RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 WT1-ASQ06250 92 aa8.51□□□□□ -1.05
PTCH1-206ENST00000421141 C1orf147Q96MC9 270 aaPredicted RBP8.51□□□□□ -1.05
PTCH1-206ENST00000421141 FOXI2Q6ZQN5 318 aa8.5□□□□□ -1.05
PTCH1-206ENST00000421141 SLURP1P55000 103 aa8.5□□□□□ -1.05
PTCH1-206ENST00000421141 BLCAPP62952 87 aa8.5□□□□□ -1.05
PTCH1-206ENST00000421141 GUSBP1Q15486 140 aa8.5□□□□□ -1.05
PTCH1-206ENST00000421141 GNB1LQ9BYB4 327 aa8.5□□□□□ -1.05
PTCH1-206ENST00000421141 VSIRQ9H7M9 311 aa8.5□□□□□ -1.05
PTCH1-206ENST00000421141 RPP25LQ8N5L8 163 aaKnown RBP8.5□□□□□ -1.05
PTCH1-206ENST00000421141 ANAPC10Q9UM13 185 aa8.5□□□□□ -1.05
PTCH1-206ENST00000421141 LOC107984156A0A0G2JMH3 177 aa8.5□□□□□ -1.05
PTCH1-206ENST00000421141 ARL17AQ8IVW1 177 aa8.5□□□□□ -1.05
PTCH1-206ENST00000421141 PRO1933Q9H354 126 aa8.5□□□□□ -1.05
PTCH1-206ENST00000421141 CBY1Q9Y3M2 126 aa8.5□□□□□ -1.05
PTCH1-206ENST00000421141 TRAV8-1A0A0A6YYK1 113 aa8.5□□□□□ -1.05
PTCH1-206ENST00000421141 SEC11AP67812 179 aa8.5□□□□□ -1.05
PTCH1-206ENST00000421141 INAFM1C9JVW0 142 aa8.49□□□□□ -1.05
PTCH1-206ENST00000421141 CIDEAO60543 219 aa8.49□□□□□ -1.05
PTCH1-206ENST00000421141 C11orf68Q9H3H3 251 aaKnown RBP8.49□□□□□ -1.05
PTCH1-206ENST00000421141 TMEM256Q8N2U0 113 aa8.49□□□□□ -1.05
PTCH1-206ENST00000421141 SRSF4Q08170 494 aaKnown RBP8.49□□□□□ -1.05
PTCH1-206ENST00000421141 LINC00469Q8N7U9 141 aa8.49□□□□□ -1.05
PTCH1-206ENST00000421141 LIME1Q9H400 295 aa8.49□□□□□ -1.05
PTCH1-206ENST00000421141 INSL3P51460 131 aa8.49□□□□□ -1.05
PTCH1-206ENST00000421141 RASL11AQ6T310 242 aa8.49□□□□□ -1.05
PTCH1-206ENST00000421141 WFDC11Q8NEX6 87 aa8.49□□□□□ -1.05
PTCH1-206ENST00000421141 BCL6BQ8N143 479 aaPredicted RBP8.48□□□□□ -1.05
PTCH1-206ENST00000421141 SSBP4Q9BWG4 385 aaPredicted RBP8.48□□□□□ -1.05
PTCH1-206ENST00000421141 SLC25A2Q9BXI2 301 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 LINC00587B1AMM8 73 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 H3BRN7 92 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 POU2AF1Q16633 256 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 IGHV7-81A0A0B4J1V7 117 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 SMIM6P0DI80 62 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 LINC01559Q495D7 138 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 IGHV1OR15-1A0A075B7D0 117 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 WISP2O76076 250 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 HBDP02042 147 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 TMEM14CQ9P0S9 112 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 A0A087X0M5 115 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 A0A1B0GX30 115 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 KNCNA6PVL3 124 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 LYZL1Q6UWQ5 148 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 C14orf178Q8N769 122 aaPredicted RBP8.48□□□□□ -1.05
PTCH1-206ENST00000421141 TRBV25-1A0A075B6N4 114 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 TRBV7-9A0A0J9YWB2 115 aa8.48□□□□□ -1.05
PTCH1-206ENST00000421141 PFN1P07737 140 aaKnown RBP8.47□□□□□ -1.05
PTCH1-206ENST00000421141 TEX43Q6ZNM6 134 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 KLK9Q9UKQ9 250 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 CEP295Q9C0D2 2601 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 TMEM89A2RUT3 159 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 MYCNOSP40205 109 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 MORN3Q6PF18 240 aaPredicted RBP8.47□□□□□ -1.05
PTCH1-206ENST00000421141 TRPT1Q86TN4 253 aaKnown RBP8.47□□□□□ -1.05
PTCH1-206ENST00000421141 A0A087WWL8 130 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 THAP8Q8NA92 274 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 SPAG8Q99932 426 aaPredicted RBP8.47□□□□□ -1.05
PTCH1-206ENST00000421141 PAX9P55771 341 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 TRAV12-2A0A075B6T6 113 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 GAGE12BA1L429 117 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 GAGE7O76087 117 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 LINC00614P0C842 121 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 GAGE12FP0CL80 117 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 GAGE12GP0CL81 117 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 GAGE12IP0CL82 117 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 LYL1P12980 280 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 SLC25A34Q6PIV7 304 aa8.47□□□□□ -1.05
PTCH1-206ENST00000421141 TRBV19A0A075B6N1 114 aa8.46□□□□□ -1.05
PTCH1-206ENST00000421141 IGLC7A0M8Q6 106 aa8.46□□□□□ -1.05
PTCH1-206ENST00000421141 NDUFA11Q86Y39 141 aa8.46□□□□□ -1.05
PTCH1-206ENST00000421141 CARHSP1Q9Y2V2 147 aaKnown RBP8.46□□□□□ -1.05
PTCH1-206ENST00000421141 HAPLN4Q86UW8 402 aa8.46□□□□□ -1.05
PTCH1-206ENST00000421141 RNF152Q8N8N0 203 aa8.46□□□□□ -1.05
PTCH1-206ENST00000421141 CEP350Q5VT06 3117 aa8.46□□□□□ -1.06
PTCH1-206ENST00000421141 CHCHD1Q96BP2 118 aaKnown RBP8.46□□□□□ -1.06
PTCH1-206ENST00000421141 SRSF2Q01130 221 aaKnown RBP8.46□□□□□ -1.06
PTCH1-206ENST00000421141 Q8N9W7 124 aa8.46□□□□□ -1.06
PTCH1-206ENST00000421141 IL17DQ8TAD2 202 aa8.46□□□□□ -1.06
PTCH1-206ENST00000421141 CHTOPQ9Y3Y2 248 aaKnown RBP8.46□□□□□ -1.06
PTCH1-206ENST00000421141 TNFRSF13BO14836 293 aaPredicted RBP8.46□□□□□ -1.06
PTCH1-206ENST00000421141 Q86TA4 180 aa8.46□□□□□ -1.06
PTCH1-206ENST00000421141 ZNF114Q8NC26 417 aa8.46□□□□□ -1.06
PTCH1-206ENST00000421141 CSTL1Q9H114 145 aa8.46□□□□□ -1.06
PTCH1-206ENST00000421141 UQCR10Q9UDW1 63 aa8.46□□□□□ -1.06
PTCH1-206ENST00000421141 SMPXQ9UHP9 88 aa8.46□□□□□ -1.06
PTCH1-206ENST00000421141 PGPEP1LA6NFU8 196 aa8.45□□□□□ -1.06
PTCH1-206ENST00000421141 FN1P02751 2386 aaKnown RBP8.45□□□□□ -1.06
PTCH1-206ENST00000421141 IGLC1P0CG04 106 aa8.45□□□□□ -1.06
PTCH1-206ENST00000421141 LBHQ53QV2 105 aaPredicted RBP8.45□□□□□ -1.06
PTCH1-206ENST00000421141 SIRPDQ9H106 197 aa8.45□□□□□ -1.06
PTCH1-206ENST00000421141 DSCAML1Q8TD84 2053 aa8.45□□□□□ -1.06
PTCH1-206ENST00000421141 DPM2O94777 84 aa8.45□□□□□ -1.06
PTCH1-206ENST00000421141 SMAD5-AS1Q9Y6J3 95 aa8.45□□□□□ -1.06
PTCH1-206ENST00000421141 LY96Q9Y6Y9 160 aa8.45□□□□□ -1.06
PTCH1-206ENST00000421141 CITED2Q99967 270 aaPredicted RBP8.45□□□□□ -1.06
PTCH1-206ENST00000421141 D6R8Y8 96 aa8.45□□□□□ -1.06
PTCH1-206ENST00000421141 WIPF2Q8TF74 440 aaPredicted RBP8.45□□□□□ -1.06
PTCH1-206ENST00000421141 ARMS2P0C7Q2 107 aa8.45□□□□□ -1.06
PTCH1-206ENST00000421141 IGF2BP2-AS1Q96M15 143 aa8.45□□□□□ -1.06
PTCH1-206ENST00000421141 AGRNO00468 2067 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms