RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 C21orf62-AS1Q17RA5 79 aa19.93■□□□□ 0.78
SPIRE1-202ENST00000409402 PRSS46E5RG02 174 aa19.93■□□□□ 0.78
SPIRE1-202ENST00000409402 I3L3M4 83 aa19.92■□□□□ 0.78
SPIRE1-202ENST00000409402 INS-IGF2F8WCM5 200 aa19.92■□□□□ 0.78
SPIRE1-202ENST00000409402 KIAA2026Q5HYC2 2103 aa19.92■□□□□ 0.78
SPIRE1-202ENST00000409402 DOPEY2Q9Y3R5 2298 aa19.92■□□□□ 0.78
SPIRE1-202ENST00000409402 ZNF407Q9C0G0 2248 aa19.92■□□□□ 0.78
SPIRE1-202ENST00000409402 COLCA2A8K830 154 aa19.92■□□□□ 0.78
SPIRE1-202ENST00000409402 HIST3H2BBQ8N257 126 aa19.92■□□□□ 0.78
SPIRE1-202ENST00000409402 CTSZQ9UBR2 303 aa19.92■□□□□ 0.78
SPIRE1-202ENST00000409402 LAMTOR3Q9UHA4 124 aa19.92■□□□□ 0.78
SPIRE1-202ENST00000409402 IGHV4-61A0A0C4DH41 118 aa19.92■□□□□ 0.78
SPIRE1-202ENST00000409402 RMI2Q96E14 147 aa19.92■□□□□ 0.78
SPIRE1-202ENST00000409402 YLPM1P49750 1951 aaKnown RBP19.92■□□□□ 0.78
SPIRE1-202ENST00000409402 UBE2CO00762 179 aa19.91■□□□□ 0.78
SPIRE1-202ENST00000409402 IGKV1-39P01597 117 aa19.91■□□□□ 0.78
SPIRE1-202ENST00000409402 IGKV1D-39P04432 117 aa19.91■□□□□ 0.78
SPIRE1-202ENST00000409402 FAM231BA6NCW3 169 aa19.91■□□□□ 0.78
SPIRE1-202ENST00000409402 NDUFAF3Q9BU61 184 aa19.9■□□□□ 0.78
SPIRE1-202ENST00000409402 IGHV4-30-2A0A087WSY4 118 aa19.9■□□□□ 0.78
SPIRE1-202ENST00000409402 GUSBP1Q15486 140 aa19.9■□□□□ 0.78
SPIRE1-202ENST00000409402 ANXA2RQ3ZCQ2 193 aa19.9■□□□□ 0.78
SPIRE1-202ENST00000409402 TMEM213A2RRL7 107 aa19.9■□□□□ 0.78
SPIRE1-202ENST00000409402 CCL24O00175 119 aa19.89■□□□□ 0.77
SPIRE1-202ENST00000409402 IGLV3-1P01715 115 aa19.89■□□□□ 0.77
SPIRE1-202ENST00000409402 CT83Q5H943 113 aa19.89■□□□□ 0.77
SPIRE1-202ENST00000409402 TP53TG1Q9Y2A0 90 aa19.89■□□□□ 0.77
SPIRE1-202ENST00000409402 ZNRF2Q8NHG8 242 aa19.88■□□□□ 0.77
SPIRE1-202ENST00000409402 NUP210Q8TEM1 1887 aaPredicted RBP19.88■□□□□ 0.77
SPIRE1-202ENST00000409402 PRR25Q96S07 402 aa19.88■□□□□ 0.77
SPIRE1-202ENST00000409402 TMEM243Q9BU79 118 aa19.88■□□□□ 0.77
SPIRE1-202ENST00000409402 ATP6V0BQ99437 205 aa19.88■□□□□ 0.77
SPIRE1-202ENST00000409402 HAPLN4Q86UW8 402 aa19.88■□□□□ 0.77
SPIRE1-202ENST00000409402 DOCK7Q96N67 2140 aa19.88■□□□□ 0.77
SPIRE1-202ENST00000409402 TRAV8-4A0A0B4J246 113 aa19.87■□□□□ 0.77
SPIRE1-202ENST00000409402 OVOL2Q9BRP0 275 aa19.87■□□□□ 0.77
SPIRE1-202ENST00000409402 LGALS1P09382 135 aaKnown RBP19.87■□□□□ 0.77
SPIRE1-202ENST00000409402 OR11H6Q8NGC7 330 aa19.87■□□□□ 0.77
SPIRE1-202ENST00000409402 IGLC1P0CG04 106 aa19.87■□□□□ 0.77
SPIRE1-202ENST00000409402 ADORA2A-AS1P86434 159 aa19.87■□□□□ 0.77
SPIRE1-202ENST00000409402 SAMD5Q5TGI4 173 aa19.87■□□□□ 0.77
SPIRE1-202ENST00000409402 TMEM141Q96I45 108 aa19.87■□□□□ 0.77
SPIRE1-202ENST00000409402 BCL6BQ8N143 479 aaPredicted RBP19.87■□□□□ 0.77
SPIRE1-202ENST00000409402 THAP8Q8NA92 274 aa19.87■□□□□ 0.77
SPIRE1-202ENST00000409402 SYS1-DBNDD2H3BUS1 97 aa19.87■□□□□ 0.77
SPIRE1-202ENST00000409402 VWC2Q2TAL6 325 aa19.86■□□□□ 0.77
SPIRE1-202ENST00000409402 NBASA2RRP1 2371 aa19.86■□□□□ 0.77
SPIRE1-202ENST00000409402 HOXD3P31249 432 aaPredicted RBP19.86■□□□□ 0.77
SPIRE1-202ENST00000409402 ZC2HC1BQ5TFG8 222 aa19.86■□□□□ 0.77
SPIRE1-202ENST00000409402 MRAPQ8TCY5 172 aa19.85■□□□□ 0.77
SPIRE1-202ENST00000409402 TMEM256Q8N2U0 113 aa19.85■□□□□ 0.77
SPIRE1-202ENST00000409402 ANAPC1Q9H1A4 1944 aa19.85■□□□□ 0.77
SPIRE1-202ENST00000409402 RSPO3Q9BXY4 272 aaPredicted RBP19.85■□□□□ 0.77
SPIRE1-202ENST00000409402 FOXI2Q6ZQN5 318 aa19.85■□□□□ 0.77
SPIRE1-202ENST00000409402 DKK4Q9UBT3 224 aa19.85■□□□□ 0.77
SPIRE1-202ENST00000409402 C9orf66Q5T8R8 295 aa19.84■□□□□ 0.77
SPIRE1-202ENST00000409402 CENPVL3A0A0U1RRI6 287 aa19.84■□□□□ 0.77
SPIRE1-202ENST00000409402 A0A1B0GUS0 222 aa19.84■□□□□ 0.77
SPIRE1-202ENST00000409402 POU2AF1Q16633 256 aa19.84■□□□□ 0.77
SPIRE1-202ENST00000409402 FAM104BQ5XKR9 115 aa19.84■□□□□ 0.77
SPIRE1-202ENST00000409402 hDV102S1A0JD36 115 aa19.84■□□□□ 0.77
SPIRE1-202ENST00000409402 CGB3P0DN86 165 aa19.84■□□□□ 0.77
SPIRE1-202ENST00000409402 C11orf53Q8IXP5 236 aa19.84■□□□□ 0.77
SPIRE1-202ENST00000409402 GAGE6Q13070 117 aa19.83■□□□□ 0.77
SPIRE1-202ENST00000409402 FOXE3Q13461 319 aa19.83■□□□□ 0.77
SPIRE1-202ENST00000409402 C3orf79P0CE67 100 aa19.83■□□□□ 0.76
SPIRE1-202ENST00000409402 SLAQ13239 276 aa19.83■□□□□ 0.76
SPIRE1-202ENST00000409402 C10orf105Q8TEF2 133 aa19.83■□□□□ 0.76
SPIRE1-202ENST00000409402 IGHV4-38-2P0DP08 117 aa19.82■□□□□ 0.76
SPIRE1-202ENST00000409402 DAZAP2Q15038 168 aaPredicted RBP19.82■□□□□ 0.76
SPIRE1-202ENST00000409402 Q8N8P6 123 aa19.82■□□□□ 0.76
SPIRE1-202ENST00000409402 C2orf66Q6UXQ4 117 aa19.82■□□□□ 0.76
SPIRE1-202ENST00000409402 HELZP42694 1942 aaKnown RBP19.82■□□□□ 0.76
SPIRE1-202ENST00000409402 SDHAF1A6NFY7 115 aa19.82■□□□□ 0.76
SPIRE1-202ENST00000409402 ESDP10768 282 aa19.82■□□□□ 0.76
SPIRE1-202ENST00000409402 CACNA1HO95180 2353 aa19.82■□□□□ 0.76
SPIRE1-202ENST00000409402 IGF2BP2-AS1Q96M15 143 aa19.81■□□□□ 0.76
SPIRE1-202ENST00000409402 NKAPP1Q8N9T2 125 aa19.8■□□□□ 0.76
SPIRE1-202ENST00000409402 CHAC1Q9BUX1 264 aa19.8■□□□□ 0.76
SPIRE1-202ENST00000409402 IGHV3-38A0A0C4DH36 116 aa19.8■□□□□ 0.76
SPIRE1-202ENST00000409402 LHBP01229 141 aa19.8■□□□□ 0.76
SPIRE1-202ENST00000409402 A0A1B0GV72 72 aa19.8■□□□□ 0.76
SPIRE1-202ENST00000409402 KLF12Q9Y4X4 402 aa19.79■□□□□ 0.76
SPIRE1-202ENST00000409402 PMVKQ15126 192 aa19.79■□□□□ 0.76
SPIRE1-202ENST00000409402 ZNF491Q8N8L2 437 aa19.79■□□□□ 0.76
SPIRE1-202ENST00000409402 DEFB136Q30KP8 78 aa19.78■□□□□ 0.76
SPIRE1-202ENST00000409402 DLX4Q92988 240 aaPredicted RBP19.78■□□□□ 0.76
SPIRE1-202ENST00000409402 RNF138Q8WVD3 245 aa19.78■□□□□ 0.76
SPIRE1-202ENST00000409402 VOPP1Q96AW1 172 aa19.78■□□□□ 0.76
SPIRE1-202ENST00000409402 SPTAN1Q13813 2472 aaKnown RBP19.78■□□□□ 0.76
SPIRE1-202ENST00000409402 SRSF2Q01130 221 aaKnown RBP19.78■□□□□ 0.76
SPIRE1-202ENST00000409402 SPRNQ5BIV9 151 aa19.78■□□□□ 0.76
SPIRE1-202ENST00000409402 CADP27708 2225 aa19.77■□□□□ 0.76
SPIRE1-202ENST00000409402 MEGF9Q9H1U4 602 aa19.77■□□□□ 0.76
SPIRE1-202ENST00000409402 ZNF114Q8NC26 417 aa19.77■□□□□ 0.76
SPIRE1-202ENST00000409402 CYYR1Q96J86 154 aa19.77■□□□□ 0.76
SPIRE1-202ENST00000409402 NOTCH4Q99466 2003 aa19.77■□□□□ 0.75
SPIRE1-202ENST00000409402 ZNF625Q96I27 306 aaPredicted RBP19.77■□□□□ 0.75
SPIRE1-202ENST00000409402 MYLKQ15746 1914 aa19.76■□□□□ 0.75
SPIRE1-202ENST00000409402 NEGR1Q7Z3B1 354 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms