RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 FMC1Q96HJ9 113 aa12.64□□□□□ -0.39
LINC00887-203ENST00000429578 SGK494Q96LW2 274 aa12.64□□□□□ -0.39
LINC00887-203ENST00000429578 PARLQ9H300 379 aa12.64□□□□□ -0.39
LINC00887-203ENST00000429578 TRAV34A0A0B4J273 112 aa12.63□□□□□ -0.39
LINC00887-203ENST00000429578 KNCNA6PVL3 124 aa12.63□□□□□ -0.39
LINC00887-203ENST00000429578 S100A9P06702 114 aaKnown RBP12.63□□□□□ -0.39
LINC00887-203ENST00000429578 HLA-DRB4P13762 266 aa12.63□□□□□ -0.39
LINC00887-203ENST00000429578 UBE2G1P62253 170 aa12.63□□□□□ -0.39
LINC00887-203ENST00000429578 ERCC8Q13216 396 aa12.63□□□□□ -0.39
LINC00887-203ENST00000429578 LINC00477Q96M19 166 aa12.63□□□□□ -0.39
LINC00887-203ENST00000429578 CITED4Q96RK1 184 aa12.63□□□□□ -0.39
LINC00887-203ENST00000429578 AGPAT4-IT1Q9H0P7 198 aa12.63□□□□□ -0.39
LINC00887-203ENST00000429578 HLA-DRB4X5D2U9 266 aa12.63□□□□□ -0.39
LINC00887-203ENST00000429578 PRKDCP78527 4128 aaKnown RBP12.63□□□□□ -0.39
LINC00887-203ENST00000429578 DUSP14O95147 198 aaKnown RBP12.62□□□□□ -0.39
LINC00887-203ENST00000429578 SFTA3P0C7M3 94 aa12.62□□□□□ -0.39
LINC00887-203ENST00000429578 FLI1Q01543 452 aaPredicted RBP12.62□□□□□ -0.39
LINC00887-203ENST00000429578 TMEM78Q5T7P6 136 aa12.62□□□□□ -0.39
LINC00887-203ENST00000429578 Q8N1Y9 231 aa12.62□□□□□ -0.39
LINC00887-203ENST00000429578 PRR25Q96S07 402 aa12.62□□□□□ -0.39
LINC00887-203ENST00000429578 WFDC10AQ9H1F0 79 aa12.62□□□□□ -0.39
LINC00887-203ENST00000429578 H3BMM0 161 aa12.62□□□□□ -0.39
LINC00887-203ENST00000429578 TAS2R60P59551 318 aa12.62□□□□□ -0.39
LINC00887-203ENST00000429578 SOHLH1Q5JUK2 328 aa12.62□□□□□ -0.39
LINC00887-203ENST00000429578 PPP1R14DQ9NXH3 145 aa12.62□□□□□ -0.39
LINC00887-203ENST00000429578 PSG8Q9UQ74 426 aa12.62□□□□□ -0.39
LINC00887-203ENST00000429578 TRBV6-1A0A0K0K1D8 114 aa12.61□□□□□ -0.39
LINC00887-203ENST00000429578 TMEM218A2RU14 115 aa12.61□□□□□ -0.39
LINC00887-203ENST00000429578 ZNF138P52744 262 aa12.61□□□□□ -0.39
LINC00887-203ENST00000429578 ZNF674Q2M3X9 581 aa12.61□□□□□ -0.39
LINC00887-203ENST00000429578 OR4B1Q8NGF8 309 aa12.61□□□□□ -0.39
LINC00887-203ENST00000429578 ZNF492Q9P255 531 aa12.61□□□□□ -0.39
LINC00887-203ENST00000429578 NOTCH1P46531 2555 aa12.61□□□□□ -0.39
LINC00887-203ENST00000429578 ZNF727A8MUV8 499 aa12.6□□□□□ -0.39
LINC00887-203ENST00000429578 PRNTQ86SH4 94 aa12.6□□□□□ -0.39
LINC00887-203ENST00000429578 Q86TA4 180 aa12.6□□□□□ -0.39
LINC00887-203ENST00000429578 STHQ8IWL8 128 aa12.6□□□□□ -0.39
LINC00887-203ENST00000429578 DEFB125Q8N687 156 aa12.6□□□□□ -0.39
LINC00887-203ENST00000429578 Q8TAT8 98 aa12.6□□□□□ -0.39
LINC00887-203ENST00000429578 SMIM7Q9BQ49 75 aa12.6□□□□□ -0.39
LINC00887-203ENST00000429578 TRBV20OR9-2A0A075B6H5 130 aa12.59□□□□□ -0.39
LINC00887-203ENST00000429578 A8MTW9 85 aa12.59□□□□□ -0.39
LINC00887-203ENST00000429578 CT45A10P0DMU9 189 aa12.59□□□□□ -0.39
LINC00887-203ENST00000429578 FAM74A3Q4VXF1 159 aa12.59□□□□□ -0.39
LINC00887-203ENST00000429578 KPRPQ5T749 579 aaPredicted RBP12.59□□□□□ -0.39
LINC00887-203ENST00000429578 CLUHP3Q96NS8 147 aa12.59□□□□□ -0.39
LINC00887-203ENST00000429578 LENEPQ9Y5L5 61 aa12.59□□□□□ -0.39
LINC00887-203ENST00000429578 C9JCJ5 164 aa12.59□□□□□ -0.39
LINC00887-203ENST00000429578 LTAP01374 205 aa12.59□□□□□ -0.39
LINC00887-203ENST00000429578 IGKV3-20P01619 116 aa12.59□□□□□ -0.39
LINC00887-203ENST00000429578 CENPWQ5EE01 88 aa12.59□□□□□ -0.39
LINC00887-203ENST00000429578 IGF2BP2-AS1Q96M15 143 aa12.59□□□□□ -0.39
LINC00887-203ENST00000429578 ODF3Q96PU9 254 aa12.59□□□□□ -0.39
LINC00887-203ENST00000429578 ZFP30Q9Y2G7 519 aa12.59□□□□□ -0.39
LINC00887-203ENST00000429578 GNG4P50150 75 aa12.58□□□□□ -0.4
LINC00887-203ENST00000429578 SAPCD1Q5SSQ6 148 aa12.58□□□□□ -0.4
LINC00887-203ENST00000429578 TRPT1Q86TN4 253 aaKnown RBP12.58□□□□□ -0.4
LINC00887-203ENST00000429578 TVP23CQ96ET8 276 aa12.58□□□□□ -0.4
LINC00887-203ENST00000429578 FAM19A4Q96LR4 140 aa12.58□□□□□ -0.4
LINC00887-203ENST00000429578 NDFIP1Q9BT67 221 aa12.58□□□□□ -0.4
LINC00887-203ENST00000429578 TRBV7-9A0A0J9YWB2 115 aa12.57□□□□□ -0.4
LINC00887-203ENST00000429578 AMTNQ6UX39 209 aa12.57□□□□□ -0.4
LINC00887-203ENST00000429578 BAGE2Q86Y30 109 aa12.57□□□□□ -0.4
LINC00887-203ENST00000429578 ASCL2Q99929 193 aa12.57□□□□□ -0.4
LINC00887-203ENST00000429578 F8W036 122 aa12.57□□□□□ -0.4
LINC00887-203ENST00000429578 ADCYAP1P18509 176 aa12.57□□□□□ -0.4
LINC00887-203ENST00000429578 TMEM183AQ8IXX5 376 aa12.57□□□□□ -0.4
LINC00887-203ENST00000429578 SMIM12Q96EX1 92 aa12.57□□□□□ -0.4
LINC00887-203ENST00000429578 SEC11CQ9BY50 192 aa12.57□□□□□ -0.4
LINC00887-203ENST00000429578 SRD5A3Q9H8P0 318 aa12.57□□□□□ -0.4
LINC00887-203ENST00000429578 RBMY1BA6NDE4 496 aaKnown RBP12.56□□□□□ -0.4
LINC00887-203ENST00000429578 RBMY1EA6NEQ0 496 aaKnown RBP12.56□□□□□ -0.4
LINC00887-203ENST00000429578 RBMY1DP0C7P1 496 aaKnown RBP12.56□□□□□ -0.4
LINC00887-203ENST00000429578 MLST8Q9BVC4 326 aa12.56□□□□□ -0.4
LINC00887-203ENST00000429578 PGPEP1LA6NFU8 196 aa12.55□□□□□ -0.4
LINC00887-203ENST00000429578 IGLV2-8P01709 118 aa12.55□□□□□ -0.4
LINC00887-203ENST00000429578 CRISP2P16562 243 aa12.55□□□□□ -0.4
LINC00887-203ENST00000429578 TMEM241Q24JQ0 296 aa12.55□□□□□ -0.4
LINC00887-203ENST00000429578 NHLRC2Q8NBF2 726 aa12.55□□□□□ -0.4
LINC00887-203ENST00000429578 C8orf49Q96NF6 230 aa12.55□□□□□ -0.4
LINC00887-203ENST00000429578 NIPSNAP3BQ9BS92 247 aa12.55□□□□□ -0.4
LINC00887-203ENST00000429578 NAT8Q9UHE5 227 aa12.55□□□□□ -0.4
LINC00887-203ENST00000429578 KRBOX1C9JBD0 128 aa12.54□□□□□ -0.4
LINC00887-203ENST00000429578 PRB2P02812 416 aaPredicted RBP12.54□□□□□ -0.4
LINC00887-203ENST00000429578 TSPOP30536 169 aa12.54□□□□□ -0.4
LINC00887-203ENST00000429578 CDKN1BP46527 198 aa12.54□□□□□ -0.4
LINC00887-203ENST00000429578 C10orf91Q5T1B1 145 aa12.54□□□□□ -0.4
LINC00887-203ENST00000429578 COX8CQ7Z4L0 72 aa12.54□□□□□ -0.4
LINC00887-203ENST00000429578 ZFAND2AQ8N6M9 145 aa12.54□□□□□ -0.4
LINC00887-203ENST00000429578 OCC1Q8TAD7 63 aa12.54□□□□□ -0.4
LINC00887-203ENST00000429578 LY96Q9Y6Y9 160 aa12.54□□□□□ -0.4
LINC00887-203ENST00000429578 TGP01266 2768 aa12.54□□□□□ -0.4
LINC00887-203ENST00000429578 LEPP41159 167 aa12.54□□□□□ -0.4
LINC00887-203ENST00000429578 NUTF2P61970 127 aaKnown RBP12.54□□□□□ -0.4
LINC00887-203ENST00000429578 SPINK13Q1W4C9 94 aa12.54□□□□□ -0.4
LINC00887-203ENST00000429578 DNAH3Q8TD57 4116 aa12.53□□□□□ -0.4
LINC00887-203ENST00000429578 KLLNB2CW77 178 aa12.53□□□□□ -0.4
LINC00887-203ENST00000429578 M0R2Z0 102 aa12.53□□□□□ -0.4
LINC00887-203ENST00000429578 IGHV4-30-4P0DP06 118 aa12.53□□□□□ -0.4
LINC00887-203ENST00000429578 RPL35AP18077 110 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms