RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 OTORQ9NRC9 128 aa11.88□□□□□ -0.51
SEC22C-206ENST00000420163 LOC102723971A0A1B0GUV8 181 aa11.87□□□□□ -0.51
SEC22C-206ENST00000420163 KANTRA0A1W2PQU2 76 aa11.87□□□□□ -0.51
SEC22C-206ENST00000420163 PGPA6NDG6 321 aa11.87□□□□□ -0.51
SEC22C-206ENST00000420163 HBE1P02100 147 aa11.87□□□□□ -0.51
SEC22C-206ENST00000420163 TSPOP30536 169 aa11.87□□□□□ -0.51
SEC22C-206ENST00000420163 RRN3P1Q2M238 152 aa11.87□□□□□ -0.51
SEC22C-206ENST00000420163 AKR1C8PQ5T2L2 129 aa11.87□□□□□ -0.51
SEC22C-206ENST00000420163 TMUB2Q71RG4 321 aa11.87□□□□□ -0.51
SEC22C-206ENST00000420163 ZNF767PQ75MW2 155 aa11.87□□□□□ -0.51
SEC22C-206ENST00000420163 HYLS1Q96M11 299 aa11.87□□□□□ -0.51
SEC22C-206ENST00000420163 LINC00477Q96M19 166 aa11.87□□□□□ -0.51
SEC22C-206ENST00000420163 ZNF471Q9BX82 626 aaPredicted RBP11.87□□□□□ -0.51
SEC22C-206ENST00000420163 CTXND1A0A1B0GTU2 59 aa11.86□□□□□ -0.51
SEC22C-206ENST00000420163 AZU1P20160 251 aa11.86□□□□□ -0.51
SEC22C-206ENST00000420163 LEPP41159 167 aa11.86□□□□□ -0.51
SEC22C-206ENST00000420163 AKAP14Q86UN6 197 aa11.86□□□□□ -0.51
SEC22C-206ENST00000420163 Q8TAT8 98 aa11.86□□□□□ -0.51
SEC22C-206ENST00000420163 PHLDA1Q8WV24 401 aaPredicted RBP11.86□□□□□ -0.51
SEC22C-206ENST00000420163 RPH3ALQ9UNE2 315 aa11.86□□□□□ -0.51
SEC22C-206ENST00000420163 DIRC3C9JPN6 131 aa11.85□□□□□ -0.51
SEC22C-206ENST00000420163 CXorf1O96002 111 aa11.85□□□□□ -0.51
SEC22C-206ENST00000420163 CSN1S1P47710 185 aa11.85□□□□□ -0.51
SEC22C-206ENST00000420163 FGF8P55075 233 aaPredicted RBP11.85□□□□□ -0.51
SEC22C-206ENST00000420163 GNG5P63218 68 aa11.85□□□□□ -0.51
SEC22C-206ENST00000420163 LGALSLQ3ZCW2 172 aaPredicted RBP11.85□□□□□ -0.51
SEC22C-206ENST00000420163 TMEM78Q5T7P6 136 aa11.85□□□□□ -0.51
SEC22C-206ENST00000420163 CEMP1Q6PRD7 247 aaPredicted RBP11.85□□□□□ -0.51
SEC22C-206ENST00000420163 Q6ZTC4 211 aa11.85□□□□□ -0.51
SEC22C-206ENST00000420163 LINC01587Q99440 93 aa11.85□□□□□ -0.51
SEC22C-206ENST00000420163 TMPRSS5Q9H3S3 457 aa11.85□□□□□ -0.51
SEC22C-206ENST00000420163 TRAV12-3A0A0B4J271 114 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 PLAC8L1A1L4L8 177 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 KLLNB2CW77 178 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 PFDN1O60925 122 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 C1QBP02746 253 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 CRISP2P16562 243 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 FHITP49789 147 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 BTN1A1Q13410 526 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 C12orf74Q32Q52 190 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 PRR9Q5T870 116 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 IQCF2Q8IXL9 164 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 TMEM256Q8N2U0 113 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 ZFAND2AQ8N6M9 145 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 ZNF492Q9P255 531 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 YTHDF2Q9Y5A9 579 aaKnown RBP11.84□□□□□ -0.51
SEC22C-206ENST00000420163 HYDINQ4G0P3 5121 aa11.84□□□□□ -0.51
SEC22C-206ENST00000420163 TMEM189A5PLL7 270 aa11.83□□□□□ -0.52
SEC22C-206ENST00000420163 RBAKDNA6NC62 111 aa11.83□□□□□ -0.52
SEC22C-206ENST00000420163 NUPR2A6NF83 97 aa11.83□□□□□ -0.52
SEC22C-206ENST00000420163 GGTLC3B5MD39 225 aa11.83□□□□□ -0.52
SEC22C-206ENST00000420163 SEC11BP0C7V7 166 aa11.83□□□□□ -0.52
SEC22C-206ENST00000420163 ZNF138P52744 262 aa11.83□□□□□ -0.52
SEC22C-206ENST00000420163 FAM222AQ5U5X8 452 aa11.83□□□□□ -0.52
SEC22C-206ENST00000420163 GOLT1AQ6ZVE7 132 aa11.83□□□□□ -0.52
SEC22C-206ENST00000420163 RXFP4Q8TDU9 374 aa11.83□□□□□ -0.52
SEC22C-206ENST00000420163 TMEM167BQ9NRX6 74 aa11.83□□□□□ -0.52
SEC22C-206ENST00000420163 DKK2Q9UBU2 259 aa11.83□□□□□ -0.52
SEC22C-206ENST00000420163 C7orf71A4D174 169 aa11.82□□□□□ -0.52
SEC22C-206ENST00000420163 MAP1LC3B2A6NCE7 125 aa11.82□□□□□ -0.52
SEC22C-206ENST00000420163 H7BYZ3 331 aa11.82□□□□□ -0.52
SEC22C-206ENST00000420163 SLC25A5P05141 298 aaKnown RBP11.82□□□□□ -0.52
SEC22C-206ENST00000420163 HTN1P15515 57 aa11.82□□□□□ -0.52
SEC22C-206ENST00000420163 TAS2R60P59551 318 aa11.82□□□□□ -0.52
SEC22C-206ENST00000420163 FAM74A1Q5RGS3 127 aa11.82□□□□□ -0.52
SEC22C-206ENST00000420163 Q6ZQT7 251 aa11.82□□□□□ -0.52
SEC22C-206ENST00000420163 CMTM2Q8TAZ6 248 aa11.82□□□□□ -0.52
SEC22C-206ENST00000420163 TMED6Q8WW62 240 aa11.82□□□□□ -0.52
SEC22C-206ENST00000420163 C20orf144Q9BQM9 153 aa11.82□□□□□ -0.52
SEC22C-206ENST00000420163 MAP1LC3BQ9GZQ8 125 aa11.82□□□□□ -0.52
SEC22C-206ENST00000420163 TRAV8-1A0A0A6YYK1 113 aa11.81□□□□□ -0.52
SEC22C-206ENST00000420163 SPART-AS1P0CW21 52 aa11.81□□□□□ -0.52
SEC22C-206ENST00000420163 RNASE4P34096 147 aaKnown RBP11.81□□□□□ -0.52
SEC22C-206ENST00000420163 STOML3Q8TAV4 291 aa11.81□□□□□ -0.52
SEC22C-206ENST00000420163 ZNF324O75467 553 aaPredicted RBP11.8□□□□□ -0.52
SEC22C-206ENST00000420163 GPX1P07203 203 aa11.8□□□□□ -0.52
SEC22C-206ENST00000420163 TPT1P13693 172 aaKnown RBP11.8□□□□□ -0.52
SEC22C-206ENST00000420163 UBE2G2P60604 165 aa11.8□□□□□ -0.52
SEC22C-206ENST00000420163 C5orf17Q8NAS9 161 aa11.8□□□□□ -0.52
SEC22C-206ENST00000420163 FAM213BQ8TBF2 198 aa11.8□□□□□ -0.52
SEC22C-206ENST00000420163 RNASE8Q8TDE3 154 aaKnown RBP11.8□□□□□ -0.52
SEC22C-206ENST00000420163 LCE6AA0A183 80 aa11.79□□□□□ -0.52
SEC22C-206ENST00000420163 NMBP08949 121 aa11.79□□□□□ -0.52
SEC22C-206ENST00000420163 SUMO1P63165 101 aaKnown RBP11.79□□□□□ -0.52
SEC22C-206ENST00000420163 EIF5AP63241 154 aaKnown RBP11.79□□□□□ -0.52
SEC22C-206ENST00000420163 C9orf62Q8N4C0 152 aa11.79□□□□□ -0.52
SEC22C-206ENST00000420163 ARL6IP6Q8N6S5 226 aa11.79□□□□□ -0.52
SEC22C-206ENST00000420163 TVP23CQ96ET8 276 aa11.79□□□□□ -0.52
SEC22C-206ENST00000420163 SGK494Q96LW2 274 aa11.79□□□□□ -0.52
SEC22C-206ENST00000420163 NIPSNAP3BQ9BS92 247 aa11.79□□□□□ -0.52
SEC22C-206ENST00000420163 TRAV10A0A0B4J240 114 aa11.78□□□□□ -0.52
SEC22C-206ENST00000420163 TRBV7-9A0A0J9YWB2 115 aa11.78□□□□□ -0.52
SEC22C-206ENST00000420163 A0A1W2PRE2 83 aa11.78□□□□□ -0.52
SEC22C-206ENST00000420163 TCRAP04437 139 aa11.78□□□□□ -0.52
SEC22C-206ENST00000420163 TMEM263Q8WUH6 116 aaKnown RBP11.78□□□□□ -0.52
SEC22C-206ENST00000420163 C16orf74Q96GX8 76 aa11.78□□□□□ -0.52
SEC22C-206ENST00000420163 KLK5Q9Y337 293 aaPredicted RBP11.78□□□□□ -0.52
SEC22C-206ENST00000420163 A0A1B0GV50 99 aa11.77□□□□□ -0.53
SEC22C-206ENST00000420163 UMAD1C9J7I0 102 aa11.77□□□□□ -0.53
SEC22C-206ENST00000420163 C11orf94C9JXX5 98 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms