RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 PEX7O00628 323 aa12.23□□□□□ -0.45
TTC28-202ENST00000431039 TCRAP04437 139 aa12.23□□□□□ -0.45
TTC28-202ENST00000431039 SRP19P09132 144 aaKnown RBP12.23□□□□□ -0.45
TTC28-202ENST00000431039 PSMG4Q5JS54 123 aa12.23□□□□□ -0.45
TTC28-202ENST00000431039 ZNF738Q8NE65 137 aa12.23□□□□□ -0.45
TTC28-202ENST00000431039 ATG101Q9BSB4 218 aa12.23□□□□□ -0.45
TTC28-202ENST00000431039 SCO2A0A1W2PP80 73 aa12.22□□□□□ -0.45
TTC28-202ENST00000431039 GNG5P63218 68 aa12.22□□□□□ -0.45
TTC28-202ENST00000431039 SLC35B3Q9H1N7 401 aa12.22□□□□□ -0.45
TTC28-202ENST00000431039 MAP6D1Q9H9H5 199 aa12.22□□□□□ -0.45
TTC28-202ENST00000431039 TREM1Q9NP99 234 aa12.22□□□□□ -0.45
TTC28-202ENST00000431039 RBAKDNA6NC62 111 aa12.21□□□□□ -0.45
TTC28-202ENST00000431039 PRAC2D3DTV9 90 aa12.21□□□□□ -0.45
TTC28-202ENST00000431039 DEFB131AP59861 70 aa12.21□□□□□ -0.45
TTC28-202ENST00000431039 ODF3L2Q3SX64 289 aa12.21□□□□□ -0.45
TTC28-202ENST00000431039 GOLT1AQ6ZVE7 132 aa12.21□□□□□ -0.45
TTC28-202ENST00000431039 CYB561D1Q8N8Q1 229 aa12.21□□□□□ -0.45
TTC28-202ENST00000431039 C2CD4CQ8TF44 421 aa12.21□□□□□ -0.45
TTC28-202ENST00000431039 K7EQM0 130 aa12.2□□□□□ -0.46
TTC28-202ENST00000431039 RPH3ALQ9UNE2 315 aa12.2□□□□□ -0.46
TTC28-202ENST00000431039 KLF12Q9Y4X4 402 aa12.2□□□□□ -0.46
TTC28-202ENST00000431039 FBLL1A6NHQ2 334 aaKnown RBP12.19□□□□□ -0.46
TTC28-202ENST00000431039 OR11H12B2RN74 326 aa12.19□□□□□ -0.46
TTC28-202ENST00000431039 S100A9P06702 114 aaKnown RBP12.19□□□□□ -0.46
TTC28-202ENST00000431039 AKR1C3P42330 323 aa12.19□□□□□ -0.46
TTC28-202ENST00000431039 FOXI2Q6ZQN5 318 aa12.19□□□□□ -0.46
TTC28-202ENST00000431039 OR8A1Q8NGG7 326 aa12.19□□□□□ -0.46
TTC28-202ENST00000431039 OR10J6PQ8NGY7 276 aa12.19□□□□□ -0.46
TTC28-202ENST00000431039 WFDC10AQ9H1F0 79 aa12.19□□□□□ -0.46
TTC28-202ENST00000431039 SAV1Q9H4B6 383 aaPredicted RBP12.19□□□□□ -0.46
TTC28-202ENST00000431039 IGKV2-40A0A087WW87 121 aaPredicted RBP12.18□□□□□ -0.46
TTC28-202ENST00000431039 A0A0J9YX75 114 aa12.18□□□□□ -0.46
TTC28-202ENST00000431039 TRBV6-1A0A0K0K1D8 114 aa12.18□□□□□ -0.46
TTC28-202ENST00000431039 IGKV2D-40P01614 121 aaPredicted RBP12.18□□□□□ -0.46
TTC28-202ENST00000431039 CD7P09564 240 aa12.18□□□□□ -0.46
TTC28-202ENST00000431039 CNN1P51911 297 aaKnown RBP12.18□□□□□ -0.46
TTC28-202ENST00000431039 EBLN2Q6P2I7 272 aa12.18□□□□□ -0.46
TTC28-202ENST00000431039 C9orf47Q6ZRZ4 202 aa12.18□□□□□ -0.46
TTC28-202ENST00000431039 SLC7A5P1Q8MH63 180 aa12.18□□□□□ -0.46
TTC28-202ENST00000431039 DEFB125Q8N687 156 aa12.18□□□□□ -0.46
TTC28-202ENST00000431039 TMEM75Q8N9X5 138 aa12.18□□□□□ -0.46
TTC28-202ENST00000431039 LINC00479Q96M42 142 aa12.18□□□□□ -0.46
TTC28-202ENST00000431039 TMEM218A2RU14 115 aa12.17□□□□□ -0.46
TTC28-202ENST00000431039 NPIPB6E9PJ23 425 aa12.17□□□□□ -0.46
TTC28-202ENST00000431039 F6UB75 175 aa12.17□□□□□ -0.46
TTC28-202ENST00000431039 DUSP14O95147 198 aaKnown RBP12.17□□□□□ -0.46
TTC28-202ENST00000431039 IGLV2-11P01706 119 aa12.17□□□□□ -0.46
TTC28-202ENST00000431039 TAS2R60P59551 318 aa12.17□□□□□ -0.46
TTC28-202ENST00000431039 DEFB1P60022 68 aa12.17□□□□□ -0.46
TTC28-202ENST00000431039 TMEM183BQ1AE95 376 aa12.17□□□□□ -0.46
TTC28-202ENST00000431039 LINC00322Q6ZN03 302 aaPredicted RBP12.17□□□□□ -0.46
TTC28-202ENST00000431039 IL17DQ8TAD2 202 aa12.17□□□□□ -0.46
TTC28-202ENST00000431039 FMC1Q96HJ9 113 aa12.17□□□□□ -0.46
TTC28-202ENST00000431039 LINC00477Q96M19 166 aa12.17□□□□□ -0.46
TTC28-202ENST00000431039 VGLL1Q99990 258 aa12.17□□□□□ -0.46
TTC28-202ENST00000431039 AGPAT4-IT1Q9H0P7 198 aa12.17□□□□□ -0.46
TTC28-202ENST00000431039 PPP1R14DQ9NXH3 145 aa12.17□□□□□ -0.46
TTC28-202ENST00000431039 TRAV34A0A0B4J273 112 aa12.16□□□□□ -0.46
TTC28-202ENST00000431039 RBMY1BA6NDE4 496 aaKnown RBP12.16□□□□□ -0.46
TTC28-202ENST00000431039 RBMY1EA6NEQ0 496 aaKnown RBP12.16□□□□□ -0.46
TTC28-202ENST00000431039 SFTA3P0C7M3 94 aa12.16□□□□□ -0.46
TTC28-202ENST00000431039 RBMY1DP0C7P1 496 aaKnown RBP12.16□□□□□ -0.46
TTC28-202ENST00000431039 RPL35P42766 123 aaKnown RBP12.16□□□□□ -0.46
TTC28-202ENST00000431039 FAM74A3Q4VXF1 159 aa12.16□□□□□ -0.46
TTC28-202ENST00000431039 SOHLH1Q5JUK2 328 aa12.16□□□□□ -0.46
TTC28-202ENST00000431039 PARLQ9H300 379 aa12.16□□□□□ -0.46
TTC28-202ENST00000431039 SRD5A3Q9H8P0 318 aa12.16□□□□□ -0.46
TTC28-202ENST00000431039 PSG8Q9UQ74 426 aa12.16□□□□□ -0.46
TTC28-202ENST00000431039 KNCNA6PVL3 124 aa12.15□□□□□ -0.46
TTC28-202ENST00000431039 A8MTW9 85 aa12.15□□□□□ -0.46
TTC28-202ENST00000431039 H3BMM0 161 aa12.15□□□□□ -0.46
TTC28-202ENST00000431039 PRB4P10163 310 aaPredicted RBP12.15□□□□□ -0.46
TTC28-202ENST00000431039 HLA-DRB4P13762 266 aa12.15□□□□□ -0.46
TTC28-202ENST00000431039 CEBPGP53567 150 aa12.15□□□□□ -0.46
TTC28-202ENST00000431039 UBE2G1P62253 170 aa12.15□□□□□ -0.46
TTC28-202ENST00000431039 FLI1Q01543 452 aaPredicted RBP12.15□□□□□ -0.46
TTC28-202ENST00000431039 HIST1H1AQ02539 215 aaPredicted RBP12.15□□□□□ -0.46
TTC28-202ENST00000431039 ERCC8Q13216 396 aa12.15□□□□□ -0.46
TTC28-202ENST00000431039 TMEM78Q5T7P6 136 aa12.15□□□□□ -0.46
TTC28-202ENST00000431039 GDF5OSQ5U4N7 250 aa12.15□□□□□ -0.46
TTC28-202ENST00000431039 APRG1Q8IVJ8 170 aa12.15□□□□□ -0.46
TTC28-202ENST00000431039 CLUHP3Q96NS8 147 aa12.15□□□□□ -0.46
TTC28-202ENST00000431039 DERL1Q9BUN8 251 aa12.15□□□□□ -0.46
TTC28-202ENST00000431039 HLA-DRB4X5D2U9 266 aa12.15□□□□□ -0.46
TTC28-202ENST00000431039 TRAV8-1A0A0A6YYK1 113 aa12.14□□□□□ -0.47
TTC28-202ENST00000431039 ZNF705DP0CH99 300 aaPredicted RBP12.14□□□□□ -0.47
TTC28-202ENST00000431039 ZNF705BP0CI00 300 aaPredicted RBP12.14□□□□□ -0.47
TTC28-202ENST00000431039 ZNF138P52744 262 aa12.14□□□□□ -0.47
TTC28-202ENST00000431039 ACTL10Q5JWF8 245 aa12.14□□□□□ -0.47
TTC28-202ENST00000431039 ZNF492Q9P255 531 aa12.14□□□□□ -0.47
TTC28-202ENST00000431039 LENEPQ9Y5L5 61 aa12.14□□□□□ -0.47
TTC28-202ENST00000431039 TRBV7-9A0A0J9YWB2 115 aa12.13□□□□□ -0.47
TTC28-202ENST00000431039 ZNF727A8MUV8 499 aa12.13□□□□□ -0.47
TTC28-202ENST00000431039 C9JCJ5 164 aa12.13□□□□□ -0.47
TTC28-202ENST00000431039 ZNF124Q15973 351 aa12.13□□□□□ -0.47
TTC28-202ENST00000431039 ZNF674Q2M3X9 581 aa12.13□□□□□ -0.47
TTC28-202ENST00000431039 Q86TA4 180 aa12.13□□□□□ -0.47
TTC28-202ENST00000431039 BAGE2Q86Y30 109 aa12.13□□□□□ -0.47
TTC28-202ENST00000431039 SGK494Q96LW2 274 aa12.13□□□□□ -0.47
TTC28-202ENST00000431039 ODF3Q96PU9 254 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms