RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 NDPQ00604 133 aa5.31□□□□□ -1.56
CPSF7-203ENST00000413184 EBI3Q14213 229 aa5.31□□□□□ -1.56
CPSF7-203ENST00000413184 C5orf64Q2M2E5 130 aa5.31□□□□□ -1.56
CPSF7-203ENST00000413184 ARPC1AQ92747 370 aa5.31□□□□□ -1.56
CPSF7-203ENST00000413184 TCEAL7Q9BRU2 100 aa5.31□□□□□ -1.56
CPSF7-203ENST00000413184 V9GYV3 84 aa5.31□□□□□ -1.56
CPSF7-203ENST00000413184 PEX7O00628 323 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 HYPMO75409 117 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 IGKV1-17P01599 117 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 S100A9P06702 114 aaKnown RBP5.3□□□□□ -1.56
CPSF7-203ENST00000413184 SNRPCP09234 159 aaKnown RBP5.3□□□□□ -1.56
CPSF7-203ENST00000413184 EGR2P11161 476 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-203ENST00000413184 PSG1P11464 419 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 TMEM11P17152 192 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 CNN1P51911 297 aaKnown RBP5.3□□□□□ -1.56
CPSF7-203ENST00000413184 TAS2R60P59551 318 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 KRTAP10-2P60368 255 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 LYZP61626 148 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 GNG5P63218 68 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 CX3CL1P78423 397 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 PDZD11Q5EBL8 140 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 CCDC144NLQ6NUI1 221 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 BTF3L4Q96K17 158 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 RBM14Q96PK6 669 aaKnown RBP5.3□□□□□ -1.56
CPSF7-203ENST00000413184 OSTCQ9NRP0 149 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 FBXL7Q9UJT9 491 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 HIGD1AQ9Y241 93 aa5.3□□□□□ -1.56
CPSF7-203ENST00000413184 TBL2Q9Y4P3 447 aaKnown RBP5.3□□□□□ -1.56
CPSF7-203ENST00000413184 IGLV11-55A0A075B6I3 123 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 TRAV9-1A0A075B6T8 112 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 TRAV34A0A0B4J273 112 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 NPIPB5A8MRT5 1133 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-203ENST00000413184 H3BTX0 84 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 SLC25A5P05141 298 aaKnown RBP5.29□□□□□ -1.56
CPSF7-203ENST00000413184 NBEAP1P0C6P0 100 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 HIST1H1BP16401 226 aaKnown RBP5.29□□□□□ -1.56
CPSF7-203ENST00000413184 ERVFC1-1P60608 527 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 RPEL1Q2QD12 228 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 COA6Q5JTJ3 125 aaKnown RBP5.29□□□□□ -1.56
CPSF7-203ENST00000413184 LEMD1Q68G75 181 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 Q8N9W7 124 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 STXBP6Q8NFX7 210 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 OR10D4PQ8NGN7 298 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 OR1L6Q8NGR2 347 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 BLNKQ8WV28 456 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 DLX4Q92988 240 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-203ENST00000413184 LINC00479Q96M42 142 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 FANCD2OSQ96PS1 177 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 RASL11BQ9BPW5 248 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 SLC25A39Q9BZJ4 359 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-203ENST00000413184 MRPL27Q9P0M9 148 aaKnown RBP5.29□□□□□ -1.56
CPSF7-203ENST00000413184 TRAPPC1Q9Y5R8 145 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 S4R3C0 116 aa5.29□□□□□ -1.56
CPSF7-203ENST00000413184 IGHV7-81A0A0B4J1V7 117 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 XKRY2A2RUG3 117 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 PGPA6NDG6 321 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 NCBP2LA6PVI3 153 aaKnown RBP5.28□□□□□ -1.56
CPSF7-203ENST00000413184 F8W735 103 aaPredicted RBP5.28□□□□□ -1.56
CPSF7-203ENST00000413184 H3BRN7 92 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 ISLRO14498 428 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 TOMM40O96008 361 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 IGLV1-51P01701 117 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 AMY1AP04745 511 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 MGST1P10620 155 aaKnown RBP5.28□□□□□ -1.56
CPSF7-203ENST00000413184 S100A2P29034 98 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 BMI1P35226 326 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 ADMP35318 185 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 YPEL3P61236 119 aaPredicted RBP5.28□□□□□ -1.56
CPSF7-203ENST00000413184 RANP62826 216 aaKnown RBP5.28□□□□□ -1.56
CPSF7-203ENST00000413184 TMEM183BQ1AE95 376 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 PYY3Q5JQD4 70 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 ZNF562Q6V9R5 426 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 TMEM183AQ8IXX5 376 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 TTC9CQ8N5M4 171 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 NHLRC2Q8NBF2 726 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 CCDC140Q96MF4 163 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 SHANK2-AS3Q9BTD1 123 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 RNASE7Q9H1E1 156 aaKnown RBP5.28□□□□□ -1.56
CPSF7-203ENST00000413184 Q9H3A6 140 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 NIT2Q9NQR4 276 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 ZNF586Q9NXT0 402 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 TMEM14CQ9P0S9 112 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 EPDR1Q9UM22 224 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 RPH3ALQ9UNE2 315 aa5.28□□□□□ -1.56
CPSF7-203ENST00000413184 GATCO43716 136 aaKnown RBP5.27□□□□□ -1.57
CPSF7-203ENST00000413184 AMBPP02760 352 aa5.27□□□□□ -1.57
CPSF7-203ENST00000413184 FABP1P07148 127 aa5.27□□□□□ -1.57
CPSF7-203ENST00000413184 RD3LP0DJH9 198 aa5.27□□□□□ -1.57
CPSF7-203ENST00000413184 HIST1H1EP10412 219 aaKnown RBP5.27□□□□□ -1.57
CPSF7-203ENST00000413184 FABP4P15090 132 aa5.27□□□□□ -1.57
CPSF7-203ENST00000413184 CBLN1P23435 193 aa5.27□□□□□ -1.57
CPSF7-203ENST00000413184 MFAP4P55083 255 aa5.27□□□□□ -1.57
CPSF7-203ENST00000413184 TCL1AP56279 114 aa5.27□□□□□ -1.57
CPSF7-203ENST00000413184 CDPF1Q6NVV7 123 aa5.27□□□□□ -1.57
CPSF7-203ENST00000413184 ZNF600Q6ZNG1 722 aa5.27□□□□□ -1.57
CPSF7-203ENST00000413184 FAM231DQ6ZW35 169 aa5.27□□□□□ -1.57
CPSF7-203ENST00000413184 BAGE2Q86Y30 109 aa5.27□□□□□ -1.57
CPSF7-203ENST00000413184 OR8I2Q8N0Y5 310 aa5.27□□□□□ -1.57
CPSF7-203ENST00000413184 ZNF491Q8N8L2 437 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms