RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 MORN3Q6PF18 240 aaPredicted RBP13.81□□□□□ -0.2
CDC42-204ENST00000411827 C2CD4CQ8TF44 421 aa13.81□□□□□ -0.2
CDC42-204ENST00000411827 NDFIP1Q9BT67 221 aa13.81□□□□□ -0.2
CDC42-204ENST00000411827 SLC35B3Q9H1N7 401 aa13.81□□□□□ -0.2
CDC42-204ENST00000411827 ZFP30Q9Y2G7 519 aa13.81□□□□□ -0.2
CDC42-204ENST00000411827 GNG5P63218 68 aa13.8□□□□□ -0.2
CDC42-204ENST00000411827 FLI1Q01543 452 aaPredicted RBP13.8□□□□□ -0.2
CDC42-204ENST00000411827 FAM74A3Q4VXF1 159 aa13.8□□□□□ -0.2
CDC42-204ENST00000411827 TRPT1Q86TN4 253 aaKnown RBP13.8□□□□□ -0.2
CDC42-204ENST00000411827 SMIM12Q96EX1 92 aa13.8□□□□□ -0.2
CDC42-204ENST00000411827 AGPAT4-IT1Q9H0P7 198 aa13.8□□□□□ -0.2
CDC42-204ENST00000411827 RPH3ALQ9UNE2 315 aa13.8□□□□□ -0.2
CDC42-204ENST00000411827 IGKV2-40A0A087WW87 121 aaPredicted RBP13.79□□□□□ -0.2
CDC42-204ENST00000411827 KIR2DL5BA0A0G2JN68 375 aa13.79□□□□□ -0.2
CDC42-204ENST00000411827 KIR2DL5BA0A0G2JPC4 375 aa13.79□□□□□ -0.2
CDC42-204ENST00000411827 SCO2A0A1W2PP80 73 aa13.79□□□□□ -0.2
CDC42-204ENST00000411827 KNCNA6PVL3 124 aa13.79□□□□□ -0.2
CDC42-204ENST00000411827 IGKV2D-40P01614 121 aaPredicted RBP13.79□□□□□ -0.2
CDC42-204ENST00000411827 KIR2DL5AQ8N109 375 aa13.79□□□□□ -0.2
CDC42-204ENST00000411827 DEFB125Q8N687 156 aa13.79□□□□□ -0.2
CDC42-204ENST00000411827 OR4B1Q8NGF8 309 aa13.79□□□□□ -0.2
CDC42-204ENST00000411827 KIR2DL5BQ8NHK3 375 aa13.79□□□□□ -0.2
CDC42-204ENST00000411827 C1QTNF4Q9BXJ3 329 aa13.79□□□□□ -0.2
CDC42-204ENST00000411827 SRD5A3Q9H8P0 318 aa13.79□□□□□ -0.2
CDC42-204ENST00000411827 ZNF492Q9P255 531 aa13.79□□□□□ -0.2
CDC42-204ENST00000411827 F6UB75 175 aa13.78□□□□□ -0.2
CDC42-204ENST00000411827 LEPP41159 167 aa13.78□□□□□ -0.2
CDC42-204ENST00000411827 TREM1Q9NP99 234 aa13.78□□□□□ -0.2
CDC42-204ENST00000411827 PSG8Q9UQ74 426 aa13.78□□□□□ -0.2
CDC42-204ENST00000411827 LOC102724200A0A096LPH7 203 aaPredicted RBP13.77□□□□□ -0.21
CDC42-204ENST00000411827 SRP19P09132 144 aaKnown RBP13.77□□□□□ -0.21
CDC42-204ENST00000411827 CRISP2P16562 243 aa13.77□□□□□ -0.21
CDC42-204ENST00000411827 APOC4P55056 127 aa13.77□□□□□ -0.21
CDC42-204ENST00000411827 GDF5OSQ5U4N7 250 aa13.77□□□□□ -0.21
CDC42-204ENST00000411827 COMMD7Q86VX2 200 aa13.77□□□□□ -0.21
CDC42-204ENST00000411827 VGLL1Q99990 258 aa13.77□□□□□ -0.21
CDC42-204ENST00000411827 UBE2CO00762 179 aa13.76□□□□□ -0.21
CDC42-204ENST00000411827 IGLV2-11P01706 119 aa13.76□□□□□ -0.21
CDC42-204ENST00000411827 IGHV4-30-4P0DP06 118 aa13.76□□□□□ -0.21
CDC42-204ENST00000411827 RPL35P42766 123 aaKnown RBP13.76□□□□□ -0.21
CDC42-204ENST00000411827 BIN3Q9NQY0 253 aa13.76□□□□□ -0.21
CDC42-204ENST00000411827 C9JCJ5 164 aa13.75□□□□□ -0.21
CDC42-204ENST00000411827 LTAP01374 205 aa13.75□□□□□ -0.21
CDC42-204ENST00000411827 CT45A10P0DMU9 189 aa13.75□□□□□ -0.21
CDC42-204ENST00000411827 SOHLH1Q5JUK2 328 aa13.75□□□□□ -0.21
CDC42-204ENST00000411827 COX8CQ7Z4L0 72 aa13.75□□□□□ -0.21
CDC42-204ENST00000411827 FAM19A4Q96LR4 140 aa13.75□□□□□ -0.21
CDC42-204ENST00000411827 CITED4Q96RK1 184 aa13.75□□□□□ -0.21
CDC42-204ENST00000411827 AURKAIP1Q9NWT8 199 aaPredicted RBP13.75□□□□□ -0.21
CDC42-204ENST00000411827 LY96Q9Y6Y9 160 aa13.75□□□□□ -0.21
CDC42-204ENST00000411827 ZNF705DP0CH99 300 aaPredicted RBP13.74□□□□□ -0.21
CDC42-204ENST00000411827 ZNF705BP0CI00 300 aaPredicted RBP13.74□□□□□ -0.21
CDC42-204ENST00000411827 CDKN1BP46527 198 aa13.74□□□□□ -0.21
CDC42-204ENST00000411827 GNG4P50150 75 aa13.74□□□□□ -0.21
CDC42-204ENST00000411827 ERCC8Q13216 396 aa13.74□□□□□ -0.21
CDC42-204ENST00000411827 ZNF124Q15973 351 aa13.74□□□□□ -0.21
CDC42-204ENST00000411827 AMTNQ6UX39 209 aa13.74□□□□□ -0.21
CDC42-204ENST00000411827 PRNTQ86SH4 94 aa13.74□□□□□ -0.21
CDC42-204ENST00000411827 Q86TA4 180 aa13.74□□□□□ -0.21
CDC42-204ENST00000411827 BAGE2Q86Y30 109 aa13.74□□□□□ -0.21
CDC42-204ENST00000411827 C20orf144Q9BQM9 153 aa13.74□□□□□ -0.21
CDC42-204ENST00000411827 CSTL1Q9H114 145 aa13.74□□□□□ -0.21
CDC42-204ENST00000411827 WFDC10AQ9H1F0 79 aa13.74□□□□□ -0.21
CDC42-204ENST00000411827 PARLQ9H300 379 aa13.74□□□□□ -0.21
CDC42-204ENST00000411827 TRAV8-1A0A0A6YYK1 113 aa13.73□□□□□ -0.21
CDC42-204ENST00000411827 DEFB1P60022 68 aa13.73□□□□□ -0.21
CDC42-204ENST00000411827 TMEM183AQ8IXX5 376 aa13.73□□□□□ -0.21
CDC42-204ENST00000411827 LINC00479Q96M42 142 aa13.73□□□□□ -0.21
CDC42-204ENST00000411827 SMIM7Q9BQ49 75 aa13.73□□□□□ -0.21
CDC42-204ENST00000411827 NOTCH1P46531 2555 aa13.72□□□□□ -0.21
CDC42-204ENST00000411827 TRAV34A0A0B4J273 112 aa13.72□□□□□ -0.21
CDC42-204ENST00000411827 ZNF727A8MUV8 499 aa13.72□□□□□ -0.21
CDC42-204ENST00000411827 GPX1P07203 203 aa13.72□□□□□ -0.21
CDC42-204ENST00000411827 SRSF3P84103 164 aaKnown RBP13.72□□□□□ -0.21
CDC42-204ENST00000411827 SMUG1Q53HV7 270 aa13.72□□□□□ -0.21
CDC42-204ENST00000411827 LINC00322Q6ZN03 302 aaPredicted RBP13.72□□□□□ -0.21
CDC42-204ENST00000411827 KLLNB2CW77 178 aa13.71□□□□□ -0.21
CDC42-204ENST00000411827 IGKV3-20P01619 116 aa13.71□□□□□ -0.21
CDC42-204ENST00000411827 CEBPGP53567 150 aa13.71□□□□□ -0.21
CDC42-204ENST00000411827 ASCL2Q99929 193 aa13.71□□□□□ -0.21
CDC42-204ENST00000411827 RBMY1BA6NDE4 496 aaKnown RBP13.7□□□□□ -0.22
CDC42-204ENST00000411827 RBMY1EA6NEQ0 496 aaKnown RBP13.7□□□□□ -0.22
CDC42-204ENST00000411827 C9JQL5 133 aa13.7□□□□□ -0.22
CDC42-204ENST00000411827 SFTA3P0C7M3 94 aa13.7□□□□□ -0.22
CDC42-204ENST00000411827 RBMY1DP0C7P1 496 aaKnown RBP13.7□□□□□ -0.22
CDC42-204ENST00000411827 RPL35AP18077 110 aaKnown RBP13.7□□□□□ -0.22
CDC42-204ENST00000411827 CENPWQ5EE01 88 aa13.7□□□□□ -0.22
CDC42-204ENST00000411827 TMEM256Q8N2U0 113 aa13.7□□□□□ -0.22
CDC42-204ENST00000411827 Q8TAT8 98 aa13.7□□□□□ -0.22
CDC42-204ENST00000411827 IGF2BP2-AS1Q96M15 143 aa13.7□□□□□ -0.22
CDC42-204ENST00000411827 DERL1Q9BUN8 251 aa13.7□□□□□ -0.22
CDC42-204ENST00000411827 MLST8Q9BVC4 326 aa13.7□□□□□ -0.22
CDC42-204ENST00000411827 TMEM218A2RU14 115 aa13.69□□□□□ -0.22
CDC42-204ENST00000411827 INSP01308 110 aa13.69□□□□□ -0.22
CDC42-204ENST00000411827 TMEM241Q24JQ0 296 aa13.69□□□□□ -0.22
CDC42-204ENST00000411827 ZNF674Q2M3X9 581 aa13.69□□□□□ -0.22
CDC42-204ENST00000411827 ZFAND2AQ8N6M9 145 aa13.69□□□□□ -0.22
CDC42-204ENST00000411827 NIPSNAP3BQ9BS92 247 aa13.69□□□□□ -0.22
CDC42-204ENST00000411827 PRKDCP78527 4128 aaKnown RBP13.69□□□□□ -0.22
CDC42-204ENST00000411827 K7EIL1 84 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms