RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 C5orf56Q8N8D9 126 aa11.79□□□□□ -0.52
SCAMP4-202ENST00000409472 C10orf105Q8TEF2 133 aa11.79□□□□□ -0.52
SCAMP4-202ENST00000409472 CCDC140Q96MF4 163 aa11.79□□□□□ -0.52
SCAMP4-202ENST00000409472 ZNF331Q9NQX6 463 aaPredicted RBP11.79□□□□□ -0.52
SCAMP4-202ENST00000409472 A0A1B0GXF2 115 aa11.79□□□□□ -0.52
SCAMP4-202ENST00000409472 HLA-DMBP28068 263 aa11.79□□□□□ -0.52
SCAMP4-202ENST00000409472 UFSP1Q6NVU6 142 aa11.79□□□□□ -0.52
SCAMP4-202ENST00000409472 CFAP161Q6P656 301 aa11.79□□□□□ -0.52
SCAMP4-202ENST00000409472 C18orf32Q8TCD1 76 aa11.79□□□□□ -0.52
SCAMP4-202ENST00000409472 PIFOQ8TCI5 191 aa11.79□□□□□ -0.52
SCAMP4-202ENST00000409472 PGLYRP4Q96LB8 373 aa11.79□□□□□ -0.52
SCAMP4-202ENST00000409472 PIMREGQ9BSJ6 248 aa11.79□□□□□ -0.52
SCAMP4-202ENST00000409472 THYN1Q9P016 225 aa11.79□□□□□ -0.52
SCAMP4-202ENST00000409472 C7orf71A4D174 169 aa11.78□□□□□ -0.52
SCAMP4-202ENST00000409472 OR4C46A6NHA9 309 aa11.78□□□□□ -0.52
SCAMP4-202ENST00000409472 ZNF502Q8TBZ5 544 aa11.78□□□□□ -0.52
SCAMP4-202ENST00000409472 WIPF2Q8TF74 440 aaPredicted RBP11.78□□□□□ -0.52
SCAMP4-202ENST00000409472 C8orf49Q96NF6 230 aa11.78□□□□□ -0.52
SCAMP4-202ENST00000409472 ZNF492Q9P255 531 aa11.78□□□□□ -0.52
SCAMP4-202ENST00000409472 SMAD5-AS1Q9Y6J3 95 aa11.78□□□□□ -0.52
SCAMP4-202ENST00000409472 UBR5O95071 2799 aaPredicted RBP11.78□□□□□ -0.52
SCAMP4-202ENST00000409472 ATP5J2P56134 94 aa11.78□□□□□ -0.52
SCAMP4-202ENST00000409472 USP9YO00507 2555 aaPredicted RBP11.78□□□□□ -0.52
SCAMP4-202ENST00000409472 IGHV3-66A0A0C4DH42 116 aa11.77□□□□□ -0.52
SCAMP4-202ENST00000409472 C2orf70A6NJV1 201 aa11.77□□□□□ -0.52
SCAMP4-202ENST00000409472 CRIP1P50238 77 aa11.77□□□□□ -0.52
SCAMP4-202ENST00000409472 SEC11AP67812 179 aa11.77□□□□□ -0.52
SCAMP4-202ENST00000409472 BBC3Q96PG8 261 aaPredicted RBP11.77□□□□□ -0.52
SCAMP4-202ENST00000409472 ANKRD17O75179 2603 aaKnown RBP11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 IGHV3OR16-13A0A075B7E8 117 aa11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 IGKV2-40A0A087WW87 121 aaPredicted RBP11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 IGHV3-74A0A0B4J1X5 117 aa11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 IGHV1-69DA0A0B4J2H0 117 aa11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 NPIPB6E9PJ23 425 aa11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 IGKV2D-40P01614 121 aaPredicted RBP11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 IGHV1-69P01742 117 aa11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 CLEC3BP05452 202 aa11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 COL8A1P27658 744 aa11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 FAM162BQ5T6X4 162 aa11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 NEGR1Q7Z3B1 354 aa11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 TMEM75Q8N9X5 138 aa11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 ATP6V0BQ99437 205 aa11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 ZFAND3Q9H8U3 227 aa11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 PSG8Q9UQ74 426 aa11.77□□□□□ -0.53
SCAMP4-202ENST00000409472 RASL11AQ6T310 242 aa11.76□□□□□ -0.53
SCAMP4-202ENST00000409472 CLEC19AQ6UXS0 136 aa11.76□□□□□ -0.53
SCAMP4-202ENST00000409472 A6NJY4 79 aa11.76□□□□□ -0.53
SCAMP4-202ENST00000409472 CRXO43186 299 aaPredicted RBP11.76□□□□□ -0.53
SCAMP4-202ENST00000409472 IGHG4P01861 327 aa11.76□□□□□ -0.53
SCAMP4-202ENST00000409472 CSPG4Q6UVK1 2322 aa11.76□□□□□ -0.53
SCAMP4-202ENST00000409472 IGHV3-49A0A0A0MS15 119 aa11.75□□□□□ -0.53
SCAMP4-202ENST00000409472 KLF5Q13887 457 aaPredicted RBP11.75□□□□□ -0.53
SCAMP4-202ENST00000409472 LY6EQ16553 131 aa11.75□□□□□ -0.53
SCAMP4-202ENST00000409472 DAZAP1Q96EP5 407 aaKnown RBP11.75□□□□□ -0.53
SCAMP4-202ENST00000409472 TMEM191AQ9H0A3 160 aa11.75□□□□□ -0.53
SCAMP4-202ENST00000409472 RABAC1Q9UI14 185 aa11.75□□□□□ -0.53
SCAMP4-202ENST00000409472 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.75□□□□□ -0.536e-10■■■□□ 18.4
SCAMP4-202ENST00000409472 A8MWL6 223 aa11.75□□□□□ -0.53
SCAMP4-202ENST00000409472 K7EP34 96 aa11.75□□□□□ -0.53
SCAMP4-202ENST00000409472 RNASEKQ6P5S7 137 aaKnown RBP11.75□□□□□ -0.53
SCAMP4-202ENST00000409472 Q8TAT8 98 aa11.75□□□□□ -0.53
SCAMP4-202ENST00000409472 CLPSL1A2RUU4 121 aa11.74□□□□□ -0.53
SCAMP4-202ENST00000409472 ZNF207O43670 478 aaKnown RBP11.74□□□□□ -0.53
SCAMP4-202ENST00000409472 APOHP02749 345 aaPredicted RBP11.74□□□□□ -0.53
SCAMP4-202ENST00000409472 CT83Q5H943 113 aa11.74□□□□□ -0.53
SCAMP4-202ENST00000409472 LYPD1Q8N2G4 141 aa11.74□□□□□ -0.53
SCAMP4-202ENST00000409472 SIGMAR1Q99720 223 aa11.74□□□□□ -0.53
SCAMP4-202ENST00000409472 PMCHL2Q9BQD1 86 aa11.74□□□□□ -0.53
SCAMP4-202ENST00000409472 MS4A6AQ9H2W1 248 aa11.74□□□□□ -0.53
SCAMP4-202ENST00000409472 FAM231BA6NCW3 169 aa11.74□□□□□ -0.53
SCAMP4-202ENST00000409472 AVPP01185 164 aa11.74□□□□□ -0.53
SCAMP4-202ENST00000409472 HBBP68871 147 aa11.74□□□□□ -0.53
SCAMP4-202ENST00000409472 OR5A1Q8NGJ0 315 aa11.74□□□□□ -0.53
SCAMP4-202ENST00000409472 SCRT2Q9NQ03 307 aa11.74□□□□□ -0.53
SCAMP4-202ENST00000409472 ABCA12Q86UK0 2595 aa11.73□□□□□ -0.53
SCAMP4-202ENST00000409472 TRBV6-1A0A0K0K1D8 114 aa11.73□□□□□ -0.53
SCAMP4-202ENST00000409472 FOXA3P55318 350 aaPredicted RBP11.73□□□□□ -0.53
SCAMP4-202ENST00000409472 PDE6HQ13956 83 aa11.73□□□□□ -0.53
SCAMP4-202ENST00000409472 WFDC12Q8WWY7 111 aa11.73□□□□□ -0.53
SCAMP4-202ENST00000409472 MOB4Q9Y3A3 225 aa11.73□□□□□ -0.53
SCAMP4-202ENST00000409472 A6NDN8 102 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 C9orf118A6NHY6 69 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 GOSR1O95249 250 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 AZU1P20160 251 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 RBPMS2Q6ZRY4 209 aaKnown RBP11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 AAMDCQ9H7C9 122 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 TP73-AS1Q9UF72 201 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 CHD6Q8TD26 2715 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 CHEK1O14757 476 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 RPL7P18124 248 aaKnown RBP11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 KLK9Q2XQG4 91 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 C19orf54Q5BKX5 351 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 Q6ZS46 218 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 ATP5L2Q7Z4Y8 100 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 RNF182Q8N6D2 247 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 VGLL1Q99990 258 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 KLK9Q9UKQ9 250 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 PTPN13Q12923 2485 aa11.72□□□□□ -0.53
SCAMP4-202ENST00000409472 hDV102S1A0JD36 115 aa11.71□□□□□ -0.53
SCAMP4-202ENST00000409472 H3BRM9 83 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 190.2 ms