RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 SMIM12Q96EX1 92 aa7.56□□□□□ -1.2
LINC01643-201ENST00000412218 SHANK2-AS3Q9BTD1 123 aa7.56□□□□□ -1.2
LINC01643-201ENST00000412218 SLC25A39Q9BZJ4 359 aaPredicted RBP7.56□□□□□ -1.2
LINC01643-201ENST00000412218 STAB2Q8WWQ8 2551 aa7.55□□□□□ -1.2
LINC01643-201ENST00000412218 LOC102724200A0A096LPH7 203 aaPredicted RBP7.55□□□□□ -1.2
LINC01643-201ENST00000412218 TYMSP04818 313 aa7.55□□□□□ -1.2
LINC01643-201ENST00000412218 NBEAP1P0C6P0 100 aa7.55□□□□□ -1.2
LINC01643-201ENST00000412218 HIST1H1EP10412 219 aaKnown RBP7.55□□□□□ -1.2
LINC01643-201ENST00000412218 RPL19P84098 196 aaKnown RBP7.55□□□□□ -1.2
LINC01643-201ENST00000412218 BPIFA4PQ86YQ2 179 aa7.55□□□□□ -1.2
LINC01643-201ENST00000412218 C5orf17Q8NAS9 161 aa7.55□□□□□ -1.2
LINC01643-201ENST00000412218 OCC1Q8TAD7 63 aa7.55□□□□□ -1.2
LINC01643-201ENST00000412218 OTORQ9NRC9 128 aa7.55□□□□□ -1.2
LINC01643-201ENST00000412218 SMPXQ9UHP9 88 aa7.55□□□□□ -1.2
LINC01643-201ENST00000412218 IGHV7-4-1A0A0J9YVY3 117 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 LCE6AA0A183 80 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 A0A1W2PPQ1 181 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 C5orf52A6NGY3 159 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 UBE2CO00762 179 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 CHEK1O14757 476 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 IL4P05112 153 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 SLC25A5P05141 298 aaKnown RBP7.54□□□□□ -1.2
LINC01643-201ENST00000412218 ODF3L2Q3SX64 289 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 ZNF600Q6ZNG1 722 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 IGF2BP2-AS1Q96M15 143 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 ATG101Q9BSB4 218 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 OSTCQ9NRP0 149 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 IL36BQ9NZH7 164 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 EPDR1Q9UM22 224 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 NBEAL2Q6ZNJ1 2754 aa7.54□□□□□ -1.2
LINC01643-201ENST00000412218 PGPEP1LA6NFU8 196 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 OR4C46A6NHA9 309 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 K7EN84 100 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 ISLRO14498 428 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 GCGP01275 180 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 UBE2G1P62253 170 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 TMEM183BQ1AE95 376 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 LYPD1Q8N2G4 141 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 BLNKQ8WV28 456 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 FMC1Q96HJ9 113 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 OVOL2Q9BRP0 275 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 RHPN1-AS1Q9BWJ2 59 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 Q9H3A6 140 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 STARD9Q9P2P6 4700 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 RYR2Q92736 4967 aa7.53□□□□□ -1.2
LINC01643-201ENST00000412218 IGHV3-49A0A0A0MS15 119 aa7.52□□□□□ -1.21
LINC01643-201ENST00000412218 PGPA6NDG6 321 aa7.52□□□□□ -1.21
LINC01643-201ENST00000412218 TRGC2P03986 189 aa7.52□□□□□ -1.21
LINC01643-201ENST00000412218 S100A8P05109 93 aa7.52□□□□□ -1.21
LINC01643-201ENST00000412218 APOC4P55056 127 aa7.52□□□□□ -1.21
LINC01643-201ENST00000412218 ERVFC1-1P60608 527 aa7.52□□□□□ -1.21
LINC01643-201ENST00000412218 SNRPEP62304 92 aaKnown RBP7.52□□□□□ -1.21
LINC01643-201ENST00000412218 RANP62826 216 aaKnown RBP7.52□□□□□ -1.21
LINC01643-201ENST00000412218 PDE6HQ13956 83 aa7.52□□□□□ -1.21
LINC01643-201ENST00000412218 TOMM20LQ6UXN7 152 aa7.52□□□□□ -1.21
LINC01643-201ENST00000412218 FAM231DQ6ZW35 169 aa7.52□□□□□ -1.21
LINC01643-201ENST00000412218 IL17DQ8TAD2 202 aa7.52□□□□□ -1.21
LINC01643-201ENST00000412218 CMTM2Q8TAZ6 248 aa7.52□□□□□ -1.21
LINC01643-201ENST00000412218 ZFAND3Q9H8U3 227 aa7.52□□□□□ -1.21
LINC01643-201ENST00000412218 IGHV3OR16-13A0A075B7E8 117 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 IGHV3-74A0A0B4J1X5 117 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 TRBV6-1A0A0K0K1D8 114 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 ZNF98A6NK75 572 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 IGLV2-8P01709 118 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 MGST1P10620 155 aaKnown RBP7.51□□□□□ -1.21
LINC01643-201ENST00000412218 RPL7P18124 248 aaKnown RBP7.51□□□□□ -1.21
LINC01643-201ENST00000412218 AKR1D1P51857 326 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 FABP9Q0Z7S8 132 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 USF2Q15853 346 aaPredicted RBP7.51□□□□□ -1.21
LINC01643-201ENST00000412218 COX19Q49B96 90 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 IBA57Q5T440 356 aaKnown RBP7.51□□□□□ -1.21
LINC01643-201ENST00000412218 LEMD1Q68G75 181 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 Q6ZWC4 215 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 BAGE2Q86Y30 109 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 ZNF586Q9NXT0 402 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 RABAC1Q9UI14 185 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 TP53TG1Q9Y2A0 90 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 KLF12Q9Y4X4 402 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 V9GYV3 84 aa7.51□□□□□ -1.21
LINC01643-201ENST00000412218 TRBV19A0A075B6N1 114 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 KIR2DL5BA0A0G2JN68 375 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 KIR2DL5BA0A0G2JPC4 375 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 SERTM2A0A1B0GWG4 89 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 K7EQM0 130 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 HIST1H2BKO60814 126 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 APOHP02749 345 aaPredicted RBP7.5□□□□□ -1.21
LINC01643-201ENST00000412218 TCRAP04437 139 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 HIST1H2BJP06899 126 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 IGLC2P0DOY2 106 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 HIST1H2BOP23527 126 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 HIST1H2BBP33778 126 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 BMI1P35226 326 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 TFPI2P48307 235 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 HIST1H2BDP58876 126 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 HIST1H2BCP62807 126 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 HIST2H2BEQ16778 126 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 ACTL10Q5JWF8 245 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.5□□□□□ -1.21
LINC01643-201ENST00000412218 WFDC3Q8IUB2 231 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 APRG1Q8IVJ8 170 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms