RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 PAM16Q9Y3D7 125 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 UBE2L5PA0A1B0GUS4 154 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 A0A1W2PPV4 95 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 A0A1W2PRE2 83 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 C15orf62A8K5M9 175 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 H3BP45 60 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 J3KRW8 73 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 IAPPP10997 89 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 MYCNOSP40205 109 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 HNRNPA3P51991 378 aaKnown RBP4.08□□□□□ -1.76
LINC00342-201ENST00000412393 BRWD1-AS2P59051 145 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 CATR1Q13166 79 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 PSMG4Q5JS54 123 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 MRPL54Q6P161 138 aaKnown RBP4.08□□□□□ -1.76
LINC00342-201ENST00000412393 ZNF833PQ6ZTB9 187 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 ATP5L2Q7Z4Y8 100 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 SPATA12Q7Z6I5 190 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 ZNF114Q8NC26 417 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 PRSS3P2Q8NHM4 247 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 TSKUQ8WUA8 353 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 GATAD1Q8WUU5 269 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 IL1F10Q8WWZ1 152 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 HSD17B10Q99714 261 aaKnown RBP4.08□□□□□ -1.76
LINC00342-201ENST00000412393 PMCHL2Q9BQD1 86 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 MRPL20Q9BYC9 149 aaKnown RBP4.08□□□□□ -1.76
LINC00342-201ENST00000412393 SAMD10Q9BYL1 202 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 MS4A6AQ9H2W1 248 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 SLC25A22Q9H936 323 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 NPVFQ9HCQ7 196 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 TMEM167BQ9NRX6 74 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 DNAH3Q8TD57 4116 aa4.08□□□□□ -1.76
LINC00342-201ENST00000412393 SORL1Q92673 2214 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 FAM231BA6NCW3 169 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 IZUMO1RA6ND01 250 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 HELTA6NFD8 242 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 C2orf70A6NJV1 201 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 K7EN84 100 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 CCL24O00175 119 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 BMPR1BO00238 502 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 NBR2O15453 112 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 CA2P00918 260 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 SAA2P0DJI9 122 aaPredicted RBP4.07□□□□□ -1.76
LINC00342-201ENST00000412393 SMIM17P0DL12 118 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 CBLN1P23435 193 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 CNTFRP26992 372 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 CRYBB3P26998 211 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 GCHFRP30047 84 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 MC5RP33032 325 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 ATP5G3P48201 142 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 LINC00205P59089 165 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 BATFQ16520 125 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 CD300EQ496F6 205 aaPredicted RBP4.07□□□□□ -1.76
LINC00342-201ENST00000412393 SAMD13Q5VXD3 122 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 Q6ZN92 141 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 RNF152Q8N8N0 203 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 NHLRC2Q8NBF2 726 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 OR1L6Q8NGR2 347 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 OR4S2Q8NH73 311 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 RITA1Q96K30 269 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 DUX3Q96PT4 197 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 MCRIP2Q9BUT9 160 aaKnown RBP4.07□□□□□ -1.76
LINC00342-201ENST00000412393 IFI27L2Q9H2X8 130 aa4.07□□□□□ -1.76
LINC00342-201ENST00000412393 TNCP24821 2201 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 GRIFINA4D1Z8 144 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 SNURFLB1AK76 121 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 INS-IGF2F8WCM5 200 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 K7EIL1 84 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 RRHO14718 337 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 ATP6V0E1O15342 81 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 TNFSF12O43508 249 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 NXPH3O95157 252 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 NDUFA3O95167 84 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 IGLV2-8P01709 118 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 IGHG4P01861 327 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 IGF1P05019 195 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 CT45A6P0DMU7 189 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 CT45A5P0DMU8 189 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 CT45A7P0DMV0 189 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 HOXD3P31249 432 aaPredicted RBP4.06□□□□□ -1.76
LINC00342-201ENST00000412393 DUTP33316 252 aaKnown RBP4.06□□□□□ -1.76
LINC00342-201ENST00000412393 TFPI2P48307 235 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 AMTP48728 403 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 CFHR3Q02985 330 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 EGFEM1PQ0D2K5 195 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 RAB31Q13636 194 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 PLGLAQ15195 96 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 POU2AF1Q16633 256 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 IZUMO4Q1ZYL8 232 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 C5orf64Q2M2E5 130 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 DEFB136Q30KP8 78 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 RPL39P5Q59GN2 51 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 DEFB121Q5J5C9 76 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 PQLC2Q6ZP29 291 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 NPBQ8NG41 125 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 C18orf32Q8TCD1 76 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 BORCS7Q96B45 105 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 CHCHD1Q96BP2 118 aaKnown RBP4.06□□□□□ -1.76
LINC00342-201ENST00000412393 DERL1Q9BUN8 251 aa4.06□□□□□ -1.76
LINC00342-201ENST00000412393 GGTLC1Q9BX51 225 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms