RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 CLEC5AQ9NY25 188 aa7.58□□□□□ -1.2
NEDD8-202ENST00000396828 TP53TG1Q9Y2A0 90 aa7.58□□□□□ -1.2
NEDD8-202ENST00000396828 DNAH17Q9UFH2 4485 aa7.57□□□□□ -1.2
NEDD8-202ENST00000396828 IGKV3-7A0A075B6H7 116 aa7.57□□□□□ -1.2
NEDD8-202ENST00000396828 GGTLC3B5MD39 225 aa7.57□□□□□ -1.2
NEDD8-202ENST00000396828 TMEM250H0YL14 139 aa7.57□□□□□ -1.2
NEDD8-202ENST00000396828 SLC17A3O00476 420 aa7.57□□□□□ -1.2
NEDD8-202ENST00000396828 SLC25A5P05141 298 aaKnown RBP7.57□□□□□ -1.2
NEDD8-202ENST00000396828 ID1P41134 155 aa7.57□□□□□ -1.2
NEDD8-202ENST00000396828 APOC4P55056 127 aa7.57□□□□□ -1.2
NEDD8-202ENST00000396828 FAM90A2PQ658T7 463 aa7.57□□□□□ -1.2
NEDD8-202ENST00000396828 EXOC3-AS1Q8N2X6 119 aa7.57□□□□□ -1.2
NEDD8-202ENST00000396828 C5orf17Q8NAS9 161 aa7.57□□□□□ -1.2
NEDD8-202ENST00000396828 SLC35B3Q9H1N7 401 aa7.57□□□□□ -1.2
NEDD8-202ENST00000396828 MS4A6AQ9H2W1 248 aa7.57□□□□□ -1.2
NEDD8-202ENST00000396828 MAP6D1Q9H9H5 199 aa7.57□□□□□ -1.2
NEDD8-202ENST00000396828 PRELID1Q9Y255 219 aa7.57□□□□□ -1.2
NEDD8-202ENST00000396828 NUPR2A6NF83 97 aa7.56□□□□□ -1.2
NEDD8-202ENST00000396828 K7EQM0 130 aa7.56□□□□□ -1.2
NEDD8-202ENST00000396828 ISLRO14498 428 aa7.56□□□□□ -1.2
NEDD8-202ENST00000396828 SRP19P09132 144 aaKnown RBP7.56□□□□□ -1.2
NEDD8-202ENST00000396828 SFTA3P0C7M3 94 aa7.56□□□□□ -1.2
NEDD8-202ENST00000396828 TFPI2P48307 235 aa7.56□□□□□ -1.2
NEDD8-202ENST00000396828 CEBPGP53567 150 aa7.56□□□□□ -1.2
NEDD8-202ENST00000396828 SNRPD3P62318 126 aaKnown RBP7.56□□□□□ -1.2
NEDD8-202ENST00000396828 CCDC28AQ8IWP9 274 aa7.56□□□□□ -1.2
NEDD8-202ENST00000396828 GBGT1Q8N5D6 347 aa7.56□□□□□ -1.2
NEDD8-202ENST00000396828 ARL6IP6Q8N6S5 226 aa7.56□□□□□ -1.2
NEDD8-202ENST00000396828 HIST1H2BAQ96A08 127 aa7.56□□□□□ -1.2
NEDD8-202ENST00000396828 RPUSD4Q96CM3 377 aaKnown RBP7.56□□□□□ -1.2
NEDD8-202ENST00000396828 EPDR1Q9UM22 224 aa7.56□□□□□ -1.2
NEDD8-202ENST00000396828 PKHD1P08F94 4074 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 TRAV2A0A0B4J234 112 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 KIR2DL5BA0A0G2JN68 375 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 KIR2DL5BA0A0G2JPC4 375 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 SERTM2A0A1B0GWG4 89 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 OR4C46A6NHA9 309 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 KRBOX1C9JBD0 128 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 UBE2CO00762 179 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 NANOS2P60321 138 aaKnown RBP7.55□□□□□ -1.2
NEDD8-202ENST00000396828 SOHLH1Q5JUK2 328 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 KIR2DL5AQ8N109 375 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 CYB561D1Q8N8Q1 229 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 KIR2DL5BQ8NHK3 375 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 DCANP1Q8TF63 244 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 PHLDA1Q8WV24 401 aaPredicted RBP7.55□□□□□ -1.2
NEDD8-202ENST00000396828 MRPL53Q96EL3 112 aaKnown RBP7.55□□□□□ -1.2
NEDD8-202ENST00000396828 ATG101Q9BSB4 218 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 RPH3ALQ9UNE2 315 aa7.55□□□□□ -1.2
NEDD8-202ENST00000396828 PKD1P98161 4303 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 TRAV8-2A0A0B4J237 113 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 SCO2A0A1W2PP80 73 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 TMEM218A2RU14 115 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 C9JQL5 133 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 F8W036 122 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 PEX7O00628 323 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 SOCS3O14543 225 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 TCRAP04437 139 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 S100A9P06702 114 aaKnown RBP7.54□□□□□ -1.2
NEDD8-202ENST00000396828 AKR1C3P42330 323 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 CNN1P51911 297 aaKnown RBP7.54□□□□□ -1.2
NEDD8-202ENST00000396828 PSG3Q16557 428 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 FAM74A3Q4VXF1 159 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 FAM24BQ8N5W8 94 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 RNF182Q8N6D2 247 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 C11orf52Q96A22 123 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 LINC00052Q96N35 136 aa7.54□□□□□ -1.2
NEDD8-202ENST00000396828 FBLL1A6NHQ2 334 aaKnown RBP7.53□□□□□ -1.2
NEDD8-202ENST00000396828 ZNF727A8MUV8 499 aa7.53□□□□□ -1.2
NEDD8-202ENST00000396828 K7EQG2 157 aa7.53□□□□□ -1.2
NEDD8-202ENST00000396828 DEFB4AO15263 64 aa7.53□□□□□ -1.2
NEDD8-202ENST00000396828 UBE2G1P62253 170 aa7.53□□□□□ -1.2
NEDD8-202ENST00000396828 GNG5P63218 68 aa7.53□□□□□ -1.2
NEDD8-202ENST00000396828 ZNF674Q2M3X9 581 aa7.53□□□□□ -1.2
NEDD8-202ENST00000396828 IGFL4Q6B9Z1 124 aa7.53□□□□□ -1.2
NEDD8-202ENST00000396828 ZNF738Q8NE65 137 aa7.53□□□□□ -1.2
NEDD8-202ENST00000396828 CSTL1Q9H114 145 aa7.53□□□□□ -1.2
NEDD8-202ENST00000396828 PARLQ9H300 379 aa7.53□□□□□ -1.2
NEDD8-202ENST00000396828 KIAA1109Q2LD37 5005 aa7.53□□□□□ -1.2
NEDD8-202ENST00000396828 AGRNO00468 2067 aa7.52□□□□□ -1.21
NEDD8-202ENST00000396828 DIRC3C9JPN6 131 aa7.52□□□□□ -1.21
NEDD8-202ENST00000396828 M0R3E3 92 aa7.52□□□□□ -1.21
NEDD8-202ENST00000396828 HLA-DMBP28068 263 aa7.52□□□□□ -1.21
NEDD8-202ENST00000396828 RPL35P42766 123 aaKnown RBP7.52□□□□□ -1.21
NEDD8-202ENST00000396828 CMC4P56277 68 aaPredicted RBP7.52□□□□□ -1.21
NEDD8-202ENST00000396828 GOLT1AQ6ZVE7 132 aa7.52□□□□□ -1.21
NEDD8-202ENST00000396828 FMC1Q96HJ9 113 aa7.52□□□□□ -1.21
NEDD8-202ENST00000396828 SMIM7Q9BQ49 75 aa7.52□□□□□ -1.21
NEDD8-202ENST00000396828 SEC11CQ9BY50 192 aa7.52□□□□□ -1.21
NEDD8-202ENST00000396828 KLK5Q9Y337 293 aaPredicted RBP7.52□□□□□ -1.21
NEDD8-202ENST00000396828 RBAKDNA6NC62 111 aa7.51□□□□□ -1.21
NEDD8-202ENST00000396828 ZNF705FA8MVS1 300 aaPredicted RBP7.51□□□□□ -1.21
NEDD8-202ENST00000396828 ATP6V1G1O75348 118 aa7.51□□□□□ -1.21
NEDD8-202ENST00000396828 ZNF688P0C7X2 276 aa7.51□□□□□ -1.21
NEDD8-202ENST00000396828 S100A1P23297 94 aa7.51□□□□□ -1.21
NEDD8-202ENST00000396828 GNG4P50150 75 aa7.51□□□□□ -1.21
NEDD8-202ENST00000396828 TAS2R60P59551 318 aa7.51□□□□□ -1.21
NEDD8-202ENST00000396828 TMEM183BQ1AE95 376 aa7.51□□□□□ -1.21
NEDD8-202ENST00000396828 PSMG4Q5JS54 123 aa7.51□□□□□ -1.21
NEDD8-202ENST00000396828 LGALS9CQ6DKI2 356 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms