RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 SPART-AS1P0CW21 52 aa22.29■■□□□ 1.16
TRAF3IP1-203ENST00000409739 FAM19A4Q96LR4 140 aa22.29■■□□□ 1.16
TRAF3IP1-203ENST00000409739 ARPC5LQ9BPX5 153 aa22.29■■□□□ 1.16
TRAF3IP1-203ENST00000409739 OTORQ9NRC9 128 aa22.29■■□□□ 1.16
TRAF3IP1-203ENST00000409739 DKK2Q9UBU2 259 aa22.29■■□□□ 1.16
TRAF3IP1-203ENST00000409739 C11orf94C9JXX5 98 aa22.28■■□□□ 1.16
TRAF3IP1-203ENST00000409739 CSN1S1P47710 185 aa22.28■■□□□ 1.16
TRAF3IP1-203ENST00000409739 TAS2R60P59551 318 aa22.28■■□□□ 1.16
TRAF3IP1-203ENST00000409739 FAM222AQ5U5X8 452 aa22.28■■□□□ 1.16
TRAF3IP1-203ENST00000409739 SSX7Q7RTT5 188 aa22.28■■□□□ 1.16
TRAF3IP1-203ENST00000409739 ACTR3CQ9C0K3 210 aaPredicted RBP22.28■■□□□ 1.16
TRAF3IP1-203ENST00000409739 TMEM78Q5T7P6 136 aa22.27■■□□□ 1.16
TRAF3IP1-203ENST00000409739 ST6GAL2Q96JF0 529 aa22.27■■□□□ 1.16
TRAF3IP1-203ENST00000409739 ALMS1Q8TCU4 4167 aa22.26■■□□□ 1.15
TRAF3IP1-203ENST00000409739 H7BYZ3 331 aa22.26■■□□□ 1.15
TRAF3IP1-203ENST00000409739 AZU1P20160 251 aa22.26■■□□□ 1.15
TRAF3IP1-203ENST00000409739 TEX48A0A1B0GUV7 120 aa22.25■■□□□ 1.15
TRAF3IP1-203ENST00000409739 KLLNB2CW77 178 aa22.25■■□□□ 1.15
TRAF3IP1-203ENST00000409739 GCHFRP30047 84 aa22.25■■□□□ 1.15
TRAF3IP1-203ENST00000409739 HYLS1Q96M11 299 aa22.25■■□□□ 1.15
TRAF3IP1-203ENST00000409739 ZNF492Q9P255 531 aa22.25■■□□□ 1.15
TRAF3IP1-203ENST00000409739 RYR3Q15413 4870 aa22.24■■□□□ 1.15
TRAF3IP1-203ENST00000409739 TRAV10A0A0B4J240 114 aa22.24■■□□□ 1.15
TRAF3IP1-203ENST00000409739 TRAV12-3A0A0B4J271 114 aa22.24■■□□□ 1.15
TRAF3IP1-203ENST00000409739 PLAC8L1A1L4L8 177 aa22.24■■□□□ 1.15
TRAF3IP1-203ENST00000409739 RBAKDNA6NC62 111 aa22.24■■□□□ 1.15
TRAF3IP1-203ENST00000409739 PGPA6NDG6 321 aa22.24■■□□□ 1.15
TRAF3IP1-203ENST00000409739 DIRC3C9JPN6 131 aa22.24■■□□□ 1.15
TRAF3IP1-203ENST00000409739 SLC25A5P05141 298 aaKnown RBP22.24■■□□□ 1.15
TRAF3IP1-203ENST00000409739 CRISP2P16562 243 aa22.24■■□□□ 1.15
TRAF3IP1-203ENST00000409739 ZNF726P1Q15940 193 aa22.24■■□□□ 1.15
TRAF3IP1-203ENST00000409739 SUN5Q8TC36 379 aa22.24■■□□□ 1.15
TRAF3IP1-203ENST00000409739 RXFP4Q8TDU9 374 aa22.24■■□□□ 1.15
TRAF3IP1-203ENST00000409739 C2CD4CQ8TF44 421 aa22.24■■□□□ 1.15
TRAF3IP1-203ENST00000409739 A0A0D9SG52 128 aa22.23■■□□□ 1.15
TRAF3IP1-203ENST00000409739 C7orf71A4D174 169 aa22.23■■□□□ 1.15
TRAF3IP1-203ENST00000409739 HTN1P15515 57 aa22.23■■□□□ 1.15
TRAF3IP1-203ENST00000409739 AKR1C8PQ5T2L2 129 aa22.23■■□□□ 1.15
TRAF3IP1-203ENST00000409739 Q8TAT8 98 aa22.23■■□□□ 1.15
TRAF3IP1-203ENST00000409739 CXorf1O96002 111 aa22.22■■□□□ 1.15
TRAF3IP1-203ENST00000409739 BTN1A1Q13410 526 aa22.22■■□□□ 1.15
TRAF3IP1-203ENST00000409739 FAM74A1Q5RGS3 127 aa22.22■■□□□ 1.15
TRAF3IP1-203ENST00000409739 ZFAND2AQ8N6M9 145 aa22.22■■□□□ 1.15
TRAF3IP1-203ENST00000409739 C16orf74Q96GX8 76 aa22.22■■□□□ 1.15
TRAF3IP1-203ENST00000409739 NIPSNAP3BQ9BS92 247 aa22.22■■□□□ 1.15
TRAF3IP1-203ENST00000409739 DNAH1Q9P2D7 4330 aa22.21■■□□□ 1.15
TRAF3IP1-203ENST00000409739 CTXND1A0A1B0GTU2 59 aa22.21■■□□□ 1.15
TRAF3IP1-203ENST00000409739 BCL2L11O43521 198 aa22.21■■□□□ 1.15
TRAF3IP1-203ENST00000409739 ZNF138P52744 262 aa22.21■■□□□ 1.15
TRAF3IP1-203ENST00000409739 CD300CQ08708 224 aa22.21■■□□□ 1.15
TRAF3IP1-203ENST00000409739 CMTM2Q8TAZ6 248 aa22.21■■□□□ 1.15
TRAF3IP1-203ENST00000409739 PLA2G2EQ9NZK7 142 aa22.21■■□□□ 1.15
TRAF3IP1-203ENST00000409739 RPH3ALQ9UNE2 315 aa22.21■■□□□ 1.15
TRAF3IP1-203ENST00000409739 NMBP08949 121 aa22.2■■□□□ 1.14
TRAF3IP1-203ENST00000409739 PRR9Q5T870 116 aa22.2■■□□□ 1.14
TRAF3IP1-203ENST00000409739 TCTE3Q8IZS6 198 aa22.2■■□□□ 1.14
TRAF3IP1-203ENST00000409739 RNASE8Q8TDE3 154 aaKnown RBP22.2■■□□□ 1.14
TRAF3IP1-203ENST00000409739 TMEM263Q8WUH6 116 aaKnown RBP22.2■■□□□ 1.14
TRAF3IP1-203ENST00000409739 DEFB131BA0A096LNP1 70 aa22.19■■□□□ 1.14
TRAF3IP1-203ENST00000409739 KANTRA0A1W2PQU2 76 aa22.19■■□□□ 1.14
TRAF3IP1-203ENST00000409739 TMEM167BQ9NRX6 74 aa22.19■■□□□ 1.14
TRAF3IP1-203ENST00000409739 TRBV7-9A0A0J9YWB2 115 aa22.18■■□□□ 1.14
TRAF3IP1-203ENST00000409739 GPX1P07203 203 aa22.18■■□□□ 1.14
TRAF3IP1-203ENST00000409739 ZNF493Q6ZR52 646 aa22.18■■□□□ 1.14
TRAF3IP1-203ENST00000409739 ARL6IP6Q8N6S5 226 aa22.18■■□□□ 1.14
TRAF3IP1-203ENST00000409739 LINC00476Q8WZB0 136 aa22.18■■□□□ 1.14
TRAF3IP1-203ENST00000409739 ZNF471Q9BX82 626 aaPredicted RBP22.18■■□□□ 1.14
TRAF3IP1-203ENST00000409739 LYRM9A8MSI8 78 aa22.17■■□□□ 1.14
TRAF3IP1-203ENST00000409739 IGLL5B9A064 214 aa22.17■■□□□ 1.14
TRAF3IP1-203ENST00000409739 ZNF324O75467 553 aaPredicted RBP22.17■■□□□ 1.14
TRAF3IP1-203ENST00000409739 RNASE4P34096 147 aaKnown RBP22.17■■□□□ 1.14
TRAF3IP1-203ENST00000409739 GNG5P63218 68 aa22.17■■□□□ 1.14
TRAF3IP1-203ENST00000409739 IQCF2Q8IXL9 164 aa22.17■■□□□ 1.14
TRAF3IP1-203ENST00000409739 PYGO2Q9BRQ0 406 aa22.17■■□□□ 1.14
TRAF3IP1-203ENST00000409739 GOLT1AQ6ZVE7 132 aa22.16■■□□□ 1.14
TRAF3IP1-203ENST00000409739 TMUB2Q71RG4 321 aa22.16■■□□□ 1.14
TRAF3IP1-203ENST00000409739 DAD1P61803 113 aa22.15■■□□□ 1.14
TRAF3IP1-203ENST00000409739 hCG_2014768A0A024R1R8 64 aa22.14■■□□□ 1.13
TRAF3IP1-203ENST00000409739 CCDC28AQ8IWP9 274 aa22.14■■□□□ 1.13
TRAF3IP1-203ENST00000409739 C5orf17Q8NAS9 161 aa22.14■■□□□ 1.13
TRAF3IP1-203ENST00000409739 TMED6Q8WW62 240 aa22.14■■□□□ 1.13
TRAF3IP1-203ENST00000409739 RYR2Q92736 4967 aa22.14■■□□□ 1.13
TRAF3IP1-203ENST00000409739 GGTLC3B5MD39 225 aa22.13■■□□□ 1.13
TRAF3IP1-203ENST00000409739 PFDN1O60925 122 aa22.13■■□□□ 1.13
TRAF3IP1-203ENST00000409739 SEC11BP0C7V7 166 aa22.13■■□□□ 1.13
TRAF3IP1-203ENST00000409739 FGF8P55075 233 aaPredicted RBP22.13■■□□□ 1.13
TRAF3IP1-203ENST00000409739 TIMM8BQ9Y5J9 83 aaPredicted RBP22.13■■□□□ 1.13
TRAF3IP1-203ENST00000409739 LENEPQ9Y5L5 61 aa22.13■■□□□ 1.13
TRAF3IP1-203ENST00000409739 TCTAP57738 103 aa22.12■■□□□ 1.13
TRAF3IP1-203ENST00000409739 Q6ZQT7 251 aa22.12■■□□□ 1.13
TRAF3IP1-203ENST00000409739 TMPRSS5Q9H3S3 457 aa22.12■■□□□ 1.13
TRAF3IP1-203ENST00000409739 APLNQ9ULZ1 77 aa22.12■■□□□ 1.13
TRAF3IP1-203ENST00000409739 IGHV4-4A0A075B6R2 117 aa22.11■■□□□ 1.13
TRAF3IP1-203ENST00000409739 TRAV8-1A0A0A6YYK1 113 aa22.11■■□□□ 1.13
TRAF3IP1-203ENST00000409739 MAP1LC3B2A6NCE7 125 aa22.11■■□□□ 1.13
TRAF3IP1-203ENST00000409739 LINC00467Q9BRT7 94 aa22.11■■□□□ 1.13
TRAF3IP1-203ENST00000409739 MAP1LC3BQ9GZQ8 125 aa22.11■■□□□ 1.13
TRAF3IP1-203ENST00000409739 A0A1W2PRE2 83 aa22.1■■□□□ 1.13
TRAF3IP1-203ENST00000409739 FHITP49789 147 aa22.1■■□□□ 1.13
TRAF3IP1-203ENST00000409739 SUMO1P63165 101 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms