RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 C20orf202A1L168 122 aa8.85□□□□□ -0.99
SNX13-202ENST00000409604 PSG3Q16557 428 aa8.85□□□□□ -0.99
SNX13-202ENST00000409604 WDR73Q6P4I2 378 aa8.85□□□□□ -0.99
SNX13-202ENST00000409604 ZFHX4Q86UP3 3567 aa8.85□□□□□ -0.99
SNX13-202ENST00000409604 IGHV3-16A0A0C4DH30 117 aa8.85□□□□□ -0.99
SNX13-202ENST00000409604 PRB2P02812 416 aaPredicted RBP8.85□□□□□ -0.99
SNX13-202ENST00000409604 ZNF138P52744 262 aa8.85□□□□□ -0.99
SNX13-202ENST00000409604 Q6ZSV7 163 aa8.85□□□□□ -0.99
SNX13-202ENST00000409604 LINC01551Q86U37 167 aa8.85□□□□□ -0.99
SNX13-202ENST00000409604 FAM19A2Q8N3H0 131 aa8.85□□□□□ -0.99
SNX13-202ENST00000409604 FMC1Q96HJ9 113 aa8.85□□□□□ -0.99
SNX13-202ENST00000409604 PRO1933Q9H354 126 aa8.85□□□□□ -0.99
SNX13-202ENST00000409604 ZMAT5Q9UDW3 170 aaKnown RBP8.85□□□□□ -0.99
SNX13-202ENST00000409604 ZNF502Q8TBZ5 544 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 TXN2Q99757 166 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 GOLT1BQ9Y3E0 138 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 A0A1B0GUT8 65 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 A0A1B0GW64 132 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 PRR20EP86478 221 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 PRR20CP86479 221 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 PRR20DP86480 221 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 PRR20BP86481 221 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 PRR20AP86496 221 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 TMEM136Q6ZRR5 245 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 ATOH7Q8N100 152 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 TRBV19A0A075B6N1 114 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 DEFB4AO15263 64 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 ADCYAP1P18509 176 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 LRRC75A-AS1Q8N1F1 130 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 GPR61Q9BZJ8 451 aa8.84□□□□□ -0.99
SNX13-202ENST00000409604 TSSC4Q9Y5U2 329 aaPredicted RBP8.84□□□□□ -0.99
SNX13-202ENST00000409604 NDUFA3O95167 84 aa8.83□□□□□ -1
SNX13-202ENST00000409604 NDUFA4O00483 81 aa8.83□□□□□ -1
SNX13-202ENST00000409604 CD5P06127 495 aa8.83□□□□□ -1
SNX13-202ENST00000409604 LGALS1P09382 135 aaKnown RBP8.83□□□□□ -1
SNX13-202ENST00000409604 TRGC1P0CF51 173 aa8.83□□□□□ -1
SNX13-202ENST00000409604 DLX4Q92988 240 aaPredicted RBP8.83□□□□□ -1
SNX13-202ENST00000409604 IGHV7-4-1A0A0J9YVY3 117 aa8.83□□□□□ -1
SNX13-202ENST00000409604 FAM209BQ5JX69 171 aa8.83□□□□□ -1
SNX13-202ENST00000409604 TET2Q6N021 2002 aaPredicted RBP8.83□□□□□ -1
SNX13-202ENST00000409604 C9orf139Q6ZV77 190 aa8.83□□□□□ -1
SNX13-202ENST00000409604 SYT8Q8NBV8 401 aa8.83□□□□□ -1
SNX13-202ENST00000409604 PMCHL2Q9BQD1 86 aa8.83□□□□□ -1
SNX13-202ENST00000409604 SRSF8Q9BRL6 282 aaKnown RBP8.83□□□□□ -1
SNX13-202ENST00000409604 SMKR1H3BMG3 65 aa8.82□□□□□ -1
SNX13-202ENST00000409604 Q6YL49 198 aa8.82□□□□□ -1
SNX13-202ENST00000409604 REC114Q7Z4M0 266 aa8.82□□□□□ -1
SNX13-202ENST00000409604 C14orf178Q8N769 122 aaPredicted RBP8.82□□□□□ -1
SNX13-202ENST00000409604 ESM1Q9NQ30 184 aa8.82□□□□□ -1
SNX13-202ENST00000409604 CD5LO43866 347 aa8.82□□□□□ -1
SNX13-202ENST00000409604 TAS2R60P59551 318 aa8.82□□□□□ -1
SNX13-202ENST00000409604 IQCJQ1A5X6 159 aa8.82□□□□□ -1
SNX13-202ENST00000409604 WIPF2Q8TF74 440 aaPredicted RBP8.82□□□□□ -1
SNX13-202ENST00000409604 LINC00574Q9H8X3 128 aa8.82□□□□□ -1
SNX13-202ENST00000409604 SMPXQ9UHP9 88 aa8.82□□□□□ -1
SNX13-202ENST00000409604 TRAV21A0A0B4J279 112 aa8.82□□□□□ -1
SNX13-202ENST00000409604 LY6LH3BQJ8 138 aa8.82□□□□□ -1
SNX13-202ENST00000409604 ZNF48Q96MX3 618 aaPredicted RBP8.82□□□□□ -1
SNX13-202ENST00000409604 ASH1LQ9NR48 2969 aaKnown RBP8.82□□□□□ -1
SNX13-202ENST00000409604 PRAC2D3DTV9 90 aa8.82□□□□□ -1
SNX13-202ENST00000409604 SH2D1AO60880 128 aa8.82□□□□□ -1
SNX13-202ENST00000409604 HBBP68871 147 aa8.82□□□□□ -1
SNX13-202ENST00000409604 LYZL1Q6UWQ5 148 aa8.82□□□□□ -1
SNX13-202ENST00000409604 LSM4Q9Y4Z0 139 aaKnown RBP8.82□□□□□ -1
SNX13-202ENST00000409604 IGKV3D-20A0A0C4DH25 116 aa8.81□□□□□ -1
SNX13-202ENST00000409604 ZNF124Q15973 351 aa8.81□□□□□ -1
SNX13-202ENST00000409604 FAM90A2PQ658T7 463 aa8.81□□□□□ -1
SNX13-202ENST00000409604 FXYD5Q96DB9 178 aa8.81□□□□□ -1
SNX13-202ENST00000409604 IL36BQ9NZH7 164 aa8.81□□□□□ -1
SNX13-202ENST00000409604 PMCHL1Q16048 86 aa8.81□□□□□ -1
SNX13-202ENST00000409604 CD300EQ496F6 205 aaPredicted RBP8.81□□□□□ -1
SNX13-202ENST00000409604 TMEM61Q8N0U2 210 aa8.81□□□□□ -1
SNX13-202ENST00000409604 CCDC140Q96MF4 163 aa8.81□□□□□ -1
SNX13-202ENST00000409604 FOXC2Q99958 501 aa8.81□□□□□ -1
SNX13-202ENST00000409604 DUSP14O95147 198 aaKnown RBP8.81□□□□□ -1
SNX13-202ENST00000409604 CXCL1P09341 107 aa8.81□□□□□ -1
SNX13-202ENST00000409604 AMMECR1LQ6DCA0 310 aa8.81□□□□□ -1
SNX13-202ENST00000409604 PRSS57Q6UWY2 283 aa8.81□□□□□ -1
SNX13-202ENST00000409604 MS4A6AQ9H2W1 248 aa8.81□□□□□ -1
SNX13-202ENST00000409604 A0A096LPF7 62 aa8.8□□□□□ -1
SNX13-202ENST00000409604 TRGV4A0A0C4DH28 118 aa8.8□□□□□ -1
SNX13-202ENST00000409604 CLPSL1A2RUU4 121 aa8.8□□□□□ -1
SNX13-202ENST00000409604 NUDT3O95989 172 aa8.8□□□□□ -1
SNX13-202ENST00000409604 FOXL1Q12952 345 aa8.8□□□□□ -1
SNX13-202ENST00000409604 H3BRN7 92 aa8.8□□□□□ -1
SNX13-202ENST00000409604 KCNS1Q96KK3 526 aa8.8□□□□□ -1
SNX13-202ENST00000409604 FOXE3Q13461 319 aa8.8□□□□□ -1
SNX13-202ENST00000409604 MEGF9Q9H1U4 602 aa8.8□□□□□ -1
SNX13-202ENST00000409604 SMG1Q96Q15 3661 aaKnown RBP8.79□□□□□ -1
SNX13-202ENST00000409604 ARMS2P0C7Q2 107 aa8.79□□□□□ -1
SNX13-202ENST00000409604 OR9G4Q8NGQ1 327 aa8.79□□□□□ -1
SNX13-202ENST00000409604 RCHY1Q96PM5 261 aa8.79□□□□□ -1
SNX13-202ENST00000409604 ZFP30Q9Y2G7 519 aa8.79□□□□□ -1
SNX13-202ENST00000409604 EDN2P20800 178 aa8.79□□□□□ -1
SNX13-202ENST00000409604 Q6ZN92 141 aa8.79□□□□□ -1
SNX13-202ENST00000409604 ZNF414Q96IQ9 312 aa8.79□□□□□ -1
SNX13-202ENST00000409604 CELSR2Q9HCU4 2923 aa8.79□□□□□ -1
SNX13-202ENST00000409604 DIRC3C9JPN6 131 aa8.79□□□□□ -1
SNX13-202ENST00000409604 LINC01006Q8NI28 216 aa8.79□□□□□ -1
SNX13-202ENST00000409604 TRAV1-1A0A0B4J248 108 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms