RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 TAS2R60P59551 318 aa13.55□□□□□ -0.24
COL9A2-204ENST00000427563 TMEM256Q8N2U0 113 aa13.55□□□□□ -0.24
COL9A2-204ENST00000427563 BLNKQ8WV28 456 aa13.55□□□□□ -0.24
COL9A2-204ENST00000427563 FXYD5Q96DB9 178 aa13.55□□□□□ -0.24
COL9A2-204ENST00000427563 MRPL53Q96EL3 112 aaKnown RBP13.55□□□□□ -0.24
COL9A2-204ENST00000427563 HTN3P15516 51 aa13.54□□□□□ -0.24
COL9A2-204ENST00000427563 DAD1P61803 113 aa13.54□□□□□ -0.24
COL9A2-204ENST00000427563 PDE6HQ13956 83 aa13.54□□□□□ -0.24
COL9A2-204ENST00000427563 RNASE8Q8TDE3 154 aaKnown RBP13.54□□□□□ -0.24
COL9A2-204ENST00000427563 FAM19A4Q96LR4 140 aa13.54□□□□□ -0.24
COL9A2-204ENST00000427563 ODF3Q96PU9 254 aa13.54□□□□□ -0.24
COL9A2-204ENST00000427563 NDUFAF3Q9BU61 184 aa13.54□□□□□ -0.24
COL9A2-204ENST00000427563 LYRM9A8MSI8 78 aa13.53□□□□□ -0.24
COL9A2-204ENST00000427563 J3KRW8 73 aa13.53□□□□□ -0.24
COL9A2-204ENST00000427563 EIF3GO75821 320 aaKnown RBP eCLIP13.53□□□□□ -0.24
COL9A2-204ENST00000427563 SERF2P84101 59 aa13.53□□□□□ -0.24
COL9A2-204ENST00000427563 STOML3Q8TAV4 291 aa13.53□□□□□ -0.24
COL9A2-204ENST00000427563 MRPL32Q9BYC8 188 aaKnown RBP13.53□□□□□ -0.24
COL9A2-204ENST00000427563 OR51M1Q9H341 326 aa13.53□□□□□ -0.24
COL9A2-204ENST00000427563 FUT9Q9Y231 359 aa13.53□□□□□ -0.24
COL9A2-204ENST00000427563 FAT2Q9NYQ8 4349 aa13.52□□□□□ -0.24
COL9A2-204ENST00000427563 OR10J4P0C629 311 aa13.52□□□□□ -0.25
COL9A2-204ENST00000427563 HTN1P15515 57 aa13.52□□□□□ -0.25
COL9A2-204ENST00000427563 M6PRP20645 277 aa13.52□□□□□ -0.25
COL9A2-204ENST00000427563 RAB2AP61019 212 aa13.52□□□□□ -0.25
COL9A2-204ENST00000427563 EIF5AP63241 154 aaKnown RBP13.52□□□□□ -0.25
COL9A2-204ENST00000427563 ACOT6Q3I5F7 207 aaPredicted RBP13.52□□□□□ -0.25
COL9A2-204ENST00000427563 PHYHIPLQ96FC7 376 aa13.52□□□□□ -0.25
COL9A2-204ENST00000427563 C20orf144Q9BQM9 153 aa13.52□□□□□ -0.25
COL9A2-204ENST00000427563 AGPAT4-IT1Q9H0P7 198 aa13.52□□□□□ -0.25
COL9A2-204ENST00000427563 NACAE9PAV3 2078 aa13.51□□□□□ -0.25
COL9A2-204ENST00000427563 H7BYZ3 331 aa13.51□□□□□ -0.25
COL9A2-204ENST00000427563 NBEAP1P0C6P0 100 aa13.51□□□□□ -0.25
COL9A2-204ENST00000427563 TPT1P13693 172 aaKnown RBP13.51□□□□□ -0.25
COL9A2-204ENST00000427563 ICAM4Q14773 271 aa13.51□□□□□ -0.25
COL9A2-204ENST00000427563 TMEM88Q6PEY1 159 aa13.51□□□□□ -0.25
COL9A2-204ENST00000427563 PAXXQ9BUH6 204 aa13.51□□□□□ -0.25
COL9A2-204ENST00000427563 PRELID1Q9Y255 219 aa13.51□□□□□ -0.25
COL9A2-204ENST00000427563 DNAH17Q9UFH2 4485 aa13.51□□□□□ -0.25
COL9A2-204ENST00000427563 HECTD4Q9Y4D8 3996 aa13.51□□□□□ -0.25
COL9A2-204ENST00000427563 IGKV2-40A0A087WW87 121 aaPredicted RBP13.5□□□□□ -0.25
COL9A2-204ENST00000427563 IGKV2D-40P01614 121 aaPredicted RBP13.5□□□□□ -0.25
COL9A2-204ENST00000427563 DEFB130BP0DP73 79 aa13.5□□□□□ -0.25
COL9A2-204ENST00000427563 DEFB130AP0DP74 79 aa13.5□□□□□ -0.25
COL9A2-204ENST00000427563 SLC51BQ86UW2 128 aa13.5□□□□□ -0.25
COL9A2-204ENST00000427563 TMEM263Q8WUH6 116 aaKnown RBP13.5□□□□□ -0.25
COL9A2-204ENST00000427563 C16orf74Q96GX8 76 aa13.5□□□□□ -0.25
COL9A2-204ENST00000427563 FAM210BQ96KR6 192 aa13.5□□□□□ -0.25
COL9A2-204ENST00000427563 TRAV12-3A0A0B4J271 114 aa13.49□□□□□ -0.25
COL9A2-204ENST00000427563 KLLNB2CW77 178 aa13.49□□□□□ -0.25
COL9A2-204ENST00000427563 MBP02144 154 aa13.49□□□□□ -0.25
COL9A2-204ENST00000427563 SEC11BP0C7V7 166 aa13.49□□□□□ -0.25
COL9A2-204ENST00000427563 LEPP41159 167 aa13.49□□□□□ -0.25
COL9A2-204ENST00000427563 FAM122CQ6P4D5 195 aa13.49□□□□□ -0.25
COL9A2-204ENST00000427563 OR10G4Q8NGN3 311 aa13.49□□□□□ -0.25
COL9A2-204ENST00000427563 OR10G9Q8NGN4 311 aa13.49□□□□□ -0.25
COL9A2-204ENST00000427563 OR10G7Q8NGN6 311 aa13.49□□□□□ -0.25
COL9A2-204ENST00000427563 RNF141Q8WVD5 230 aa13.49□□□□□ -0.25
COL9A2-204ENST00000427563 VGLL1Q99990 258 aa13.49□□□□□ -0.25
COL9A2-204ENST00000427563 BOLA1Q9Y3E2 137 aa13.49□□□□□ -0.25
COL9A2-204ENST00000427563 BTN1A1Q13410 526 aa13.48□□□□□ -0.25
COL9A2-204ENST00000427563 PRR9Q5T870 116 aa13.48□□□□□ -0.25
COL9A2-204ENST00000427563 Q6ZQT7 251 aa13.48□□□□□ -0.25
COL9A2-204ENST00000427563 C9orf47Q6ZRZ4 202 aa13.48□□□□□ -0.25
COL9A2-204ENST00000427563 POM121L12Q8N7R1 296 aa13.48□□□□□ -0.25
COL9A2-204ENST00000427563 NOP10Q9NPE3 64 aaKnown RBP13.48□□□□□ -0.25
COL9A2-204ENST00000427563 ZNF324O75467 553 aaPredicted RBP13.47□□□□□ -0.25
COL9A2-204ENST00000427563 P0DMU3 169 aa13.47□□□□□ -0.25
COL9A2-204ENST00000427563 FAM231AP0DMU4 169 aa13.47□□□□□ -0.25
COL9A2-204ENST00000427563 FAM231CP0DMU5 169 aa13.47□□□□□ -0.25
COL9A2-204ENST00000427563 AKR1C8PQ5T2L2 129 aa13.47□□□□□ -0.25
COL9A2-204ENST00000427563 ZNF493Q6ZR52 646 aa13.47□□□□□ -0.25
COL9A2-204ENST00000427563 ZFAND2AQ8N6M9 145 aa13.47□□□□□ -0.25
COL9A2-204ENST00000427563 LINC00612Q8N6U2 182 aa13.47□□□□□ -0.25
COL9A2-204ENST00000427563 LINC00477Q96M19 166 aa13.47□□□□□ -0.25
COL9A2-204ENST00000427563 TIMM8BQ9Y5J9 83 aaPredicted RBP13.47□□□□□ -0.25
COL9A2-204ENST00000427563 A0A1W2PPV4 95 aa13.46□□□□□ -0.25
COL9A2-204ENST00000427563 C7orf71A4D174 169 aa13.46□□□□□ -0.25
COL9A2-204ENST00000427563 OR7C2O60412 319 aa13.46□□□□□ -0.25
COL9A2-204ENST00000427563 CRISP2P16562 243 aa13.46□□□□□ -0.25
COL9A2-204ENST00000427563 CDC34P49427 236 aaPredicted RBP13.46□□□□□ -0.25
COL9A2-204ENST00000427563 TMED6Q8WW62 240 aa13.46□□□□□ -0.25
COL9A2-204ENST00000427563 AAMDCQ9H7C9 122 aa13.46□□□□□ -0.25
COL9A2-204ENST00000427563 SLC25A5P05141 298 aaKnown RBP13.45□□□□□ -0.26
COL9A2-204ENST00000427563 TAS2R45P59539 299 aa13.45□□□□□ -0.26
COL9A2-204ENST00000427563 Q9H3A6 140 aa13.45□□□□□ -0.26
COL9A2-204ENST00000427563 CBY3A6NI87 242 aa13.44□□□□□ -0.26
COL9A2-204ENST00000427563 RANP62826 216 aaKnown RBP13.44□□□□□ -0.26
COL9A2-204ENST00000427563 UBE2L3P68036 154 aaKnown RBP13.44□□□□□ -0.26
COL9A2-204ENST00000427563 KHDC3LQ587J8 217 aa13.44□□□□□ -0.26
COL9A2-204ENST00000427563 C11orf72Q8NBR9 251 aa13.44□□□□□ -0.26
COL9A2-204ENST00000427563 Q8TAT8 98 aa13.44□□□□□ -0.26
COL9A2-204ENST00000427563 RAB24Q969Q5 203 aa13.44□□□□□ -0.26
COL9A2-204ENST00000427563 PYGO2Q9BRQ0 406 aa13.44□□□□□ -0.26
COL9A2-204ENST00000427563 ACTR3CQ9C0K3 210 aaPredicted RBP13.44□□□□□ -0.26
COL9A2-204ENST00000427563 ZNF492Q9P255 531 aa13.44□□□□□ -0.26
COL9A2-204ENST00000427563 UMAD1C9J7I0 102 aa13.43□□□□□ -0.26
COL9A2-204ENST00000427563 F5H768 121 aa13.43□□□□□ -0.26
COL9A2-204ENST00000427563 ZNF726P1Q15940 193 aa13.43□□□□□ -0.26
COL9A2-204ENST00000427563 EIF5AL1Q6IS14 154 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms