RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 TRAV10A0A0B4J240 114 aa11.33□□□□□ -0.6
VAT1-202ENST00000420567 TRAV12-3A0A0B4J271 114 aa11.33□□□□□ -0.6
VAT1-202ENST00000420567 C11orf94C9JXX5 98 aa11.33□□□□□ -0.6
VAT1-202ENST00000420567 TAS2R60P59551 318 aa11.33□□□□□ -0.6
VAT1-202ENST00000420567 TMEM78Q5T7P6 136 aa11.33□□□□□ -0.6
VAT1-202ENST00000420567 C9orf47Q6ZRZ4 202 aa11.33□□□□□ -0.6
VAT1-202ENST00000420567 KCNRGQ8N5I3 272 aa11.33□□□□□ -0.6
VAT1-202ENST00000420567 Q8TAT8 98 aa11.33□□□□□ -0.6
VAT1-202ENST00000420567 C2CD4CQ8TF44 421 aa11.33□□□□□ -0.6
VAT1-202ENST00000420567 FAM19A4Q96LR4 140 aa11.33□□□□□ -0.6
VAT1-202ENST00000420567 LINC00477Q96M19 166 aa11.33□□□□□ -0.6
VAT1-202ENST00000420567 ACTR3CQ9C0K3 210 aaPredicted RBP11.33□□□□□ -0.6
VAT1-202ENST00000420567 OTORQ9NRC9 128 aa11.33□□□□□ -0.6
VAT1-202ENST00000420567 PGPA6NDG6 321 aa11.32□□□□□ -0.6
VAT1-202ENST00000420567 H7BYZ3 331 aa11.32□□□□□ -0.6
VAT1-202ENST00000420567 BTN1A1Q13410 526 aa11.32□□□□□ -0.6
VAT1-202ENST00000420567 ZNF345Q14585 488 aa11.32□□□□□ -0.6
VAT1-202ENST00000420567 ARPC5LQ9BPX5 153 aa11.32□□□□□ -0.6
VAT1-202ENST00000420567 C20orf144Q9BQM9 153 aa11.32□□□□□ -0.6
VAT1-202ENST00000420567 TEX48A0A1B0GUV7 120 aa11.31□□□□□ -0.6
VAT1-202ENST00000420567 PLAC8L1A1L4L8 177 aa11.31□□□□□ -0.6
VAT1-202ENST00000420567 C7orf71A4D174 169 aa11.31□□□□□ -0.6
VAT1-202ENST00000420567 IGLL5B9A064 214 aa11.31□□□□□ -0.6
VAT1-202ENST00000420567 DIRC3C9JPN6 131 aa11.31□□□□□ -0.6
VAT1-202ENST00000420567 SLC25A5P05141 298 aaKnown RBP11.31□□□□□ -0.6
VAT1-202ENST00000420567 GCHFRP30047 84 aa11.31□□□□□ -0.6
VAT1-202ENST00000420567 CD300CQ08708 224 aa11.31□□□□□ -0.6
VAT1-202ENST00000420567 PLECQ15149 4684 aaKnown RBP11.31□□□□□ -0.6
VAT1-202ENST00000420567 ZNF726P1Q15940 193 aa11.31□□□□□ -0.6
VAT1-202ENST00000420567 PRR9Q5T870 116 aa11.31□□□□□ -0.6
VAT1-202ENST00000420567 Q6ZNX1 250 aa11.31□□□□□ -0.6
VAT1-202ENST00000420567 CMTM2Q8TAZ6 248 aa11.31□□□□□ -0.6
VAT1-202ENST00000420567 LINC00476Q8WZB0 136 aa11.31□□□□□ -0.6
VAT1-202ENST00000420567 NIPSNAP3BQ9BS92 247 aa11.31□□□□□ -0.6
VAT1-202ENST00000420567 ZNF492Q9P255 531 aa11.31□□□□□ -0.6
VAT1-202ENST00000420567 TENM2Q9NT68 2774 aa11.3□□□□□ -0.6
VAT1-202ENST00000420567 DEFB131BA0A096LNP1 70 aa11.3□□□□□ -0.6
VAT1-202ENST00000420567 HMSDA8MTL9 139 aa11.3□□□□□ -0.6
VAT1-202ENST00000420567 KLLNB2CW77 178 aa11.3□□□□□ -0.6
VAT1-202ENST00000420567 CRISP2P16562 243 aa11.3□□□□□ -0.6
VAT1-202ENST00000420567 RNASE4P34096 147 aaKnown RBP11.3□□□□□ -0.6
VAT1-202ENST00000420567 ZNF138P52744 262 aa11.3□□□□□ -0.6
VAT1-202ENST00000420567 GNG5P63218 68 aa11.3□□□□□ -0.6
VAT1-202ENST00000420567 FAM74A1Q5RGS3 127 aa11.3□□□□□ -0.6
VAT1-202ENST00000420567 AKR1C8PQ5T2L2 129 aa11.3□□□□□ -0.6
VAT1-202ENST00000420567 IQCF2Q8IXL9 164 aa11.3□□□□□ -0.6
VAT1-202ENST00000420567 RXFP4Q8TDU9 374 aa11.3□□□□□ -0.6
VAT1-202ENST00000420567 C16orf74Q96GX8 76 aa11.3□□□□□ -0.6
VAT1-202ENST00000420567 hCG_2014768A0A024R1R8 64 aa11.29□□□□□ -0.6
VAT1-202ENST00000420567 RBAKDNA6NC62 111 aa11.29□□□□□ -0.6
VAT1-202ENST00000420567 BCL2L11O43521 198 aa11.29□□□□□ -0.6
VAT1-202ENST00000420567 LY6G6CO95867 125 aa11.29□□□□□ -0.6
VAT1-202ENST00000420567 CXorf1O96002 111 aa11.29□□□□□ -0.6
VAT1-202ENST00000420567 GPX1P07203 203 aa11.29□□□□□ -0.6
VAT1-202ENST00000420567 ZFAND2AQ8N6M9 145 aa11.29□□□□□ -0.6
VAT1-202ENST00000420567 RNASE8Q8TDE3 154 aaKnown RBP11.29□□□□□ -0.6
VAT1-202ENST00000420567 ST6GAL2Q96JF0 529 aa11.29□□□□□ -0.6
VAT1-202ENST00000420567 CTXND1A0A1B0GTU2 59 aa11.28□□□□□ -0.6
VAT1-202ENST00000420567 KANTRA0A1W2PQU2 76 aa11.28□□□□□ -0.6
VAT1-202ENST00000420567 HTN3P15516 51 aa11.28□□□□□ -0.6
VAT1-202ENST00000420567 DAD1P61803 113 aa11.28□□□□□ -0.6
VAT1-202ENST00000420567 GOLT1AQ6ZVE7 132 aa11.28□□□□□ -0.6
VAT1-202ENST00000420567 TMEM263Q8WUH6 116 aaKnown RBP11.28□□□□□ -0.6
VAT1-202ENST00000420567 ZNF471Q9BX82 626 aaPredicted RBP11.28□□□□□ -0.6
VAT1-202ENST00000420567 SACSQ9NZJ4 4579 aa11.28□□□□□ -0.6
VAT1-202ENST00000420567 ALMS1Q8TCU4 4167 aa11.27□□□□□ -0.6
VAT1-202ENST00000420567 IGHV4-4A0A075B6R2 117 aa11.27□□□□□ -0.61
VAT1-202ENST00000420567 A0A0D9SG52 128 aa11.27□□□□□ -0.61
VAT1-202ENST00000420567 LYRM9A8MSI8 78 aa11.27□□□□□ -0.61
VAT1-202ENST00000420567 DEFB130BP0DP73 79 aa11.27□□□□□ -0.61
VAT1-202ENST00000420567 DEFB130AP0DP74 79 aa11.27□□□□□ -0.61
VAT1-202ENST00000420567 FGF8P55075 233 aaPredicted RBP11.27□□□□□ -0.61
VAT1-202ENST00000420567 Q6ZQT7 251 aa11.27□□□□□ -0.61
VAT1-202ENST00000420567 CCDC28AQ8IWP9 274 aa11.27□□□□□ -0.61
VAT1-202ENST00000420567 SUN5Q8TC36 379 aa11.27□□□□□ -0.61
VAT1-202ENST00000420567 LYSTQ99698 3801 aa11.27□□□□□ -0.61
VAT1-202ENST00000420567 PYGO2Q9BRQ0 406 aa11.27□□□□□ -0.61
VAT1-202ENST00000420567 TMPRSS5Q9H3S3 457 aa11.27□□□□□ -0.61
VAT1-202ENST00000420567 TMEM167BQ9NRX6 74 aa11.27□□□□□ -0.61
VAT1-202ENST00000420567 APLNQ9ULZ1 77 aa11.27□□□□□ -0.61
VAT1-202ENST00000420567 TRAV8-1A0A0A6YYK1 113 aa11.26□□□□□ -0.61
VAT1-202ENST00000420567 GGTLC3B5MD39 225 aa11.26□□□□□ -0.61
VAT1-202ENST00000420567 PFDN1O60925 122 aa11.26□□□□□ -0.61
VAT1-202ENST00000420567 ZNF493Q6ZR52 646 aa11.26□□□□□ -0.61
VAT1-202ENST00000420567 TMUB2Q71RG4 321 aa11.26□□□□□ -0.61
VAT1-202ENST00000420567 NOP10Q9NPE3 64 aaKnown RBP11.26□□□□□ -0.61
VAT1-202ENST00000420567 ZNF324O75467 553 aaPredicted RBP11.25□□□□□ -0.61
VAT1-202ENST00000420567 NMBP08949 121 aa11.25□□□□□ -0.61
VAT1-202ENST00000420567 FHITP49789 147 aa11.25□□□□□ -0.61
VAT1-202ENST00000420567 TCTE3Q8IZS6 198 aa11.25□□□□□ -0.61
VAT1-202ENST00000420567 SGK494Q96LW2 274 aa11.25□□□□□ -0.61
VAT1-202ENST00000420567 TIMM8BQ9Y5J9 83 aaPredicted RBP11.25□□□□□ -0.61
VAT1-202ENST00000420567 TRBV7-9A0A0J9YWB2 115 aa11.24□□□□□ -0.61
VAT1-202ENST00000420567 MAP1LC3B2A6NCE7 125 aa11.24□□□□□ -0.61
VAT1-202ENST00000420567 CBY3A6NI87 242 aa11.24□□□□□ -0.61
VAT1-202ENST00000420567 RGS13O14921 159 aa11.24□□□□□ -0.61
VAT1-202ENST00000420567 TCRAP04437 139 aa11.24□□□□□ -0.61
VAT1-202ENST00000420567 TCTAP57738 103 aa11.24□□□□□ -0.61
VAT1-202ENST00000420567 UBE2G2P60604 165 aa11.24□□□□□ -0.61
VAT1-202ENST00000420567 SUMO1P63165 101 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms