RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 AGPAT4-IT1Q9H0P7 198 aa12.86□□□□□ -0.35
LINC00271-201ENST00000421378 PRKDCP78527 4128 aaKnown RBP12.86□□□□□ -0.35
LINC00271-201ENST00000421378 BCL2P10415 239 aa12.86□□□□□ -0.35
LINC00271-201ENST00000421378 IFITM2Q01629 132 aa12.86□□□□□ -0.35
LINC00271-201ENST00000421378 CYB561D1Q8N8Q1 229 aa12.86□□□□□ -0.35
LINC00271-201ENST00000421378 HIST1H2BAQ96A08 127 aa12.86□□□□□ -0.35
LINC00271-201ENST00000421378 PEX7O00628 323 aa12.85□□□□□ -0.35
LINC00271-201ENST00000421378 UBE2CO00762 179 aa12.85□□□□□ -0.35
LINC00271-201ENST00000421378 CT45A10P0DMU9 189 aa12.85□□□□□ -0.35
LINC00271-201ENST00000421378 TAGLN2P37802 199 aaKnown RBP12.85□□□□□ -0.35
LINC00271-201ENST00000421378 FXYD7P58549 80 aa12.85□□□□□ -0.35
LINC00271-201ENST00000421378 SPINK13Q1W4C9 94 aa12.85□□□□□ -0.35
LINC00271-201ENST00000421378 ODF3Q96PU9 254 aa12.85□□□□□ -0.35
LINC00271-201ENST00000421378 TXNDC17Q9BRA2 123 aa12.85□□□□□ -0.35
LINC00271-201ENST00000421378 C1QTNF4Q9BXJ3 329 aa12.85□□□□□ -0.35
LINC00271-201ENST00000421378 TRAV8-1A0A0A6YYK1 113 aa12.84□□□□□ -0.35
LINC00271-201ENST00000421378 F6UZH7 168 aa12.84□□□□□ -0.35
LINC00271-201ENST00000421378 M0R2Z0 102 aa12.84□□□□□ -0.35
LINC00271-201ENST00000421378 GIG44P09565 113 aaPredicted RBP12.84□□□□□ -0.35
LINC00271-201ENST00000421378 RAB14P61106 215 aa12.84□□□□□ -0.35
LINC00271-201ENST00000421378 MEF2BQ02080 365 aaPredicted RBP12.84□□□□□ -0.35
LINC00271-201ENST00000421378 Q8TAT8 98 aa12.84□□□□□ -0.35
LINC00271-201ENST00000421378 ASCL2Q99929 193 aa12.84□□□□□ -0.35
LINC00271-201ENST00000421378 CDKN1BP46527 198 aa12.83□□□□□ -0.36
LINC00271-201ENST00000421378 ZNF138P52744 262 aa12.83□□□□□ -0.36
LINC00271-201ENST00000421378 Q6ZWC4 215 aa12.83□□□□□ -0.36
LINC00271-201ENST00000421378 ZNF492Q9P255 531 aa12.83□□□□□ -0.36
LINC00271-201ENST00000421378 XCL2Q9UBD3 114 aa12.83□□□□□ -0.36
LINC00271-201ENST00000421378 VAX2Q9UIW0 290 aa12.83□□□□□ -0.36
LINC00271-201ENST00000421378 TSPOP30536 169 aa12.82□□□□□ -0.36
LINC00271-201ENST00000421378 DEFB135Q30KP9 77 aa12.82□□□□□ -0.36
LINC00271-201ENST00000421378 TMEM75Q8N9X5 138 aa12.82□□□□□ -0.36
LINC00271-201ENST00000421378 LOC102723971A0A1B0GUV8 181 aa12.81□□□□□ -0.36
LINC00271-201ENST00000421378 SCO2A0A1W2PP80 73 aa12.81□□□□□ -0.36
LINC00271-201ENST00000421378 AMBPP02760 352 aa12.81□□□□□ -0.36
LINC00271-201ENST00000421378 SGK494Q96LW2 274 aa12.81□□□□□ -0.36
LINC00271-201ENST00000421378 TRAV12-2A0A075B6T6 113 aa12.81□□□□□ -0.36
LINC00271-201ENST00000421378 RBFOX3A6NFN3 312 aa12.81□□□□□ -0.36
LINC00271-201ENST00000421378 FBLL1A6NHQ2 334 aaKnown RBP12.81□□□□□ -0.36
LINC00271-201ENST00000421378 PDE6DO43924 150 aa12.81□□□□□ -0.36
LINC00271-201ENST00000421378 LEPP41159 167 aa12.81□□□□□ -0.36
LINC00271-201ENST00000421378 FLI1Q01543 452 aaPredicted RBP12.81□□□□□ -0.36
LINC00271-201ENST00000421378 FAM19A4Q96LR4 140 aa12.81□□□□□ -0.36
LINC00271-201ENST00000421378 LINC00479Q96M42 142 aa12.81□□□□□ -0.36
LINC00271-201ENST00000421378 RARRES2Q99969 163 aa12.81□□□□□ -0.36
LINC00271-201ENST00000421378 TM2D3Q9BRN9 247 aa12.81□□□□□ -0.36
LINC00271-201ENST00000421378 LENEPQ9Y5L5 61 aa12.81□□□□□ -0.36
LINC00271-201ENST00000421378 TRBV7-9A0A0J9YWB2 115 aa12.8□□□□□ -0.36
LINC00271-201ENST00000421378 IGLV2-11P01706 119 aa12.8□□□□□ -0.36
LINC00271-201ENST00000421378 AKR1C3P42330 323 aa12.8□□□□□ -0.36
LINC00271-201ENST00000421378 TOR2AQ5JU69 321 aa12.8□□□□□ -0.36
LINC00271-201ENST00000421378 FAM210AQ96ND0 272 aa12.8□□□□□ -0.36
LINC00271-201ENST00000421378 RCHY1Q96PM5 261 aa12.8□□□□□ -0.36
LINC00271-201ENST00000421378 SPATA25Q9BR10 227 aa12.8□□□□□ -0.36
LINC00271-201ENST00000421378 TRAV34A0A0B4J273 112 aa12.79□□□□□ -0.36
LINC00271-201ENST00000421378 J3KRW8 73 aa12.79□□□□□ -0.36
LINC00271-201ENST00000421378 CRXO43186 299 aaPredicted RBP12.79□□□□□ -0.36
LINC00271-201ENST00000421378 INSP01308 110 aa12.79□□□□□ -0.36
LINC00271-201ENST00000421378 CRISP2P16562 243 aa12.79□□□□□ -0.36
LINC00271-201ENST00000421378 UBE2G1P62253 170 aa12.79□□□□□ -0.36
LINC00271-201ENST00000421378 CSNK1G2-AS1Q8NCQ2 148 aa12.79□□□□□ -0.36
LINC00271-201ENST00000421378 C2CD4CQ8TF44 421 aa12.79□□□□□ -0.36
LINC00271-201ENST00000421378 FMC1Q96HJ9 113 aa12.79□□□□□ -0.36
LINC00271-201ENST00000421378 IGF2BP2-AS1Q96M15 143 aa12.79□□□□□ -0.36
LINC00271-201ENST00000421378 NDFIP1Q9BT67 221 aa12.79□□□□□ -0.36
LINC00271-201ENST00000421378 EIF5A2Q9GZV4 153 aaKnown RBP12.79□□□□□ -0.36
LINC00271-201ENST00000421378 PSG8Q9UQ74 426 aa12.79□□□□□ -0.36
LINC00271-201ENST00000421378 KLLNB2CW77 178 aa12.78□□□□□ -0.36
LINC00271-201ENST00000421378 KIR3DS1Q14943 382 aa12.78□□□□□ -0.36
LINC00271-201ENST00000421378 ZNF506Q5JVG8 444 aa12.78□□□□□ -0.36
LINC00271-201ENST00000421378 CLLU1Q5K131 121 aa12.78□□□□□ -0.36
LINC00271-201ENST00000421378 PRNTQ86SH4 94 aa12.78□□□□□ -0.36
LINC00271-201ENST00000421378 C11orf52Q96A22 123 aa12.78□□□□□ -0.36
LINC00271-201ENST00000421378 RNF183Q96D59 192 aa12.78□□□□□ -0.36
LINC00271-201ENST00000421378 ZMAT4Q9H898 229 aa12.78□□□□□ -0.36
LINC00271-201ENST00000421378 RETNQ9HD89 108 aa12.78□□□□□ -0.36
LINC00271-201ENST00000421378 TP53TG1Q9Y2A0 90 aa12.78□□□□□ -0.36
LINC00271-201ENST00000421378 NBEAL2Q6ZNJ1 2754 aa12.78□□□□□ -0.36
LINC00271-201ENST00000421378 SPRY2O43597 315 aa12.77□□□□□ -0.36
LINC00271-201ENST00000421378 GPX1P07203 203 aa12.77□□□□□ -0.36
LINC00271-201ENST00000421378 TMEM183BQ1AE95 376 aa12.77□□□□□ -0.36
LINC00271-201ENST00000421378 GFI1BQ5VTD9 330 aa12.77□□□□□ -0.36
LINC00271-201ENST00000421378 Q86TA4 180 aa12.77□□□□□ -0.36
LINC00271-201ENST00000421378 ZFAND2AQ8N6M9 145 aa12.77□□□□□ -0.36
LINC00271-201ENST00000421378 KLF12Q9Y4X4 402 aa12.77□□□□□ -0.36
LINC00271-201ENST00000421378 NHLRC4P0CG21 123 aaPredicted RBP12.77□□□□□ -0.37
LINC00271-201ENST00000421378 TREM1Q9NP99 234 aa12.77□□□□□ -0.37
LINC00271-201ENST00000421378 RGS13O14921 159 aa12.76□□□□□ -0.37
LINC00271-201ENST00000421378 SAPCD1Q5SSQ6 148 aa12.76□□□□□ -0.37
LINC00271-201ENST00000421378 TVP23CQ96ET8 276 aa12.76□□□□□ -0.37
LINC00271-201ENST00000421378 OVOL2Q9BRP0 275 aa12.76□□□□□ -0.37
LINC00271-201ENST00000421378 GOLT1BQ9Y3E0 138 aa12.76□□□□□ -0.37
LINC00271-201ENST00000421378 IGHV3OR16-12A0A075B7B8 117 aa12.75□□□□□ -0.37
LINC00271-201ENST00000421378 S100A9P06702 114 aaKnown RBP12.75□□□□□ -0.37
LINC00271-201ENST00000421378 RPL35P42766 123 aaKnown RBP12.75□□□□□ -0.37
LINC00271-201ENST00000421378 BTN1A1Q13410 526 aa12.75□□□□□ -0.37
LINC00271-201ENST00000421378 PRR9Q5T870 116 aa12.75□□□□□ -0.37
LINC00271-201ENST00000421378 ZNF705AQ6ZN79 300 aaPredicted RBP12.75□□□□□ -0.37
LINC00271-201ENST00000421378 TMEM208Q9BTX3 173 aa12.75□□□□□ -0.37
LINC00271-201ENST00000421378 DERL1Q9BUN8 251 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms