RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 TVP23CQ96ET8 276 aa7.2□□□□□ -1.26
RIF1-202ENST00000414861 NIPSNAP3BQ9BS92 247 aa7.2□□□□□ -1.26
RIF1-202ENST00000414861 AGPAT4-IT1Q9H0P7 198 aa7.2□□□□□ -1.26
RIF1-202ENST00000414861 WFDC10AQ9H1F0 79 aa7.2□□□□□ -1.26
RIF1-202ENST00000414861 RBAKDNA6NC62 111 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 KNCNA6PVL3 124 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 LTAP01374 205 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 GNG4P50150 75 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 BEAN1Q3B7T3 259 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 APRG1Q8IVJ8 170 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 MCRIP2Q9BUT9 160 aaKnown RBP7.19□□□□□ -1.26
RIF1-202ENST00000414861 PSG8Q9UQ74 426 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 MGAM2Q2M2H8 2515 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 DNAH3Q8TD57 4116 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 NOTCH1P46531 2555 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 A0A0J9YX75 114 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 SERTM2A0A1B0GWG4 89 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 C9JCJ5 164 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 K7EN84 100 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 K7EQM0 130 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 WIPF1O43516 503 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 TAS2R60P59551 318 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 FAM74A3Q4VXF1 159 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 OXLD1Q5BKU9 147 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 C9orf47Q6ZRZ4 202 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 SDF2L1Q9HCN8 221 aa7.19□□□□□ -1.26
RIF1-202ENST00000414861 NPIPB6E9PJ23 425 aa7.18□□□□□ -1.26
RIF1-202ENST00000414861 RPL23P62829 140 aaKnown RBP7.18□□□□□ -1.26
RIF1-202ENST00000414861 LINC01551Q86U37 167 aa7.18□□□□□ -1.26
RIF1-202ENST00000414861 BAGE2Q86Y30 109 aa7.18□□□□□ -1.26
RIF1-202ENST00000414861 OCC1Q8TAD7 63 aa7.18□□□□□ -1.26
RIF1-202ENST00000414861 C8orf49Q96NF6 230 aa7.18□□□□□ -1.26
RIF1-202ENST00000414861 SAV1Q9H4B6 383 aaPredicted RBP7.18□□□□□ -1.26
RIF1-202ENST00000414861 C19orf73Q9NVV2 129 aa7.18□□□□□ -1.26
RIF1-202ENST00000414861 NAT8Q9UHE5 227 aa7.18□□□□□ -1.26
RIF1-202ENST00000414861 TMEM241Q24JQ0 296 aa7.18□□□□□ -1.26
RIF1-202ENST00000414861 OR10J6PQ8NGY7 276 aa7.18□□□□□ -1.26
RIF1-202ENST00000414861 MLST8Q9BVC4 326 aa7.18□□□□□ -1.26
RIF1-202ENST00000414861 TRBV6-1A0A0K0K1D8 114 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 IGKV3-20P01619 116 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 CT45A10P0DMU9 189 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 OR5I1Q13606 314 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 ADIRFQ15847 76 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 ACTL10Q5JWF8 245 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 PRR31Q5SQ13 230 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 ATRAIDQ6UW56 229 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 FOXI2Q6ZQN5 318 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 PRR25Q96S07 402 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 ZNF492Q9P255 531 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 OR11H12B2RN74 326 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 S100A9P06702 114 aaKnown RBP7.17□□□□□ -1.26
RIF1-202ENST00000414861 S100A1P23297 94 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 ZNF138P52744 262 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 TMEM78Q5T7P6 136 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 ZC2HC1AQ96GY0 325 aa7.17□□□□□ -1.26
RIF1-202ENST00000414861 M0R036 132 aa7.16□□□□□ -1.26
RIF1-202ENST00000414861 MGST1P10620 155 aaKnown RBP7.16□□□□□ -1.26
RIF1-202ENST00000414861 HLA-DRB4P13762 266 aa7.16□□□□□ -1.26
RIF1-202ENST00000414861 KIR3DS1Q14943 382 aa7.16□□□□□ -1.26
RIF1-202ENST00000414861 PRR9Q5T870 116 aa7.16□□□□□ -1.26
RIF1-202ENST00000414861 EBLN2Q6P2I7 272 aa7.16□□□□□ -1.26
RIF1-202ENST00000414861 LINC00322Q6ZN03 302 aaPredicted RBP7.16□□□□□ -1.26
RIF1-202ENST00000414861 TMEM183AQ8IXX5 376 aa7.16□□□□□ -1.26
RIF1-202ENST00000414861 HLA-DRB4X5D2U9 266 aa7.16□□□□□ -1.26
RIF1-202ENST00000414861 NBEAL1Q6ZS30 2694 aa7.16□□□□□ -1.26
RIF1-202ENST00000414861 RBMY1BA6NDE4 496 aaKnown RBP7.16□□□□□ -1.26
RIF1-202ENST00000414861 RBMY1EA6NEQ0 496 aaKnown RBP7.16□□□□□ -1.26
RIF1-202ENST00000414861 H3BMM0 161 aa7.16□□□□□ -1.26
RIF1-202ENST00000414861 RBMY1DP0C7P1 496 aaKnown RBP7.16□□□□□ -1.26
RIF1-202ENST00000414861 SVBPQ8N300 66 aa7.16□□□□□ -1.26
RIF1-202ENST00000414861 CLRN3Q8NCR9 226 aa7.16□□□□□ -1.26
RIF1-202ENST00000414861 OR4B1Q8NGF8 309 aa7.16□□□□□ -1.26
RIF1-202ENST00000414861 LY96Q9Y6Y9 160 aa7.16□□□□□ -1.26
RIF1-202ENST00000414861 ZNF80P51504 273 aaPredicted RBP7.15□□□□□ -1.26
RIF1-202ENST00000414861 PRR27Q6MZM9 219 aa7.15□□□□□ -1.26
RIF1-202ENST00000414861 AMTNQ6UX39 209 aa7.15□□□□□ -1.26
RIF1-202ENST00000414861 ZFAND2AQ8N6M9 145 aa7.15□□□□□ -1.26
RIF1-202ENST00000414861 ISOC2Q96AB3 205 aa7.15□□□□□ -1.26
RIF1-202ENST00000414861 FAM19A4Q96LR4 140 aa7.15□□□□□ -1.26
RIF1-202ENST00000414861 LINC00477Q96M19 166 aa7.15□□□□□ -1.26
RIF1-202ENST00000414861 ZFP30Q9Y2G7 519 aa7.15□□□□□ -1.26
RIF1-202ENST00000414861 FBLL1A6NHQ2 334 aaKnown RBP7.15□□□□□ -1.27
RIF1-202ENST00000414861 G3V4G9 280 aa7.15□□□□□ -1.27
RIF1-202ENST00000414861 J3KRW8 73 aa7.15□□□□□ -1.27
RIF1-202ENST00000414861 KRTAP10-11P60412 298 aa7.15□□□□□ -1.27
RIF1-202ENST00000414861 PNRC1Q12796 327 aaPredicted RBP7.15□□□□□ -1.27
RIF1-202ENST00000414861 Q6ZQT7 251 aa7.15□□□□□ -1.27
RIF1-202ENST00000414861 FAM110AQ9BQ89 295 aa7.15□□□□□ -1.27
RIF1-202ENST00000414861 PPP1R14DQ9NXH3 145 aa7.15□□□□□ -1.27
RIF1-202ENST00000414861 A8MTW9 85 aa7.14□□□□□ -1.27
RIF1-202ENST00000414861 M0R2Z0 102 aa7.14□□□□□ -1.27
RIF1-202ENST00000414861 GCGP01275 180 aa7.14□□□□□ -1.27
RIF1-202ENST00000414861 CRIP1P50238 77 aa7.14□□□□□ -1.27
RIF1-202ENST00000414861 DEFB125Q8N687 156 aa7.14□□□□□ -1.27
RIF1-202ENST00000414861 SMIM12Q96EX1 92 aa7.14□□□□□ -1.27
RIF1-202ENST00000414861 RNASE7Q9H1E1 156 aaKnown RBP7.14□□□□□ -1.27
RIF1-202ENST00000414861 SPINK13Q1W4C9 94 aa7.13□□□□□ -1.27
RIF1-202ENST00000414861 SAPCD1Q5SSQ6 148 aa7.13□□□□□ -1.27
RIF1-202ENST00000414861 GTSCR1Q86UQ5 136 aa7.13□□□□□ -1.27
RIF1-202ENST00000414861 NDFIP1Q9BT67 221 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms