RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 C20orf144Q9BQM9 153 aa12.91□□□□□ -0.34
HERC3-205ENST00000426683 ACTR3CQ9C0K3 210 aaPredicted RBP12.91□□□□□ -0.34
HERC3-205ENST00000426683 YTHDF2Q9Y5A9 579 aaKnown RBP12.91□□□□□ -0.34
HERC3-205ENST00000426683 RYR2Q92736 4967 aa12.9□□□□□ -0.34
HERC3-205ENST00000426683 C11orf94C9JXX5 98 aa12.9□□□□□ -0.34
HERC3-205ENST00000426683 HTN1P15515 57 aa12.9□□□□□ -0.34
HERC3-205ENST00000426683 AZU1P20160 251 aa12.9□□□□□ -0.34
HERC3-205ENST00000426683 TMEM78Q5T7P6 136 aa12.9□□□□□ -0.34
HERC3-205ENST00000426683 FAM222AQ5U5X8 452 aa12.9□□□□□ -0.34
HERC3-205ENST00000426683 Q6ZNX1 250 aa12.9□□□□□ -0.34
HERC3-205ENST00000426683 HYLS1Q96M11 299 aa12.9□□□□□ -0.34
HERC3-205ENST00000426683 OTORQ9NRC9 128 aa12.9□□□□□ -0.34
HERC3-205ENST00000426683 DKK2Q9UBU2 259 aa12.9□□□□□ -0.34
HERC3-205ENST00000426683 TRAV10A0A0B4J240 114 aa12.89□□□□□ -0.35
HERC3-205ENST00000426683 PGPA6NDG6 321 aa12.89□□□□□ -0.35
HERC3-205ENST00000426683 H7BYZ3 331 aa12.89□□□□□ -0.35
HERC3-205ENST00000426683 FAM74A1Q5RGS3 127 aa12.89□□□□□ -0.35
HERC3-205ENST00000426683 RXFP4Q8TDU9 374 aa12.89□□□□□ -0.35
HERC3-205ENST00000426683 C2CD4CQ8TF44 421 aa12.89□□□□□ -0.35
HERC3-205ENST00000426683 FAM19A4Q96LR4 140 aa12.89□□□□□ -0.35
HERC3-205ENST00000426683 TRAV12-3A0A0B4J271 114 aa12.88□□□□□ -0.35
HERC3-205ENST00000426683 TEX48A0A1B0GUV7 120 aa12.88□□□□□ -0.35
HERC3-205ENST00000426683 DIRC3C9JPN6 131 aa12.88□□□□□ -0.35
HERC3-205ENST00000426683 SLC25A5P05141 298 aaKnown RBP12.88□□□□□ -0.35
HERC3-205ENST00000426683 GCHFRP30047 84 aa12.88□□□□□ -0.35
HERC3-205ENST00000426683 AKR1C8PQ5T2L2 129 aa12.88□□□□□ -0.35
HERC3-205ENST00000426683 SSX7Q7RTT5 188 aa12.88□□□□□ -0.35
HERC3-205ENST00000426683 CMTM2Q8TAZ6 248 aa12.88□□□□□ -0.35
HERC3-205ENST00000426683 ZNF492Q9P255 531 aa12.88□□□□□ -0.35
HERC3-205ENST00000426683 A0A0D9SG52 128 aa12.87□□□□□ -0.35
HERC3-205ENST00000426683 C7orf71A4D174 169 aa12.87□□□□□ -0.35
HERC3-205ENST00000426683 RBAKDNA6NC62 111 aa12.87□□□□□ -0.35
HERC3-205ENST00000426683 KLLNB2CW77 178 aa12.87□□□□□ -0.35
HERC3-205ENST00000426683 CXorf1O96002 111 aa12.87□□□□□ -0.35
HERC3-205ENST00000426683 CRISP2P16562 243 aa12.87□□□□□ -0.35
HERC3-205ENST00000426683 ZNF138P52744 262 aa12.87□□□□□ -0.35
HERC3-205ENST00000426683 ZNF726P1Q15940 193 aa12.87□□□□□ -0.35
HERC3-205ENST00000426683 Q8TAT8 98 aa12.87□□□□□ -0.35
HERC3-205ENST00000426683 ST6GAL2Q96JF0 529 aa12.87□□□□□ -0.35
HERC3-205ENST00000426683 NIPSNAP3BQ9BS92 247 aa12.87□□□□□ -0.35
HERC3-205ENST00000426683 PLA2G2EQ9NZK7 142 aa12.87□□□□□ -0.35
HERC3-205ENST00000426683 RPH3ALQ9UNE2 315 aa12.87□□□□□ -0.35
HERC3-205ENST00000426683 DEFB131BA0A096LNP1 70 aa12.86□□□□□ -0.35
HERC3-205ENST00000426683 KANTRA0A1W2PQU2 76 aa12.86□□□□□ -0.35
HERC3-205ENST00000426683 CD300CQ08708 224 aa12.86□□□□□ -0.35
HERC3-205ENST00000426683 BTN1A1Q13410 526 aa12.86□□□□□ -0.35
HERC3-205ENST00000426683 IQCF2Q8IXL9 164 aa12.86□□□□□ -0.35
HERC3-205ENST00000426683 SUN5Q8TC36 379 aa12.86□□□□□ -0.35
HERC3-205ENST00000426683 C16orf74Q96GX8 76 aa12.86□□□□□ -0.35
HERC3-205ENST00000426683 TMEM167BQ9NRX6 74 aa12.86□□□□□ -0.35
HERC3-205ENST00000426683 ALMS1Q8TCU4 4167 aa12.85□□□□□ -0.35
HERC3-205ENST00000426683 CTXND1A0A1B0GTU2 59 aa12.85□□□□□ -0.35
HERC3-205ENST00000426683 PLAC8L1A1L4L8 177 aa12.85□□□□□ -0.35
HERC3-205ENST00000426683 IGLL5B9A064 214 aa12.85□□□□□ -0.35
HERC3-205ENST00000426683 BCL2L11O43521 198 aa12.85□□□□□ -0.35
HERC3-205ENST00000426683 GPX1P07203 203 aa12.85□□□□□ -0.35
HERC3-205ENST00000426683 NMBP08949 121 aa12.85□□□□□ -0.35
HERC3-205ENST00000426683 RNASE4P34096 147 aaKnown RBP12.85□□□□□ -0.35
HERC3-205ENST00000426683 CCDC28AQ8IWP9 274 aa12.85□□□□□ -0.35
HERC3-205ENST00000426683 ZFAND2AQ8N6M9 145 aa12.85□□□□□ -0.35
HERC3-205ENST00000426683 ZNF471Q9BX82 626 aaPredicted RBP12.85□□□□□ -0.35
HERC3-205ENST00000426683 TENM2Q9NT68 2774 aa12.85□□□□□ -0.35
HERC3-205ENST00000426683 GNG5P63218 68 aa12.84□□□□□ -0.35
HERC3-205ENST00000426683 PRR9Q5T870 116 aa12.84□□□□□ -0.35
HERC3-205ENST00000426683 ZNF493Q6ZR52 646 aa12.84□□□□□ -0.35
HERC3-205ENST00000426683 TCTE3Q8IZS6 198 aa12.84□□□□□ -0.35
HERC3-205ENST00000426683 RNASE8Q8TDE3 154 aaKnown RBP12.84□□□□□ -0.35
HERC3-205ENST00000426683 TMEM263Q8WUH6 116 aaKnown RBP12.84□□□□□ -0.35
HERC3-205ENST00000426683 LYSTQ99698 3801 aa12.84□□□□□ -0.35
HERC3-205ENST00000426683 PYGO2Q9BRQ0 406 aa12.84□□□□□ -0.35
HERC3-205ENST00000426683 hCG_2014768A0A024R1R8 64 aa12.83□□□□□ -0.36
HERC3-205ENST00000426683 TRBV7-9A0A0J9YWB2 115 aa12.83□□□□□ -0.36
HERC3-205ENST00000426683 LYRM9A8MSI8 78 aa12.83□□□□□ -0.36
HERC3-205ENST00000426683 PFDN1O60925 122 aa12.83□□□□□ -0.36
HERC3-205ENST00000426683 ZNF324O75467 553 aaPredicted RBP12.83□□□□□ -0.36
HERC3-205ENST00000426683 DAD1P61803 113 aa12.83□□□□□ -0.36
HERC3-205ENST00000426683 GOLT1AQ6ZVE7 132 aa12.83□□□□□ -0.36
HERC3-205ENST00000426683 TMUB2Q71RG4 321 aa12.83□□□□□ -0.36
HERC3-205ENST00000426683 ARL6IP6Q8N6S5 226 aa12.83□□□□□ -0.36
HERC3-205ENST00000426683 LINC00476Q8WZB0 136 aa12.83□□□□□ -0.36
HERC3-205ENST00000426683 DNAH1Q9P2D7 4330 aa12.83□□□□□ -0.36
HERC3-205ENST00000426683 FGF8P55075 233 aaPredicted RBP12.82□□□□□ -0.36
HERC3-205ENST00000426683 TIMM8BQ9Y5J9 83 aaPredicted RBP12.82□□□□□ -0.36
HERC3-205ENST00000426683 IGHV4-4A0A075B6R2 117 aa12.81□□□□□ -0.36
HERC3-205ENST00000426683 LY6G6CO95867 125 aa12.81□□□□□ -0.36
HERC3-205ENST00000426683 SEC11BP0C7V7 166 aa12.81□□□□□ -0.36
HERC3-205ENST00000426683 DEFB130BP0DP73 79 aa12.81□□□□□ -0.36
HERC3-205ENST00000426683 DEFB130AP0DP74 79 aa12.81□□□□□ -0.36
HERC3-205ENST00000426683 TCTAP57738 103 aa12.81□□□□□ -0.36
HERC3-205ENST00000426683 SUMO1P63165 101 aaKnown RBP12.81□□□□□ -0.36
HERC3-205ENST00000426683 C5orf17Q8NAS9 161 aa12.81□□□□□ -0.36
HERC3-205ENST00000426683 TMED6Q8WW62 240 aa12.81□□□□□ -0.36
HERC3-205ENST00000426683 TMPRSS5Q9H3S3 457 aa12.81□□□□□ -0.36
HERC3-205ENST00000426683 NOP10Q9NPE3 64 aaKnown RBP12.81□□□□□ -0.36
HERC3-205ENST00000426683 APLNQ9ULZ1 77 aa12.81□□□□□ -0.36
HERC3-205ENST00000426683 MAP1LC3B2A6NCE7 125 aa12.8□□□□□ -0.36
HERC3-205ENST00000426683 GGTLC3B5MD39 225 aa12.8□□□□□ -0.36
HERC3-205ENST00000426683 HTN3P15516 51 aa12.8□□□□□ -0.36
HERC3-205ENST00000426683 EIF5AP63241 154 aaKnown RBP12.8□□□□□ -0.36
HERC3-205ENST00000426683 Q6ZQT7 251 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms