RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 LYZP61626 148 aa11.89□□□□□ -0.51
CYLD-202ENST00000398568 WT1-ASQ06250 92 aa11.89□□□□□ -0.51
CYLD-202ENST00000398568 C17orf58Q2M2W7 97 aa11.89□□□□□ -0.51
CYLD-202ENST00000398568 NXT2Q9NPJ8 142 aaKnown RBP11.89□□□□□ -0.51
CYLD-202ENST00000398568 TRBV6-1A0A0K0K1D8 114 aa11.89□□□□□ -0.51
CYLD-202ENST00000398568 MYOZ3Q8TDC0 251 aa11.89□□□□□ -0.51
CYLD-202ENST00000398568 TRGV9Q99603 122 aa11.89□□□□□ -0.51
CYLD-202ENST00000398568 TMEM75Q8N9X5 138 aa11.88□□□□□ -0.51
CYLD-202ENST00000398568 SLC25A39Q9BZJ4 359 aaPredicted RBP11.88□□□□□ -0.51
CYLD-202ENST00000398568 IGSF10Q6WRI0 2623 aa11.88□□□□□ -0.51
CYLD-202ENST00000398568 MEOX1P50221 254 aa11.88□□□□□ -0.51
CYLD-202ENST00000398568 C10orf55Q5SWW7 151 aa11.88□□□□□ -0.51
CYLD-202ENST00000398568 CARD19Q96LW7 228 aa11.88□□□□□ -0.51
CYLD-202ENST00000398568 HIF1ANQ9NWT6 349 aa11.88□□□□□ -0.51
CYLD-202ENST00000398568 LINC01549A6NIU2 74 aa11.87□□□□□ -0.51
CYLD-202ENST00000398568 MORN3Q6PF18 240 aaPredicted RBP11.87□□□□□ -0.51
CYLD-202ENST00000398568 ZNF71Q9NQZ8 489 aaPredicted RBP11.87□□□□□ -0.51
CYLD-202ENST00000398568 MRPL35Q9NZE8 188 aaKnown RBP11.87□□□□□ -0.51
CYLD-202ENST00000398568 TRBV7-3A0A075B6L6 115 aa11.87□□□□□ -0.51
CYLD-202ENST00000398568 TNFRSF13BO14836 293 aaPredicted RBP11.87□□□□□ -0.51
CYLD-202ENST00000398568 TRBV20-1A0A075B6N2 111 aa11.87□□□□□ -0.51
CYLD-202ENST00000398568 E7EUB6 86 aa11.87□□□□□ -0.51
CYLD-202ENST00000398568 THBDP07204 575 aa11.87□□□□□ -0.51
CYLD-202ENST00000398568 NDUFV3P56181 108 aaKnown RBP11.87□□□□□ -0.51
CYLD-202ENST00000398568 Q0VFX4 171 aa11.87□□□□□ -0.51
CYLD-202ENST00000398568 MBNL2Q5VZF2 373 aaKnown RBP11.87□□□□□ -0.51
CYLD-202ENST00000398568 INS-IGF2F8WCM5 200 aa11.86□□□□□ -0.51
CYLD-202ENST00000398568 PRB4P10163 310 aaPredicted RBP11.86□□□□□ -0.51
CYLD-202ENST00000398568 FBXL15Q9H469 300 aa11.86□□□□□ -0.51
CYLD-202ENST00000398568 DNAJC13O75165 2243 aa11.86□□□□□ -0.51
CYLD-202ENST00000398568 IGHV3-21A0A0B4J1V1 117 aa11.86□□□□□ -0.51
CYLD-202ENST00000398568 ZNF785A8K8V0 405 aa11.86□□□□□ -0.51
CYLD-202ENST00000398568 FABP5P3A8MUU1 101 aa11.86□□□□□ -0.51
CYLD-202ENST00000398568 SRRM5B3KS81 715 aa11.86□□□□□ -0.51
CYLD-202ENST00000398568 CCDC179H3BU77 68 aa11.86□□□□□ -0.51
CYLD-202ENST00000398568 LYZL6O75951 148 aa11.86□□□□□ -0.51
CYLD-202ENST00000398568 NDUFA3O95167 84 aa11.86□□□□□ -0.51
CYLD-202ENST00000398568 CRIP1P50238 77 aa11.86□□□□□ -0.51
CYLD-202ENST00000398568 HCP5Q6MZN7 132 aa11.86□□□□□ -0.51
CYLD-202ENST00000398568 RHODO00212 210 aa11.85□□□□□ -0.51
CYLD-202ENST00000398568 IFITM1P13164 125 aa11.85□□□□□ -0.51
CYLD-202ENST00000398568 NHLRC4P0CG21 123 aaPredicted RBP11.85□□□□□ -0.51
CYLD-202ENST00000398568 KIR2DL4Q99706 377 aa11.85□□□□□ -0.51
CYLD-202ENST00000398568 TNFRSF18Q9Y5U5 241 aa11.85□□□□□ -0.51
CYLD-202ENST00000398568 MYMXA0A1B0GTQ4 84 aa11.85□□□□□ -0.51
CYLD-202ENST00000398568 CGB3P0DN86 165 aa11.85□□□□□ -0.51
CYLD-202ENST00000398568 CGB7P0DN87 165 aa11.85□□□□□ -0.51
CYLD-202ENST00000398568 SRSF9Q13242 221 aaKnown RBP eCLIP11.85□□□□□ -0.51
CYLD-202ENST00000398568 MRPL20Q9BYC9 149 aaKnown RBP11.84□□□□□ -0.51
CYLD-202ENST00000398568 SCGB2A1O75556 95 aa11.84□□□□□ -0.51
CYLD-202ENST00000398568 HOXB4P17483 251 aaPredicted RBP11.84□□□□□ -0.51
CYLD-202ENST00000398568 FDCSPQ8NFU4 85 aa11.84□□□□□ -0.51
CYLD-202ENST00000398568 C8orf49Q96NF6 230 aa11.84□□□□□ -0.51
CYLD-202ENST00000398568 SPANXA1Q9NS26 97 aa11.84□□□□□ -0.51
CYLD-202ENST00000398568 TMEM14CQ9P0S9 112 aa11.84□□□□□ -0.51
CYLD-202ENST00000398568 K7EM74 188 aa11.83□□□□□ -0.51
CYLD-202ENST00000398568 SRD5A1P18405 259 aa11.83□□□□□ -0.51
CYLD-202ENST00000398568 ZFP2Q6ZN57 461 aa11.83□□□□□ -0.51
CYLD-202ENST00000398568 TMEM167AQ8TBQ9 72 aa11.83□□□□□ -0.51
CYLD-202ENST00000398568 TRAV8-2A0A0B4J237 113 aa11.83□□□□□ -0.52
CYLD-202ENST00000398568 SCGB1C2P0DMR2 95 aa11.83□□□□□ -0.52
CYLD-202ENST00000398568 CITED1Q99966 193 aa11.83□□□□□ -0.52
CYLD-202ENST00000398568 ZNRD1Q9P1U0 126 aa11.83□□□□□ -0.52
CYLD-202ENST00000398568 LINC01619G3V211 115 aa11.83□□□□□ -0.52
CYLD-202ENST00000398568 TNFRSF6BO95407 300 aa11.83□□□□□ -0.52
CYLD-202ENST00000398568 PLNP26678 52 aa11.83□□□□□ -0.52
CYLD-202ENST00000398568 PLGLAQ15195 96 aa11.83□□□□□ -0.52
CYLD-202ENST00000398568 CFAP46Q8IYW2 2715 aa11.83□□□□□ -0.52
CYLD-202ENST00000398568 SH2D1AO60880 128 aa11.82□□□□□ -0.52
CYLD-202ENST00000398568 SCGB1D4Q6XE38 83 aa11.82□□□□□ -0.52
CYLD-202ENST00000398568 TMEM190Q8WZ59 177 aa11.82□□□□□ -0.52
CYLD-202ENST00000398568 HES7Q9BYE0 225 aa11.82□□□□□ -0.52
CYLD-202ENST00000398568 PCSK5Q92824 1860 aa11.82□□□□□ -0.52
CYLD-202ENST00000398568 SPTAN1Q13813 2472 aaKnown RBP11.82□□□□□ -0.52
CYLD-202ENST00000398568 PRTN3P24158 256 aa11.82□□□□□ -0.52
CYLD-202ENST00000398568 TTTY12Q9BZ98 90 aa11.82□□□□□ -0.52
CYLD-202ENST00000398568 DIAPH2-AS1Q14236 149 aa11.82□□□□□ -0.52
CYLD-202ENST00000398568 LY6DQ14210 128 aa11.81□□□□□ -0.52
CYLD-202ENST00000398568 PPP1R27Q86WC6 154 aa11.81□□□□□ -0.52
CYLD-202ENST00000398568 ANKRD29Q8N6D5 301 aa11.81□□□□□ -0.52
CYLD-202ENST00000398568 OR4C13Q8NGP0 309 aa11.81□□□□□ -0.52
CYLD-202ENST00000398568 NGBQ9NPG2 151 aa11.81□□□□□ -0.52
CYLD-202ENST00000398568 A0A087WX48 190 aa11.81□□□□□ -0.52
CYLD-202ENST00000398568 IGF2-ASQ6U949 168 aa11.81□□□□□ -0.52
CYLD-202ENST00000398568 YAE1D1Q9NRH1 226 aa11.81□□□□□ -0.52
CYLD-202ENST00000398568 TRBV19A0A075B6N1 114 aa11.81□□□□□ -0.52
CYLD-202ENST00000398568 IGHV1-2P23083 117 aa11.81□□□□□ -0.52
CYLD-202ENST00000398568 ASIPP42127 132 aa11.81□□□□□ -0.52
CYLD-202ENST00000398568 VMA21Q3ZAQ7 101 aa11.81□□□□□ -0.52
CYLD-202ENST00000398568 TMEM133Q9H2Q1 129 aa11.8□□□□□ -0.52
CYLD-202ENST00000398568 RPUSD1Q9UJJ7 312 aaKnown RBP11.8□□□□□ -0.52
CYLD-202ENST00000398568 TGFAP01135 160 aa11.8□□□□□ -0.52
CYLD-202ENST00000398568 AAMDCQ9H7C9 122 aa11.8□□□□□ -0.52
CYLD-202ENST00000398568 A0A1W2PPI3 338 aa11.8□□□□□ -0.52
CYLD-202ENST00000398568 CGB1A6NKQ9 187 aa11.8□□□□□ -0.52
CYLD-202ENST00000398568 FCN3O75636 299 aa11.8□□□□□ -0.52
CYLD-202ENST00000398568 DEFB108BQ8NET1 73 aa11.8□□□□□ -0.52
CYLD-202ENST00000398568 C17orf77Q96MU5 243 aa11.8□□□□□ -0.52
CYLD-202ENST00000398568 TMEM78Q5T7P6 136 aa11.79□□□□□ -0.52
CYLD-202ENST00000398568 Q8N8P6 123 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms