RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 IGF2BP2-AS1Q96M15 143 aa11.55□□□□□ -0.56
VAMP1-202ENST00000396308 LINC00479Q96M42 142 aa11.55□□□□□ -0.56
VAMP1-202ENST00000396308 TRAV8-1A0A0A6YYK1 113 aa11.54□□□□□ -0.56
VAMP1-202ENST00000396308 ZNF138P52744 262 aa11.54□□□□□ -0.56
VAMP1-202ENST00000396308 FOXI2Q6ZQN5 318 aa11.54□□□□□ -0.56
VAMP1-202ENST00000396308 C9orf47Q6ZRZ4 202 aa11.54□□□□□ -0.56
VAMP1-202ENST00000396308 LINC01551Q86U37 167 aa11.54□□□□□ -0.56
VAMP1-202ENST00000396308 CLRN3Q8NCR9 226 aa11.54□□□□□ -0.56
VAMP1-202ENST00000396308 SGK494Q96LW2 274 aa11.54□□□□□ -0.56
VAMP1-202ENST00000396308 LINC00477Q96M19 166 aa11.54□□□□□ -0.56
VAMP1-202ENST00000396308 TRBV20OR9-2A0A075B6H5 130 aa11.53□□□□□ -0.56
VAMP1-202ENST00000396308 OR11H12B2RN74 326 aa11.53□□□□□ -0.56
VAMP1-202ENST00000396308 PRAC2D3DTV9 90 aa11.53□□□□□ -0.56
VAMP1-202ENST00000396308 NPIPB6E9PJ23 425 aa11.53□□□□□ -0.56
VAMP1-202ENST00000396308 DEFB131AP59861 70 aa11.53□□□□□ -0.56
VAMP1-202ENST00000396308 RPL23P62829 140 aaKnown RBP11.53□□□□□ -0.56
VAMP1-202ENST00000396308 TMEM183AQ8IXX5 376 aa11.53□□□□□ -0.56
VAMP1-202ENST00000396308 FAM24BQ8N5W8 94 aa11.53□□□□□ -0.56
VAMP1-202ENST00000396308 C15orf54Q8N8G6 183 aa11.53□□□□□ -0.56
VAMP1-202ENST00000396308 VGLL1Q99990 258 aa11.53□□□□□ -0.56
VAMP1-202ENST00000396308 MAP6D1Q9H9H5 199 aa11.53□□□□□ -0.56
VAMP1-202ENST00000396308 LENEPQ9Y5L5 61 aa11.53□□□□□ -0.56
VAMP1-202ENST00000396308 IZUMO1RA6ND01 250 aa11.52□□□□□ -0.57
VAMP1-202ENST00000396308 IGLV2-11P01706 119 aa11.52□□□□□ -0.57
VAMP1-202ENST00000396308 MT-ND4LP03901 98 aa11.52□□□□□ -0.57
VAMP1-202ENST00000396308 PRR31Q5SQ13 230 aa11.52□□□□□ -0.57
VAMP1-202ENST00000396308 GTSCR1Q86UQ5 136 aa11.52□□□□□ -0.57
VAMP1-202ENST00000396308 NHLRC2Q8NBF2 726 aa11.52□□□□□ -0.57
VAMP1-202ENST00000396308 WFDC9Q8NEX5 89 aa11.52□□□□□ -0.57
VAMP1-202ENST00000396308 Q8TAT8 98 aa11.52□□□□□ -0.57
VAMP1-202ENST00000396308 SAV1Q9H4B6 383 aaPredicted RBP11.52□□□□□ -0.57
VAMP1-202ENST00000396308 ZMAT5Q9UDW3 170 aaKnown RBP11.52□□□□□ -0.57
VAMP1-202ENST00000396308 ZNF256Q9Y2P7 627 aaPredicted RBP11.52□□□□□ -0.57
VAMP1-202ENST00000396308 STAB1Q9NY15 2570 aa11.51□□□□□ -0.57
VAMP1-202ENST00000396308 ATRQ13535 2644 aa11.51□□□□□ -0.57
VAMP1-202ENST00000396308 PGPEP1LA6NFU8 196 aa11.51□□□□□ -0.57
VAMP1-202ENST00000396308 PPP1R2P9O14990 202 aa11.51□□□□□ -0.57
VAMP1-202ENST00000396308 ERCC8Q13216 396 aa11.51□□□□□ -0.57
VAMP1-202ENST00000396308 PRR27Q6MZM9 219 aa11.51□□□□□ -0.57
VAMP1-202ENST00000396308 OCC1Q8TAD7 63 aa11.51□□□□□ -0.57
VAMP1-202ENST00000396308 DAZAP1Q96EP5 407 aaKnown RBP11.51□□□□□ -0.57
VAMP1-202ENST00000396308 FAM110AQ9BQ89 295 aa11.51□□□□□ -0.57
VAMP1-202ENST00000396308 RPS10P5Q9NQ39 176 aa11.51□□□□□ -0.57
VAMP1-202ENST00000396308 ZNF492Q9P255 531 aa11.51□□□□□ -0.57
VAMP1-202ENST00000396308 TRBV7-9A0A0J9YWB2 115 aa11.5□□□□□ -0.57
VAMP1-202ENST00000396308 A0A0J9YX75 114 aa11.5□□□□□ -0.57
VAMP1-202ENST00000396308 PRB4P10163 310 aaPredicted RBP11.5□□□□□ -0.57
VAMP1-202ENST00000396308 TSPOP30536 169 aa11.5□□□□□ -0.57
VAMP1-202ENST00000396308 LEPP41159 167 aa11.5□□□□□ -0.57
VAMP1-202ENST00000396308 ERVFC1-1P60608 527 aa11.5□□□□□ -0.57
VAMP1-202ENST00000396308 SMUG1Q53HV7 270 aa11.5□□□□□ -0.57
VAMP1-202ENST00000396308 OR4B1Q8NGF8 309 aa11.5□□□□□ -0.57
VAMP1-202ENST00000396308 ISOC2Q96AB3 205 aa11.5□□□□□ -0.57
VAMP1-202ENST00000396308 ODF3Q96PU9 254 aa11.5□□□□□ -0.57
VAMP1-202ENST00000396308 PRR25Q96S07 402 aa11.5□□□□□ -0.57
VAMP1-202ENST00000396308 AGPAT4-IT1Q9H0P7 198 aa11.5□□□□□ -0.57
VAMP1-202ENST00000396308 AURKAIP1Q9NWT8 199 aaPredicted RBP11.5□□□□□ -0.57
VAMP1-202ENST00000396308 F6UB75 175 aa11.49□□□□□ -0.57
VAMP1-202ENST00000396308 GCGP01275 180 aa11.49□□□□□ -0.57
VAMP1-202ENST00000396308 ZNF705DP0CH99 300 aaPredicted RBP11.49□□□□□ -0.57
VAMP1-202ENST00000396308 ZNF705BP0CI00 300 aaPredicted RBP11.49□□□□□ -0.57
VAMP1-202ENST00000396308 IGLL1P15814 213 aa11.49□□□□□ -0.57
VAMP1-202ENST00000396308 BEAN1Q3B7T3 259 aa11.49□□□□□ -0.57
VAMP1-202ENST00000396308 ACTL10Q5JWF8 245 aa11.49□□□□□ -0.57
VAMP1-202ENST00000396308 ANAPC16Q96DE5 110 aa11.49□□□□□ -0.57
VAMP1-202ENST00000396308 SFRP2Q96HF1 295 aa11.49□□□□□ -0.57
VAMP1-202ENST00000396308 CTDSP1Q9GZU7 261 aa11.49□□□□□ -0.57
VAMP1-202ENST00000396308 C7orf77A4D0Y5 90 aa11.48□□□□□ -0.57
VAMP1-202ENST00000396308 HLA-DRB4P13762 266 aa11.48□□□□□ -0.57
VAMP1-202ENST00000396308 ODF3L2Q3SX64 289 aa11.48□□□□□ -0.57
VAMP1-202ENST00000396308 IBA57Q5T440 356 aaKnown RBP11.48□□□□□ -0.57
VAMP1-202ENST00000396308 STHQ8IWL8 128 aa11.48□□□□□ -0.57
VAMP1-202ENST00000396308 HLA-DRB4X5D2U9 266 aa11.48□□□□□ -0.57
VAMP1-202ENST00000396308 A0A087WWC5 75 aa11.47□□□□□ -0.57
VAMP1-202ENST00000396308 H7BYZ3 331 aa11.47□□□□□ -0.57
VAMP1-202ENST00000396308 K7EN84 100 aa11.47□□□□□ -0.57
VAMP1-202ENST00000396308 IGLV2-8P01709 118 aa11.47□□□□□ -0.57
VAMP1-202ENST00000396308 P01737 135 aa11.47□□□□□ -0.57
VAMP1-202ENST00000396308 FAM162BQ5T6X4 162 aa11.47□□□□□ -0.57
VAMP1-202ENST00000396308 OR10G8Q8NGN5 311 aa11.47□□□□□ -0.57
VAMP1-202ENST00000396308 C8orf49Q96NF6 230 aa11.47□□□□□ -0.57
VAMP1-202ENST00000396308 ASCL2Q99929 193 aa11.47□□□□□ -0.57
VAMP1-202ENST00000396308 MLST8Q9BVC4 326 aa11.47□□□□□ -0.57
VAMP1-202ENST00000396308 KNCNA6PVL3 124 aa11.46□□□□□ -0.57
VAMP1-202ENST00000396308 WIPF1O43516 503 aa11.46□□□□□ -0.57
VAMP1-202ENST00000396308 GPX1P07203 203 aa11.46□□□□□ -0.57
VAMP1-202ENST00000396308 DEFB1P60022 68 aa11.46□□□□□ -0.57
VAMP1-202ENST00000396308 OR5I1Q13606 314 aa11.46□□□□□ -0.57
VAMP1-202ENST00000396308 RNF212Q495C1 297 aa11.46□□□□□ -0.57
VAMP1-202ENST00000396308 FAM231DQ6ZW35 169 aa11.46□□□□□ -0.57
VAMP1-202ENST00000396308 APRG1Q8IVJ8 170 aa11.46□□□□□ -0.57
VAMP1-202ENST00000396308 ZC2HC1AQ96GY0 325 aa11.46□□□□□ -0.57
VAMP1-202ENST00000396308 OSTCQ9NRP0 149 aa11.46□□□□□ -0.57
VAMP1-202ENST00000396308 ZNF705GA8MUZ8 300 aaPredicted RBP11.45□□□□□ -0.58
VAMP1-202ENST00000396308 GATCO43716 136 aaKnown RBP11.45□□□□□ -0.58
VAMP1-202ENST00000396308 IGKV3-20P01619 116 aa11.45□□□□□ -0.58
VAMP1-202ENST00000396308 S100PP25815 95 aa11.45□□□□□ -0.58
VAMP1-202ENST00000396308 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
VAMP1-202ENST00000396308 GDF5OSQ5U4N7 250 aa11.45□□□□□ -0.58
VAMP1-202ENST00000396308 COX8CQ7Z4L0 72 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 329 ms