RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 FOXA3P55318 350 aaPredicted RBP1.29□□□□□ -2.2
PTPN12-202ENST00000407343 COPZ1P61923 177 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 DYNLT1P63172 113 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 QRFPP83859 136 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 CCSMST1Q4G0I0 132 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 HSD17B12Q53GQ0 312 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 OCIAD2Q56VL3 154 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 GLIPR1L1Q6UWM5 242 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 CTAGE3PQ8IX95 158 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 LINC00471Q8N535 108 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 OR5A2Q8NGI9 324 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 ZNF418Q8TF45 676 aaPredicted RBP1.29□□□□□ -2.2
PTPN12-202ENST00000407343 TCEAL7Q9BRU2 100 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 GNG8Q9UK08 70 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 FAM135BQ49AJ0 1406 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 BCL9LQ86UU0 1499 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 FAM135AQ9P2D6 1515 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 RIMBP3CA6NJZ7 1639 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 RIMBP3BA6NNM3 1639 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 RIMBP3Q9UFD9 1639 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 ECM29Q5VYK3 1845 aa1.29□□□□□ -2.2
PTPN12-202ENST00000407343 NUP210Q8TEM1 1887 aaPredicted RBP1.29□□□□□ -2.2
PTPN12-202ENST00000407343 LOC100130705A0A1B0GUX0 176 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 C7orf71A4D174 169 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 ZNF670-ZNF695F2Z2N8 137 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 F6UZH7 168 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 J3QR89 54 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 NCR2O95944 276 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 TCRAP04437 139 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 SLC25A5P05141 298 aaKnown RBP1.28□□□□□ -2.2
PTPN12-202ENST00000407343 CRYGSP22914 178 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 AKR1D1P51857 326 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 RNASE10Q5GAN6 216 aaKnown RBP1.28□□□□□ -2.2
PTPN12-202ENST00000407343 SPANXN5Q5MJ07 72 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 EIF5AL1Q6IS14 154 aaKnown RBP1.28□□□□□ -2.2
PTPN12-202ENST00000407343 SCIMPQ6UWF3 145 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 MORN4Q8NDC4 146 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 OR5D16Q8NGK9 328 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 OR5H6Q8NGV6 325 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 DIRC1Q969H9 104 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 PRELID3AQ96N28 172 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 SDF2Q99470 211 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 BANF2Q9H503 90 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 GRIN2AQ12879 1464 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 MBD5Q9P267 1494 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 FRMPD1Q5SYB0 1578 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 TRPM1Q7Z4N2 1603 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 PHLPP1O60346 1717 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 ARHGEF28Q8N1W1 1705 aaKnown RBP1.28□□□□□ -2.2
PTPN12-202ENST00000407343 UBR2Q8IWV8 1755 aa1.28□□□□□ -2.2
PTPN12-202ENST00000407343 VIRMAQ69YN4 1812 aaKnown RBP1.28□□□□□ -2.2
PTPN12-202ENST00000407343 FBN2P35556 2912 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 NUP210LQ5VU65 1888 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 SPEF2Q9C093 1822 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 NALCNQ8IZF0 1738 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 PIK3C2AO00443 1686 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 NISCHQ9Y2I1 1504 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 KDM6AO15550 1401 aaPredicted RBP1.27□□□□□ -2.21
PTPN12-202ENST00000407343 TMEM2Q9UHN6 1383 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 TRAV27A0A087WT01 109 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 SPAARA0A1B0GVQ0 90 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 OR2T8A6NH00 312 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 RER1O15258 196 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 MT-ND6P03923 174 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 RBP2P50120 134 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 C3orf62Q6ZUJ4 267 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 Q8IYB0 196 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 MMGT1Q8N4V1 131 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 OBSCN-AS1Q96MR7 158 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 ZNF714Q96N38 554 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 BCL2L10Q9HD36 194 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 TAS2R4Q9NYW5 299 aa1.27□□□□□ -2.21
PTPN12-202ENST00000407343 FER1L6Q2WGJ9 1857 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 EIF4G3O43432 1585 aaKnown RBP1.26□□□□□ -2.21
PTPN12-202ENST00000407343 MYOM3Q5VTT5 1437 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 A8MWV9 139 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 B4DSR2 109 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 CORTO00230 105 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 UQCRQO14949 82 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 TIMM17BO60830 172 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 HBDP02042 147 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 IFNA4P05014 189 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 APODP05090 189 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 BAALC-AS2P0C853 105 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 HLA-DRB4P13762 266 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 ZNF93P35789 620 aaPredicted RBP1.26□□□□□ -2.21
PTPN12-202ENST00000407343 SNRPD3P62318 126 aaKnown RBP1.26□□□□□ -2.21
PTPN12-202ENST00000407343 CNBPP62633 177 aaKnown RBP1.26□□□□□ -2.21
PTPN12-202ENST00000407343 MYL5Q02045 173 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 PLGLB1Q02325 96 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 KLRD1Q13241 179 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 TMEM91Q6ZNR0 172 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 TEN1Q86WV5 123 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 FAM216BQ8N7L0 139 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.26□□□□□ -2.21
PTPN12-202ENST00000407343 OR10AC1Q8NH08 325 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 MAGOHBQ96A72 148 aaKnown RBP1.26□□□□□ -2.21
PTPN12-202ENST00000407343 TMEM191AQ9H0A3 160 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 COMMD3Q9UBI1 195 aa1.26□□□□□ -2.21
PTPN12-202ENST00000407343 DNAJC15Q9Y5T4 150 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms