RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 BAGE2Q86Y30 109 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 TMEM183AQ8IXX5 376 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 RNF182Q8N6D2 247 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 CLRN3Q8NCR9 226 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 CLUHP3Q96NS8 147 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 ODF3Q96PU9 254 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 PSG8Q9UQ74 426 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 ZNF705FA8MVS1 300 aaPredicted RBP10.64□□□□□ -0.71
SHMT1P1-201ENST00000419974 GCGP01275 180 aa10.64□□□□□ -0.71
SHMT1P1-201ENST00000419974 ZNF674Q2M3X9 581 aa10.64□□□□□ -0.71
SHMT1P1-201ENST00000419974 IGFL4Q6B9Z1 124 aa10.64□□□□□ -0.71
SHMT1P1-201ENST00000419974 OR8A1Q8NGG7 326 aa10.64□□□□□ -0.71
SHMT1P1-201ENST00000419974 OCC1Q8TAD7 63 aa10.64□□□□□ -0.71
SHMT1P1-201ENST00000419974 FAM19A4Q96LR4 140 aa10.64□□□□□ -0.71
SHMT1P1-201ENST00000419974 GPR61Q9BZJ8 451 aa10.64□□□□□ -0.71
SHMT1P1-201ENST00000419974 PRAC2D3DTV9 90 aa10.63□□□□□ -0.71
SHMT1P1-201ENST00000419974 FOXI2Q6ZQN5 318 aa10.63□□□□□ -0.71
SHMT1P1-201ENST00000419974 GBGT1Q8N5D6 347 aa10.63□□□□□ -0.71
SHMT1P1-201ENST00000419974 ZNF738Q8NE65 137 aa10.63□□□□□ -0.71
SHMT1P1-201ENST00000419974 OR10J6PQ8NGY7 276 aa10.63□□□□□ -0.71
SHMT1P1-201ENST00000419974 ZNF492Q9P255 531 aa10.63□□□□□ -0.71
SHMT1P1-201ENST00000419974 TRAV34A0A0B4J273 112 aa10.62□□□□□ -0.71
SHMT1P1-201ENST00000419974 ZNF138P52744 262 aa10.62□□□□□ -0.71
SHMT1P1-201ENST00000419974 FAM231DQ6ZW35 169 aa10.62□□□□□ -0.71
SHMT1P1-201ENST00000419974 APRG1Q8IVJ8 170 aa10.62□□□□□ -0.71
SHMT1P1-201ENST00000419974 FAM24BQ8N5W8 94 aa10.62□□□□□ -0.71
SHMT1P1-201ENST00000419974 ISOC2Q96AB3 205 aa10.62□□□□□ -0.71
SHMT1P1-201ENST00000419974 PRR25Q96S07 402 aa10.62□□□□□ -0.71
SHMT1P1-201ENST00000419974 VGLL1Q99990 258 aa10.62□□□□□ -0.71
SHMT1P1-201ENST00000419974 CTDSP1Q9GZU7 261 aa10.62□□□□□ -0.71
SHMT1P1-201ENST00000419974 AGPAT4-IT1Q9H0P7 198 aa10.62□□□□□ -0.71
SHMT1P1-201ENST00000419974 SAV1Q9H4B6 383 aaPredicted RBP10.62□□□□□ -0.71
SHMT1P1-201ENST00000419974 CMYA5Q8N3K9 4069 aa10.62□□□□□ -0.71
SHMT1P1-201ENST00000419974 WNK1Q9H4A3 2382 aa10.62□□□□□ -0.71
SHMT1P1-201ENST00000419974 IGKV3-7A0A075B6H7 116 aa10.61□□□□□ -0.71
SHMT1P1-201ENST00000419974 IGKV2-40A0A087WW87 121 aaPredicted RBP10.61□□□□□ -0.71
SHMT1P1-201ENST00000419974 TRAV8-1A0A0A6YYK1 113 aa10.61□□□□□ -0.71
SHMT1P1-201ENST00000419974 A0A0J9YX75 114 aa10.61□□□□□ -0.71
SHMT1P1-201ENST00000419974 K7EN84 100 aa10.61□□□□□ -0.71
SHMT1P1-201ENST00000419974 DUSP14O95147 198 aaKnown RBP10.61□□□□□ -0.71
SHMT1P1-201ENST00000419974 IGKV2D-40P01614 121 aaPredicted RBP10.61□□□□□ -0.71
SHMT1P1-201ENST00000419974 CRISP2P16562 243 aa10.61□□□□□ -0.71
SHMT1P1-201ENST00000419974 TMEM78Q5T7P6 136 aa10.61□□□□□ -0.71
SHMT1P1-201ENST00000419974 C7orf77A4D0Y5 90 aa10.6□□□□□ -0.71
SHMT1P1-201ENST00000419974 IZUMO1RA6ND01 250 aa10.6□□□□□ -0.71
SHMT1P1-201ENST00000419974 PPP1R2P9O14990 202 aa10.6□□□□□ -0.71
SHMT1P1-201ENST00000419974 ZNF688P0C7X2 276 aa10.6□□□□□ -0.71
SHMT1P1-201ENST00000419974 CD33P20138 364 aa10.6□□□□□ -0.71
SHMT1P1-201ENST00000419974 PSMG4Q5JS54 123 aa10.6□□□□□ -0.71
SHMT1P1-201ENST00000419974 WFDC3Q8IUB2 231 aa10.6□□□□□ -0.71
SHMT1P1-201ENST00000419974 ANAPC16Q96DE5 110 aa10.6□□□□□ -0.71
SHMT1P1-201ENST00000419974 NDFIP1Q9BT67 221 aa10.6□□□□□ -0.71
SHMT1P1-201ENST00000419974 TUBA4BQ9H853 241 aa10.6□□□□□ -0.71
SHMT1P1-201ENST00000419974 OSTCQ9NRP0 149 aa10.6□□□□□ -0.71
SHMT1P1-201ENST00000419974 RPH3ALQ9UNE2 315 aa10.6□□□□□ -0.71
SHMT1P1-201ENST00000419974 CXorf65A6NEN9 183 aa10.59□□□□□ -0.71
SHMT1P1-201ENST00000419974 MT-ND4LP03901 98 aa10.59□□□□□ -0.71
SHMT1P1-201ENST00000419974 HLA-DRB4P13762 266 aa10.59□□□□□ -0.71
SHMT1P1-201ENST00000419974 ADIRFQ15847 76 aa10.59□□□□□ -0.71
SHMT1P1-201ENST00000419974 EBLN2Q6P2I7 272 aa10.59□□□□□ -0.71
SHMT1P1-201ENST00000419974 PRNTQ86SH4 94 aa10.59□□□□□ -0.71
SHMT1P1-201ENST00000419974 SFRP2Q96HF1 295 aa10.59□□□□□ -0.71
SHMT1P1-201ENST00000419974 MAP6D1Q9H9H5 199 aa10.59□□□□□ -0.71
SHMT1P1-201ENST00000419974 HLA-DRB4X5D2U9 266 aa10.59□□□□□ -0.71
SHMT1P1-201ENST00000419974 C19orf71A6NCJ1 209 aa10.58□□□□□ -0.71
SHMT1P1-201ENST00000419974 M0R036 132 aa10.58□□□□□ -0.71
SHMT1P1-201ENST00000419974 TFPI2P48307 235 aa10.58□□□□□ -0.71
SHMT1P1-201ENST00000419974 ODF3L2Q3SX64 289 aa10.58□□□□□ -0.71
SHMT1P1-201ENST00000419974 IMMP2LQ96T52 175 aa10.58□□□□□ -0.71
SHMT1P1-201ENST00000419974 C19orf73Q9NVV2 129 aa10.58□□□□□ -0.71
SHMT1P1-201ENST00000419974 PGPEP1LA6NFU8 196 aa10.58□□□□□ -0.72
SHMT1P1-201ENST00000419974 H3BMM0 161 aa10.58□□□□□ -0.72
SHMT1P1-201ENST00000419974 CT45A10P0DMU9 189 aa10.58□□□□□ -0.72
SHMT1P1-201ENST00000419974 DEFB131AP59861 70 aa10.58□□□□□ -0.72
SHMT1P1-201ENST00000419974 ERCC8Q13216 396 aa10.58□□□□□ -0.72
SHMT1P1-201ENST00000419974 SMUG1Q53HV7 270 aa10.58□□□□□ -0.72
SHMT1P1-201ENST00000419974 CT83Q5H943 113 aa10.58□□□□□ -0.72
SHMT1P1-201ENST00000419974 ATRAIDQ6UW56 229 aa10.58□□□□□ -0.72
SHMT1P1-201ENST00000419974 ZMAT5Q9UDW3 170 aaKnown RBP10.58□□□□□ -0.72
SHMT1P1-201ENST00000419974 KLLNB2CW77 178 aa10.57□□□□□ -0.72
SHMT1P1-201ENST00000419974 OR11H12B2RN74 326 aa10.57□□□□□ -0.72
SHMT1P1-201ENST00000419974 RNF212Q495C1 297 aa10.57□□□□□ -0.72
SHMT1P1-201ENST00000419974 ZFAND2AQ8N6M9 145 aa10.57□□□□□ -0.72
SHMT1P1-201ENST00000419974 SGK494Q96LW2 274 aa10.57□□□□□ -0.72
SHMT1P1-201ENST00000419974 ASCL2Q99929 193 aa10.57□□□□□ -0.72
SHMT1P1-201ENST00000419974 SELENOKQ9Y6D0 94 aa10.57□□□□□ -0.72
SHMT1P1-201ENST00000419974 F6UB75 175 aa10.56□□□□□ -0.72
SHMT1P1-201ENST00000419974 HIST1H1AQ02539 215 aaPredicted RBP10.56□□□□□ -0.72
SHMT1P1-201ENST00000419974 IBA57Q5T440 356 aaKnown RBP10.56□□□□□ -0.72
SHMT1P1-201ENST00000419974 FAM162BQ5T6X4 162 aa10.56□□□□□ -0.72
SHMT1P1-201ENST00000419974 GDF5OSQ5U4N7 250 aa10.56□□□□□ -0.72
SHMT1P1-201ENST00000419974 AMTNQ6UX39 209 aa10.56□□□□□ -0.72
SHMT1P1-201ENST00000419974 C15orf54Q8N8G6 183 aa10.56□□□□□ -0.72
SHMT1P1-201ENST00000419974 OR4B1Q8NGF8 309 aa10.56□□□□□ -0.72
SHMT1P1-201ENST00000419974 ZC2HC1AQ96GY0 325 aa10.56□□□□□ -0.72
SHMT1P1-201ENST00000419974 NOTCH1P46531 2555 aa10.55□□□□□ -0.72
SHMT1P1-201ENST00000419974 FAM231BA6NCW3 169 aa10.55□□□□□ -0.72
SHMT1P1-201ENST00000419974 FABP5P3A8MUU1 101 aa10.55□□□□□ -0.72
SHMT1P1-201ENST00000419974 PFN1P07737 140 aaKnown RBP10.55□□□□□ -0.72
SHMT1P1-201ENST00000419974 TSPOP30536 169 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms