RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 MZT1Q08AG7 82 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 CHAC1Q9BUX1 264 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 NCOR1P1Q9H4R4 102 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 HIF1ANQ9NWT6 349 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 MSRB1Q9NZV6 116 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 SPRY2O43597 315 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 BMI1P35226 326 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 KLRB1Q12918 225 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 ATP6V0BQ99437 205 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 RASL11BQ9BPW5 248 aa10.28□□□□□ -0.76
PTPRN-202ENST00000409251 CHTOPQ9Y3Y2 248 aaKnown RBP10.28□□□□□ -0.76
PTPRN-202ENST00000409251 IGKV2-40A0A087WW87 121 aaPredicted RBP10.27□□□□□ -0.76
PTPRN-202ENST00000409251 IGKV2D-40P01614 121 aaPredicted RBP10.27□□□□□ -0.76
PTPRN-202ENST00000409251 HBDP02042 147 aa10.27□□□□□ -0.76
PTPRN-202ENST00000409251 Q86TA4 180 aa10.27□□□□□ -0.76
PTPRN-202ENST00000409251 OR5A1Q8NGJ0 315 aa10.27□□□□□ -0.76
PTPRN-202ENST00000409251 GAFA1Q96PS6 74 aa10.27□□□□□ -0.76
PTPRN-202ENST00000409251 IGLV3-9A0A075B6K5 115 aa10.27□□□□□ -0.77
PTPRN-202ENST00000409251 A0A1W2PPI3 338 aa10.27□□□□□ -0.77
PTPRN-202ENST00000409251 NPYP01303 97 aa10.27□□□□□ -0.77
PTPRN-202ENST00000409251 ORMDL3Q8N138 153 aa10.27□□□□□ -0.77
PTPRN-202ENST00000409251 DDB2Q92466 427 aa10.27□□□□□ -0.77
PTPRN-202ENST00000409251 APOMO95445 188 aa10.27□□□□□ -0.77
PTPRN-202ENST00000409251 PRB1P04280 392 aa10.27□□□□□ -0.77
PTPRN-202ENST00000409251 FMC1Q96HJ9 113 aa10.27□□□□□ -0.77
PTPRN-202ENST00000409251 C20orf78Q9BR46 151 aa10.27□□□□□ -0.77
PTPRN-202ENST00000409251 IGHV3-66A0A0C4DH42 116 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 IL4P05112 153 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 CRYBA4P53673 196 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 TMEM133Q9H2Q1 129 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 CYSLTR1Q9Y271 337 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 IGHV3-49A0A0A0MS15 119 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 TRAV40A0A0B4J280 105 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 VSTM5A8MXK1 200 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 SHISA9B4DS77 424 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 GAS8-AS1O95177 125 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 HES1Q14469 280 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 UFSP1Q6NVU6 142 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 VKORC1Q9BQB6 163 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 NGBQ9NPG2 151 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 NPIPB6E9PJ23 425 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 CRXO43186 299 aaPredicted RBP10.26□□□□□ -0.77
PTPRN-202ENST00000409251 GNLYP22749 145 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 VMA21Q3ZAQ7 101 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 PTH2Q96A98 100 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 ZNF714Q96N38 554 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 NDFIP1Q9BT67 221 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 FBXL15Q9H469 300 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 GEMIN7Q9H840 131 aaKnown RBP10.26□□□□□ -0.77
PTPRN-202ENST00000409251 PSG8Q9UQ74 426 aa10.26□□□□□ -0.77
PTPRN-202ENST00000409251 FAM90A9PA6NNJ1 464 aa10.25□□□□□ -0.77
PTPRN-202ENST00000409251 ADORA2A-AS1P86434 159 aa10.25□□□□□ -0.77
PTPRN-202ENST00000409251 STXBP6Q8NFX7 210 aa10.25□□□□□ -0.77
PTPRN-202ENST00000409251 VGLL1Q99990 258 aa10.25□□□□□ -0.77
PTPRN-202ENST00000409251 ZFHX3Q15911 3703 aa10.25□□□□□ -0.77
PTPRN-202ENST00000409251 SCGB1D4Q6XE38 83 aa10.25□□□□□ -0.77
PTPRN-202ENST00000409251 RPL27AP46776 148 aaKnown RBP10.25□□□□□ -0.77
PTPRN-202ENST00000409251 GLMPQ8WWB7 406 aa10.25□□□□□ -0.77
PTPRN-202ENST00000409251 CACNG8Q8WXS5 425 aa10.25□□□□□ -0.77
PTPRN-202ENST00000409251 CTSZQ9UBR2 303 aa10.25□□□□□ -0.77
PTPRN-202ENST00000409251 SS18L2Q9UHA2 77 aa10.25□□□□□ -0.77
PTPRN-202ENST00000409251 PSMB11A5LHX3 300 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 NDUFB3O43676 98 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 EMP1P54849 157 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 CD300EQ496F6 205 aaPredicted RBP10.24□□□□□ -0.77
PTPRN-202ENST00000409251 OR4C13Q8NGP0 309 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 UBTD1Q9HAC8 227 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 NACAE9PAV3 2078 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 NAV2Q8IVL1 2488 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 PSMB2P49721 201 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 GAGE13Q4V321 117 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 CCDC144NLQ6NUI1 221 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 SYT8Q8NBV8 401 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 OR4X2Q8NGF9 303 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 SPAG8Q99932 426 aaPredicted RBP10.24□□□□□ -0.77
PTPRN-202ENST00000409251 TRAV26-2A0A0B4J265 109 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 FCN3O75636 299 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 SRSF9Q13242 221 aaKnown RBP eCLIP10.24□□□□□ -0.77
PTPRN-202ENST00000409251 NDUFA4L2Q9NRX3 87 aa10.24□□□□□ -0.77
PTPRN-202ENST00000409251 ZANQ9Y493 2812 aa10.23□□□□□ -0.77
PTPRN-202ENST00000409251 IGKV1D-37A0A075B6S9 117 aa10.23□□□□□ -0.77
PTPRN-202ENST00000409251 TMEM200BQ69YZ2 307 aa10.23□□□□□ -0.77
PTPRN-202ENST00000409251 ZNF502Q8TBZ5 544 aa10.23□□□□□ -0.77
PTPRN-202ENST00000409251 MRPL16Q9NX20 251 aaKnown RBP10.23□□□□□ -0.77
PTPRN-202ENST00000409251 LHBP01229 141 aa10.23□□□□□ -0.77
PTPRN-202ENST00000409251 MRPL51Q4U2R6 128 aaKnown RBP10.23□□□□□ -0.77
PTPRN-202ENST00000409251 C1orf122Q6ZSJ8 110 aa10.23□□□□□ -0.77
PTPRN-202ENST00000409251 BOD1L2Q8IYS8 172 aa10.23□□□□□ -0.77
PTPRN-202ENST00000409251 SLC25A39Q9BZJ4 359 aaPredicted RBP10.23□□□□□ -0.77
PTPRN-202ENST00000409251 AAMDCQ9H7C9 122 aa10.23□□□□□ -0.77
PTPRN-202ENST00000409251 RAB9BQ9NP90 201 aa10.23□□□□□ -0.77
PTPRN-202ENST00000409251 ONECUT1Q9UBC0 465 aa10.23□□□□□ -0.77
PTPRN-202ENST00000409251 SPINK8P0C7L1 97 aa10.22□□□□□ -0.77
PTPRN-202ENST00000409251 SCGB1C2P0DMR2 95 aa10.22□□□□□ -0.77
PTPRN-202ENST00000409251 OR9G4Q8NGQ1 327 aa10.22□□□□□ -0.77
PTPRN-202ENST00000409251 TMEM8BA6NDV4 472 aa10.22□□□□□ -0.77
PTPRN-202ENST00000409251 TMEM178BH3BS89 294 aa10.22□□□□□ -0.77
PTPRN-202ENST00000409251 FGF6P10767 208 aa10.22□□□□□ -0.77
PTPRN-202ENST00000409251 RPS20P60866 119 aaKnown RBP10.22□□□□□ -0.77
PTPRN-202ENST00000409251 SLC25A48Q6ZT89 311 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms