□□ -0.46
SCARF1-203ENST00000434376 CCL19Q99731 98 aa12.17□□□□□ -0.46
SCARF1-203ENST00000434376 PSG8Q9UQ74 426 aa12.17□□□□□ -0.46
SCARF1-203ENST00000434376 ITPR3Q14573 2671 aa12.17□□□□□ -0.46
SCARF1-203ENST00000434376 LY6G5BQ8NDX9 201 aa12.16□□□□□ -0.46
SCARF1-203ENST00000434376 OR11H6Q8NGC7 330 aa12.16□□□□□ -0.46
SCARF1-203ENST00000434376 C7orf69Q9H7B7 122 aa12.16□□□□□ -0.46
SCARF1-203ENST00000434376 NMUP48645 174 aa12.16□□□□□ -0.46
SCARF1-203ENST00000434376 PRSS57Q6UWY2 283 aa12.16□□□□□ -0.46
SCARF1-203ENST00000434376 VGLL1Q99990 258 aa12.16□□□□□ -0.46
SCARF1-203ENST00000434376 FAM231BA6NCW3 169 aa12.16□□□□□ -0.46
SCARF1-203ENST00000434376 TMEM213A2RRL7 107 aa12.15□□□□□ -0.46
SCARF1-203ENST00000434376 CSN1S1P47710 185 aa12.15□□□□□ -0.46
SCARF1-203ENST00000434376 Q6ZQT7 251 aa12.15□□□□□ -0.46
SCARF1-203ENST00000434376 Q86TA4 180 aa12.15□□□□□ -0.46
SCARF1-203ENST00000434376 AP5S1Q9NUS5 200 aa12.15□□□□□ -0.46
SCARF1-203ENST00000434376 TRBV19A0A075B6N1 114 aa12.15□□□□□ -0.46
SCARF1-203ENST00000434376 IGHV4-30-2A0A087WSY4 118 aa12.15□□□□□ -0.46
SCARF1-203ENST00000434376 GOSR1O95249 250 aa12.15□□□□□ -0.46
SCARF1-203ENST00000434376 PF4V1P10720 104 aa12.15□□□□□ -0.46
SCARF1-203ENST00000434376 RPL24P83731 157 aaKnown RBP12.15□□□□□ -0.46
SCARF1-203ENST00000434376 Q6ZS46 218 aa12.15□□□□□ -0.46
SCARF1-203ENST00000434376 DEFB125Q8N687 156 aa12.15□□□□□ -0.46
SCARF1-203ENST00000434376 Q8N9W7 124 aa12.15□□□□□ -0.46
SCARF1-203ENST00000434376 THYN1Q9P016 225 aa12.15□□□□□ -0.46
SCARF1-203ENST00000434376 NCR2O95944 276 aa12.14□□□□□ -0.47
SCARF1-203ENST00000434376 BLCAPP62952 87 aa12.14□□□□□ -0.47
SCARF1-203ENST00000434376 RBPMS2Q6ZRY4 209 aaKnown RBP12.14□□□□□ -0.47
SCARF1-203ENST00000434376 C8orf31Q8N9H6 132 aa12.14□□□□□ -0.47
SCARF1-203ENST00000434376 SHANK2-AS3Q9BTD1 123 aa12.14□□□□□ -0.47
SCARF1-203ENST00000434376 PRAC2D3DTV9 90 aa12.14□□□□□ -0.47
SCARF1-203ENST00000434376 LMO4P61968 165 aa12.14□□□□□ -0.47
SCARF1-203ENST00000434376 KLF5Q13887 457 aaPredicted RBP12.14□□□□□ -0.47
SCARF1-203ENST00000434376 PEF1Q9UBV8 284 aaKnown RBP12.14□□□□□ -0.47
SCARF1-203ENST00000434376 HSPB8Q9UJY1 196 aa12.14□□□□□ -0.47
SCARF1-203ENST00000434376 TRBV12-3P01733 135 aa12.14□□□□□ -0.47
SCARF1-203ENST00000434376 H3BUX3 64 aa12.13□□□□□ -0.47
SCARF1-203ENST00000434376 WIPF2Q8TF74 440 aaPredicted RBP12.13□□□□□ -0.47
SCARF1-203ENST00000434376 CENPVL3A0A0U1RRI6 287 aa12.13□□□□□ -0.47
SCARF1-203ENST00000434376 K7EQM0 130 aa12.13□□□□□ -0.47
SCARF1-203ENST00000434376 NPFFO15130 113 aa12.13□□□□□ -0.47
SCARF1-203ENST00000434376 CTSGP08311 255 aa12.13□□□□□ -0.47
SCARF1-203ENST00000434376 FAM106AQ4KMX7 169 aa12.13□□□□□ -0.47
SCARF1-203ENST00000434376 FAM162BQ5T6X4 162 aa12.13□□□□□ -0.47
SCARF1-203ENST00000434376 FLNBO75369 2602 aaKnown RBP12.13□□□□□ -0.47
SCARF1-203ENST00000434376 AGRNO00468 2067 aa12.13□□□□□ -0.47
SCARF1-203ENST00000434376 M0R1W7 72 aa12.13□□□□□ -0.47
SCARF1-203ENST00000434376 C1RLQ9NZP8 487 aa12.13□□□□□ -0.47
SCARF1-203ENST00000434376 TRGV3P03979 118 aa12.12□□□□□ -0.47
SCARF1-203ENST00000434376 HIST1H1AQ02539 215 aaPredicted RBP12.12□□□□□ -0.47
SCARF1-203ENST00000434376 RASL11AQ6T310 242 aa12.12□□□□□ -0.47
SCARF1-203ENST00000434376 FAM231DQ6ZW35 169 aa12.12□□□□□ -0.47
SCARF1-203ENST00000434376 C18orf15Q96N68 181 aa12.12□□□□□ -0.47
SCARF1-203ENST00000434376 OTORQ9NRC9 128 aa12.12□□□□□ -0.47
SCARF1-203ENST00000434376 RABAC1Q9UI14 185 aa12.12□□□□□ -0.47
SCARF1-203ENST00000434376 IGKV3-20P01619 116 aa12.12□□□□□ -0.47
SCARF1-203ENST00000434376 TMEM97Q5BJF2 176 aa12.12□□□□□ -0.47
SCARF1-203ENST00000434376 SIGLEC15Q6ZMC9 328 aa12.12□□□□□ -0.47
SCARF1-203ENST00000434376 IGLV11-55A0A075B6I3 123 aa12.11□□□□□ -0.47
SCARF1-203ENST00000434376 ZNF414Q96IQ9 312 aa12.11□□□□□ -0.47
SCARF1-203ENST00000434376 SIRPDQ9H106 197 aa12.11□□□□□ -0.47
SCARF1-203ENST00000434376 SCRT2Q9NQ03 307 aa12.11□□□□□ -0.47
SCARF1-203ENST00000434376 MSRB1Q9NZV6 116 aa12.11□□□□□ -0.47
SCARF1-203ENST00000434376 ODF3BA8MYP8 253 aa12.11□□□□□ -0.47
SCARF1-203ENST00000434376 CLEC2AQ6UVW9 174 aa12.11□□□□□ -0.47
SCARF1-203ENST00000434376 ATP5L2Q7Z4Y8 100 aa12.11□□□□□ -0.47
SCARF1-203ENST00000434376 FMC1Q96HJ9 113 aa12.11□□□□□ -0.47
SCARF1-203ENST00000434376 A0A1B0GXF2 115 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms