RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 DOPEY2Q9Y3R5 2298 aa18.85■□□□□ 0.61
DNMT3A-206ENST00000406659 HAX1O00165 279 aa18.85■□□□□ 0.61
DNMT3A-206ENST00000406659 S100A12P80511 92 aa18.85■□□□□ 0.61
DNMT3A-206ENST00000406659 LINC00310P59036 64 aa18.84■□□□□ 0.61
DNMT3A-206ENST00000406659 PAFAH1B2P68402 229 aa18.84■□□□□ 0.61
DNMT3A-206ENST00000406659 JOSD1Q15040 202 aaPredicted RBP18.84■□□□□ 0.61
DNMT3A-206ENST00000406659 FAM106AQ4KMX7 169 aa18.84■□□□□ 0.61
DNMT3A-206ENST00000406659 Q6AWC8 147 aa18.84■□□□□ 0.61
DNMT3A-206ENST00000406659 WFDC11Q8NEX6 87 aa18.84■□□□□ 0.61
DNMT3A-206ENST00000406659 A0A1B0GUT8 65 aa18.83■□□□□ 0.61
DNMT3A-206ENST00000406659 DNLZQ5SXM8 178 aa18.83■□□□□ 0.61
DNMT3A-206ENST00000406659 C10orf99Q6UWK7 81 aa18.83■□□□□ 0.61
DNMT3A-206ENST00000406659 ZNF702PQ9H963 129 aa18.83■□□□□ 0.61
DNMT3A-206ENST00000406659 TENM4Q6N022 2769 aa18.83■□□□□ 0.61
DNMT3A-206ENST00000406659 RIGQ13278 110 aa18.83■□□□□ 0.6
DNMT3A-206ENST00000406659 IGHV7-4-1A0A0J9YVY3 117 aa18.82■□□□□ 0.6
DNMT3A-206ENST00000406659 TM4SF20Q53R12 229 aa18.82■□□□□ 0.6
DNMT3A-206ENST00000406659 CDPF1Q6NVV7 123 aa18.82■□□□□ 0.6
DNMT3A-206ENST00000406659 DAZ1Q9NQZ3 744 aaKnown RBP18.82■□□□□ 0.6
DNMT3A-206ENST00000406659 GSN-AS1Q9NRJ2 163 aa18.82■□□□□ 0.6
DNMT3A-206ENST00000406659 CREBBPQ92793 2442 aa18.82■□□□□ 0.6
DNMT3A-206ENST00000406659 TMSB15BA0A087X1C1 80 aa18.81■□□□□ 0.6
DNMT3A-206ENST00000406659 ZNF80P51504 273 aaPredicted RBP18.81■□□□□ 0.6
DNMT3A-206ENST00000406659 TMEM78Q5T7P6 136 aa18.81■□□□□ 0.6
DNMT3A-206ENST00000406659 BORCS7Q96B45 105 aa18.81■□□□□ 0.6
DNMT3A-206ENST00000406659 AGPAT4-IT1Q9H0P7 198 aa18.81■□□□□ 0.6
DNMT3A-206ENST00000406659 RPS20P60866 119 aaKnown RBP18.81■□□□□ 0.6
DNMT3A-206ENST00000406659 TEX29Q8N6K0 151 aa18.81■□□□□ 0.6
DNMT3A-206ENST00000406659 TPPP3Q9BW30 176 aa18.81■□□□□ 0.6
DNMT3A-206ENST00000406659 RHPN1-AS1Q9BWJ2 59 aa18.81■□□□□ 0.6
DNMT3A-206ENST00000406659 K7EMT4 169 aa18.8■□□□□ 0.6
DNMT3A-206ENST00000406659 RPLP1P05386 114 aaKnown RBP18.8■□□□□ 0.6
DNMT3A-206ENST00000406659 ARMS2P0C7Q2 107 aa18.8■□□□□ 0.6
DNMT3A-206ENST00000406659 RPL11P62913 178 aaKnown RBP18.8■□□□□ 0.6
DNMT3A-206ENST00000406659 FOXE3Q13461 319 aa18.8■□□□□ 0.6
DNMT3A-206ENST00000406659 GPHB5Q86YW7 130 aa18.8■□□□□ 0.6
DNMT3A-206ENST00000406659 SIGLECL1Q8N7X8 197 aa18.8■□□□□ 0.6
DNMT3A-206ENST00000406659 ALKBH7Q9BT30 221 aaPredicted RBP18.8■□□□□ 0.6
DNMT3A-206ENST00000406659 SAMD10Q9BYL1 202 aa18.8■□□□□ 0.6
DNMT3A-206ENST00000406659 A0A1B0GW15 77 aa18.79■□□□□ 0.6
DNMT3A-206ENST00000406659 FABP5P3A8MUU1 101 aa18.79■□□□□ 0.6
DNMT3A-206ENST00000406659 ELANEP08246 267 aa18.79■□□□□ 0.6
DNMT3A-206ENST00000406659 ZNF138P52744 262 aa18.79■□□□□ 0.6
DNMT3A-206ENST00000406659 IL17RELQ6ZVW7 336 aa18.79■□□□□ 0.6
DNMT3A-206ENST00000406659 ZNF738Q8NE65 137 aa18.79■□□□□ 0.6
DNMT3A-206ENST00000406659 C18orf32Q8TCD1 76 aa18.79■□□□□ 0.6
DNMT3A-206ENST00000406659 SMPXQ9UHP9 88 aa18.79■□□□□ 0.6
DNMT3A-206ENST00000406659 KLF5Q13887 457 aaPredicted RBP18.78■□□□□ 0.6
DNMT3A-206ENST00000406659 PRR31Q5SQ13 230 aa18.78■□□□□ 0.6
DNMT3A-206ENST00000406659 C9orf47Q6ZRZ4 202 aa18.78■□□□□ 0.6
DNMT3A-206ENST00000406659 KCNS1Q96KK3 526 aa18.78■□□□□ 0.6
DNMT3A-206ENST00000406659 RCHY1Q96PM5 261 aa18.78■□□□□ 0.6
DNMT3A-206ENST00000406659 SRSF2Q01130 221 aaKnown RBP18.77■□□□□ 0.6
DNMT3A-206ENST00000406659 IQCJQ1A5X6 159 aa18.77■□□□□ 0.6
DNMT3A-206ENST00000406659 C20orf173Q96LM9 149 aa18.77■□□□□ 0.6
DNMT3A-206ENST00000406659 NRN1Q9NPD7 142 aa18.77■□□□□ 0.6
DNMT3A-206ENST00000406659 UFC1Q9Y3C8 167 aa18.77■□□□□ 0.6
DNMT3A-206ENST00000406659 TEX15Q9BXT5 2789 aa18.76■□□□□ 0.59
DNMT3A-206ENST00000406659 ORM1P02763 201 aa18.76■□□□□ 0.59
DNMT3A-206ENST00000406659 LYZL1Q6UWQ5 148 aa18.76■□□□□ 0.59
DNMT3A-206ENST00000406659 DUX5Q96PT3 197 aa18.76■□□□□ 0.59
DNMT3A-206ENST00000406659 SOCS3O14543 225 aa18.75■□□□□ 0.59
DNMT3A-206ENST00000406659 LOC102724200A0A096LPH7 203 aaPredicted RBP18.74■□□□□ 0.59
DNMT3A-206ENST00000406659 PPP1R14DQ9NXH3 145 aa18.74■□□□□ 0.59
DNMT3A-206ENST00000406659 OVOL1O14753 267 aa18.73■□□□□ 0.59
DNMT3A-206ENST00000406659 GPX1P07203 203 aa18.73■□□□□ 0.59
DNMT3A-206ENST00000406659 LGALS1P09382 135 aaKnown RBP18.73■□□□□ 0.59
DNMT3A-206ENST00000406659 Q8N2B8 174 aa18.73■□□□□ 0.59
DNMT3A-206ENST00000406659 FER1L6-AS1Q8NA97 138 aa18.73■□□□□ 0.59
DNMT3A-206ENST00000406659 GATD1Q8NB37 220 aa18.73■□□□□ 0.59
DNMT3A-206ENST00000406659 OR10J6PQ8NGY7 276 aa18.73■□□□□ 0.59
DNMT3A-206ENST00000406659 MYOZ3Q8TDC0 251 aa18.73■□□□□ 0.59
DNMT3A-206ENST00000406659 IGKV3-7A0A075B6H7 116 aa18.72■□□□□ 0.59
DNMT3A-206ENST00000406659 SCGB1D1O95968 90 aa18.72■□□□□ 0.59
DNMT3A-206ENST00000406659 HIST1H1AQ02539 215 aaPredicted RBP18.72■□□□□ 0.59
DNMT3A-206ENST00000406659 ZNF705DP0CH99 300 aaPredicted RBP18.71■□□□□ 0.59
DNMT3A-206ENST00000406659 ZNF705BP0CI00 300 aaPredicted RBP18.71■□□□□ 0.59
DNMT3A-206ENST00000406659 PMCHP20382 165 aa18.71■□□□□ 0.59
DNMT3A-206ENST00000406659 AMTP48728 403 aa18.71■□□□□ 0.59
DNMT3A-206ENST00000406659 Q6ZWC4 215 aa18.71■□□□□ 0.59
DNMT3A-206ENST00000406659 TMEM86BQ8N661 226 aa18.71■□□□□ 0.59
DNMT3A-206ENST00000406659 UBE2E2Q96LR5 201 aa18.71■□□□□ 0.59
DNMT3A-206ENST00000406659 LINC00477Q96M19 166 aa18.71■□□□□ 0.59
DNMT3A-206ENST00000406659 ZNF324O75467 553 aaPredicted RBP18.7■□□□□ 0.58
DNMT3A-206ENST00000406659 LINC01559Q495D7 138 aa18.7■□□□□ 0.58
DNMT3A-206ENST00000406659 RNF152Q8N8N0 203 aa18.7■□□□□ 0.58
DNMT3A-206ENST00000406659 LENEPQ9Y5L5 61 aa18.7■□□□□ 0.58
DNMT3A-206ENST00000406659 MXRA5Q9NR99 2828 aa18.7■□□□□ 0.58
DNMT3A-206ENST00000406659 EDN2P20800 178 aa18.7■□□□□ 0.58
DNMT3A-206ENST00000406659 IGLC6P0CF74 106 aa18.69■□□□□ 0.58
DNMT3A-206ENST00000406659 CTRLP40313 264 aa18.69■□□□□ 0.58
DNMT3A-206ENST00000406659 SSTP61278 116 aa18.69■□□□□ 0.58
DNMT3A-206ENST00000406659 SELENOKQ9Y6D0 94 aa18.69■□□□□ 0.58
DNMT3A-206ENST00000406659 ITPR3Q14573 2671 aa18.69■□□□□ 0.58
DNMT3A-206ENST00000406659 SRD5A1P18405 259 aa18.68■□□□□ 0.58
DNMT3A-206ENST00000406659 TMEM213A2RRL7 107 aa18.68■□□□□ 0.58
DNMT3A-206ENST00000406659 FAM181BA6NEQ2 426 aa18.68■□□□□ 0.58
DNMT3A-206ENST00000406659 RNASEKQ6P5S7 137 aaKnown RBP18.68■□□□□ 0.58
DNMT3A-206ENST00000406659 ZNF493Q6ZR52 646 aa18.68■□□□□ 0.58
DNMT3A-206ENST00000406659 FOXC2Q99958 501 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms