RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 PSG3Q16557 428 aa10.49□□□□□ -0.73
USP42-203ENST00000426246 ANKRD39Q53RE8 183 aa10.49□□□□□ -0.73
USP42-203ENST00000426246 VMO1Q7Z5L0 202 aa10.49□□□□□ -0.73
USP42-203ENST00000426246 PCP2Q8IVA1 136 aa10.49□□□□□ -0.73
USP42-203ENST00000426246 NDFIP1Q9BT67 221 aa10.49□□□□□ -0.73
USP42-203ENST00000426246 DKK2Q9UBU2 259 aa10.49□□□□□ -0.73
USP42-203ENST00000426246 CSMD2Q7Z408 3487 aa10.49□□□□□ -0.73
USP42-203ENST00000426246 NPYP01303 97 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 CRIP1P50238 77 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 SPANXN1Q5VSR9 72 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 FAM71F2Q6NXP2 309 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 FER1L6-AS1Q8NA97 138 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 ZNF414Q96IQ9 312 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 ZFHX3Q15911 3703 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 GAGE10A6NGK3 116 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 EMP1P54849 157 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 ATP5IP56385 69 aaPredicted RBP10.48□□□□□ -0.73
USP42-203ENST00000426246 RHOGP84095 191 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 C11orf71Q6IPW1 123 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 GTSCR1Q86UQ5 136 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 RABAC1Q9UI14 185 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 UBR5O95071 2799 aaPredicted RBP10.48□□□□□ -0.73
USP42-203ENST00000426246 I3L2K1 104 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 ESDP10768 282 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 EGR2P11161 476 aaPredicted RBP10.48□□□□□ -0.73
USP42-203ENST00000426246 UBE2V1Q13404 147 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 FAM231DQ6ZW35 169 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 SIGLEC8Q9NYZ4 499 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 HIVEP2P31629 2446 aa10.48□□□□□ -0.73
USP42-203ENST00000426246 IGLV1-47P01700 117 aa10.47□□□□□ -0.73
USP42-203ENST00000426246 LEPP41159 167 aa10.47□□□□□ -0.73
USP42-203ENST00000426246 C5orf64Q2M2E5 130 aa10.47□□□□□ -0.73
USP42-203ENST00000426246 ORMDL3Q8N138 153 aa10.47□□□□□ -0.73
USP42-203ENST00000426246 FOXC2Q99958 501 aa10.47□□□□□ -0.73
USP42-203ENST00000426246 SHANK2-AS3Q9BTD1 123 aa10.47□□□□□ -0.73
USP42-203ENST00000426246 C1RLQ9NZP8 487 aa10.47□□□□□ -0.73
USP42-203ENST00000426246 ARL6IP6Q8N6S5 226 aa10.47□□□□□ -0.73
USP42-203ENST00000426246 ZNF80P51504 273 aaPredicted RBP10.47□□□□□ -0.73
USP42-203ENST00000426246 SIGLEC15Q6ZMC9 328 aa10.47□□□□□ -0.73
USP42-203ENST00000426246 IL17RELQ6ZVW7 336 aa10.47□□□□□ -0.73
USP42-203ENST00000426246 KAAG1Q9UBP8 84 aa10.47□□□□□ -0.73
USP42-203ENST00000426246 NDUFA3O95167 84 aa10.46□□□□□ -0.73
USP42-203ENST00000426246 CHODLQ9H9P2 273 aa10.46□□□□□ -0.73
USP42-203ENST00000426246 CELSR2Q9HCU4 2923 aa10.46□□□□□ -0.73
USP42-203ENST00000426246 C19orf84I3L1E1 186 aa10.46□□□□□ -0.73
USP42-203ENST00000426246 PSG9Q00887 426 aa10.46□□□□□ -0.73
USP42-203ENST00000426246 FAM162BQ5T6X4 162 aa10.46□□□□□ -0.73
USP42-203ENST00000426246 NEU4Q8WWR8 484 aaPredicted RBP10.46□□□□□ -0.73
USP42-203ENST00000426246 MLST8Q9BVC4 326 aa10.46□□□□□ -0.73
USP42-203ENST00000426246 MRPL51Q4U2R6 128 aaKnown RBP10.46□□□□□ -0.74
USP42-203ENST00000426246 ATP5L2Q7Z4Y8 100 aa10.46□□□□□ -0.74
USP42-203ENST00000426246 WIPF2Q8TF74 440 aaPredicted RBP10.45□□□□□ -0.74
USP42-203ENST00000426246 SOX21Q9Y651 276 aaPredicted RBP10.45□□□□□ -0.74
USP42-203ENST00000426246 FSTL3O95633 263 aa10.45□□□□□ -0.74
USP42-203ENST00000426246 TGFAP01135 160 aa10.45□□□□□ -0.74
USP42-203ENST00000426246 DLX6P56179 175 aa10.45□□□□□ -0.74
USP42-203ENST00000426246 MRGPRG-AS1Q2M3A8 158 aa10.45□□□□□ -0.74
USP42-203ENST00000426246 C12orf54Q6X4T0 127 aa10.45□□□□□ -0.74
USP42-203ENST00000426246 C16orf92Q96LL3 132 aa10.45□□□□□ -0.74
USP42-203ENST00000426246 F5H697 171 aa10.45□□□□□ -0.74
USP42-203ENST00000426246 H3BVH4 76 aa10.45□□□□□ -0.74
USP42-203ENST00000426246 K7ERJ3 54 aa10.45□□□□□ -0.74
USP42-203ENST00000426246 RPL7P18124 248 aaKnown RBP10.45□□□□□ -0.74
USP42-203ENST00000426246 NEGR1Q7Z3B1 354 aa10.45□□□□□ -0.74
USP42-203ENST00000426246 AGRNO00468 2067 aa10.45□□□□□ -0.74
USP42-203ENST00000426246 ZNF462Q96JM2 2506 aa10.44□□□□□ -0.74
USP42-203ENST00000426246 A0A1B0GXF2 115 aa10.44□□□□□ -0.74
USP42-203ENST00000426246 C19orf71A6NCJ1 209 aa10.44□□□□□ -0.74
USP42-203ENST00000426246 BVES-AS1Q5T3Y7 98 aa10.44□□□□□ -0.74
USP42-203ENST00000426246 IFI27L1Q96BM0 104 aa10.44□□□□□ -0.74
USP42-203ENST00000426246 F6UB75 175 aa10.44□□□□□ -0.74
USP42-203ENST00000426246 SAP30O75446 220 aa10.44□□□□□ -0.74
USP42-203ENST00000426246 SMIM15Q7Z3B0 74 aa10.44□□□□□ -0.74
USP42-203ENST00000426246 SPOCK3Q9BQ16 436 aa10.44□□□□□ -0.74
USP42-203ENST00000426246 FAM231BA6NCW3 169 aa10.43□□□□□ -0.74
USP42-203ENST00000426246 ATP6V0E1O15342 81 aa10.43□□□□□ -0.74
USP42-203ENST00000426246 IGLV2-11P01706 119 aa10.43□□□□□ -0.74
USP42-203ENST00000426246 ZFP36P26651 326 aaKnown RBP10.43□□□□□ -0.74
USP42-203ENST00000426246 TMEM30BQ3MIR4 351 aa10.43□□□□□ -0.74
USP42-203ENST00000426246 MAPK1IP1LQ8NDC0 245 aa10.43□□□□□ -0.74
USP42-203ENST00000426246 PF4V1P10720 104 aa10.43□□□□□ -0.74
USP42-203ENST00000426246 EFNA4P52798 201 aa10.43□□□□□ -0.74
USP42-203ENST00000426246 ZNF747Q9BV97 191 aa10.43□□□□□ -0.74
USP42-203ENST00000426246 C7orf69Q9H7B7 122 aa10.43□□□□□ -0.74
USP42-203ENST00000426246 MYCNOSP40205 109 aa10.43□□□□□ -0.74
USP42-203ENST00000426246 TMEM97Q5BJF2 176 aa10.43□□□□□ -0.74
USP42-203ENST00000426246 TMEM78Q5T7P6 136 aa10.43□□□□□ -0.74
USP42-203ENST00000426246 DTX2Q86UW9 622 aa10.43□□□□□ -0.74
USP42-203ENST00000426246 CHCHD1Q96BP2 118 aaKnown RBP10.43□□□□□ -0.74
USP42-203ENST00000426246 BPESC1Q9GZL8 116 aa10.43□□□□□ -0.74
USP42-203ENST00000426246 A1L4Q6 167 aa10.42□□□□□ -0.74
USP42-203ENST00000426246 FAM74A4Q5TZK3 123 aa10.42□□□□□ -0.74
USP42-203ENST00000426246 NHP2Q9NX24 153 aaKnown RBP10.42□□□□□ -0.74
USP42-203ENST00000426246 MRPS16Q9Y3D3 137 aaKnown RBP10.42□□□□□ -0.74
USP42-203ENST00000426246 PRRC2AP48634 2157 aaKnown RBP10.42□□□□□ -0.74
USP42-203ENST00000426246 CRYGCP07315 174 aa10.42□□□□□ -0.74
USP42-203ENST00000426246 LINC00311Q8N616 119 aa10.42□□□□□ -0.74
USP42-203ENST00000426246 BBC3Q96PG8 261 aaPredicted RBP10.42□□□□□ -0.74
USP42-203ENST00000426246 PRR25Q96S07 402 aa10.42□□□□□ -0.74
USP42-203ENST00000426246 PRSS22Q9GZN4 317 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms