RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 FAM110AQ9BQ89 295 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 NDFIP1Q9BT67 221 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 DERL1Q9BUN8 251 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 SRD5A3Q9H8P0 318 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 HLA-DRB4X5D2U9 266 aa5.87□□□□□ -1.47
HMGA1P4-201ENST00000428643 RBAKDNA6NC62 111 aa5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 C9JQL5 133 aa5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 H3BMM0 161 aa5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 RPL35AP18077 110 aaKnown RBP5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 RPL35P42766 123 aaKnown RBP5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 ZNF138P52744 262 aa5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 FLI1Q01543 452 aaPredicted RBP5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 CENPWQ5EE01 88 aa5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 PRNTQ86SH4 94 aa5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 TMEM75Q8N9X5 138 aa5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 CITED4Q96RK1 184 aa5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 ASCL2Q99929 193 aa5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 AGPAT4-IT1Q9H0P7 198 aa5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 SLC35B3Q9H1N7 401 aa5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 SMDT1Q9H4I9 107 aa5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 TUBA4BQ9H853 241 aa5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 C19orf73Q9NVV2 129 aa5.86□□□□□ -1.47
HMGA1P4-201ENST00000428643 PKD1L1Q8TDX9 2849 aa5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 FBLL1A6NHQ2 334 aaKnown RBP5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 IGLV2-11P01706 119 aa5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 PRB2P02812 416 aaPredicted RBP5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 S100A9P06702 114 aaKnown RBP5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 LEPP41159 167 aa5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 GNG4P50150 75 aa5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 NDUFA5Q16718 116 aa5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 TMEM183BQ1AE95 376 aa5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 SOHLH1Q5JUK2 328 aa5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 KPRPQ5T749 579 aaPredicted RBP5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 C9orf47Q6ZRZ4 202 aa5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 NHLRC2Q8NBF2 726 aa5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 SMIM7Q9BQ49 75 aa5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 PARLQ9H300 379 aa5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 ZNF492Q9P255 531 aa5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 PSG8Q9UQ74 426 aa5.85□□□□□ -1.47
HMGA1P4-201ENST00000428643 RBMY1BA6NDE4 496 aaKnown RBP5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 RBMY1EA6NEQ0 496 aaKnown RBP5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 ZNF727A8MUV8 499 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 J3KRW8 73 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 NDUFS6O75380 124 aaKnown RBP5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 LTAP01374 205 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 RBMY1DP0C7P1 496 aaKnown RBP5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 CT45A10P0DMU9 189 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 IGHV4-30-4P0DP06 118 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 TSPOP30536 169 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 FXYD7P58549 80 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 SPINK13Q1W4C9 94 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 TRPT1Q86TN4 253 aaKnown RBP5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 BAGE2Q86Y30 109 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 SLC7A5P1Q8MH63 180 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 Q8N1Y9 231 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 EIF4E3Q8N5X7 224 aaKnown RBP5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 IGF2BP2-AS1Q96M15 143 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 LINC00477Q96M19 166 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 ODF3Q96PU9 254 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 KLF12Q9Y4X4 402 aa5.84□□□□□ -1.47
HMGA1P4-201ENST00000428643 MEGF8Q7Z7M0 2845 aa5.84□□□□□ -1.48
HMGA1P4-201ENST00000428643 TRBV20OR9-2A0A075B6H5 130 aa5.83□□□□□ -1.48
HMGA1P4-201ENST00000428643 TRBV6-1A0A0K0K1D8 114 aa5.83□□□□□ -1.48
HMGA1P4-201ENST00000428643 TMEM218A2RU14 115 aa5.83□□□□□ -1.48
HMGA1P4-201ENST00000428643 M0R2Z0 102 aa5.83□□□□□ -1.48
HMGA1P4-201ENST00000428643 MGST1P10620 155 aaKnown RBP5.83□□□□□ -1.48
HMGA1P4-201ENST00000428643 TAS2R60P59551 318 aa5.83□□□□□ -1.48
HMGA1P4-201ENST00000428643 NUTF2P61970 127 aaKnown RBP5.83□□□□□ -1.48
HMGA1P4-201ENST00000428643 FAM74A3Q4VXF1 159 aa5.83□□□□□ -1.48
HMGA1P4-201ENST00000428643 SAPCD1Q5SSQ6 148 aa5.83□□□□□ -1.48
HMGA1P4-201ENST00000428643 AMTNQ6UX39 209 aa5.83□□□□□ -1.48
HMGA1P4-201ENST00000428643 C8orf49Q96NF6 230 aa5.83□□□□□ -1.48
HMGA1P4-201ENST00000428643 NIPSNAP3BQ9BS92 247 aa5.83□□□□□ -1.48
HMGA1P4-201ENST00000428643 AURKAIP1Q9NWT8 199 aaPredicted RBP5.83□□□□□ -1.48
HMGA1P4-201ENST00000428643 ZFP30Q9Y2G7 519 aa5.83□□□□□ -1.48
HMGA1P4-201ENST00000428643 NOTCH1P46531 2555 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 TRAV12-2A0A075B6T6 113 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 LOC102724200A0A096LPH7 203 aaPredicted RBP5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 TRBV7-9A0A0J9YWB2 115 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 PGPEP1LA6NFU8 196 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 A8MTW9 85 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 C9JCJ5 164 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 F8W036 122 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 CA1P00915 261 aaPredicted RBP5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 INSP01308 110 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 AMBPP02760 352 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 GPX1P07203 203 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 RNASE4P34096 147 aaKnown RBP5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 CDKN1BP46527 198 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 APOC4P55056 127 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 BTN1A1Q13410 526 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 SMUG1Q53HV7 270 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 PRR27Q6MZM9 219 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 MORN3Q6PF18 240 aaPredicted RBP5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 ZFAND2AQ8N6M9 145 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 TVP23CQ96ET8 276 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 CLUHP3Q96NS8 147 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 XCL2Q9UBD3 114 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 LENEPQ9Y5L5 61 aa5.82□□□□□ -1.48
HMGA1P4-201ENST00000428643 CMYA5Q8N3K9 4069 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms