RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 LGALSLQ3ZCW2 172 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-204ENST00000393546 SSX7Q7RTT5 188 aa13.69□□□□□ -0.22
PDLIM7-204ENST00000393546 LINC01587Q99440 93 aa13.69□□□□□ -0.22
PDLIM7-204ENST00000393546 VGLL1Q99990 258 aa13.69□□□□□ -0.22
PDLIM7-204ENST00000393546 RBAKDNA6NC62 111 aa13.68□□□□□ -0.22
PDLIM7-204ENST00000393546 DIRC3C9JPN6 131 aa13.68□□□□□ -0.22
PDLIM7-204ENST00000393546 SLC25A5P05141 298 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-204ENST00000393546 NANOS2P60321 138 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-204ENST00000393546 ZNF726P1Q15940 193 aa13.68□□□□□ -0.22
PDLIM7-204ENST00000393546 IQCF2Q8IXL9 164 aa13.68□□□□□ -0.22
PDLIM7-204ENST00000393546 ARL6IP6Q8N6S5 226 aa13.68□□□□□ -0.22
PDLIM7-204ENST00000393546 C20orf144Q9BQM9 153 aa13.68□□□□□ -0.22
PDLIM7-204ENST00000393546 J3KRW8 73 aa13.67□□□□□ -0.22
PDLIM7-204ENST00000393546 TPT1P13693 172 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-204ENST00000393546 KIR3DS1Q14943 382 aa13.67□□□□□ -0.22
PDLIM7-204ENST00000393546 LOC102723971A0A1B0GUV8 181 aa13.66□□□□□ -0.22
PDLIM7-204ENST00000393546 ZNF705GA8MUZ8 300 aaPredicted RBP13.66□□□□□ -0.22
PDLIM7-204ENST00000393546 UMAD1C9J7I0 102 aa13.66□□□□□ -0.22
PDLIM7-204ENST00000393546 ZNF138P52744 262 aa13.66□□□□□ -0.22
PDLIM7-204ENST00000393546 EMP1P54849 157 aa13.66□□□□□ -0.22
PDLIM7-204ENST00000393546 GFI1BQ5VTD9 330 aa13.66□□□□□ -0.22
PDLIM7-204ENST00000393546 FAM19A4Q96LR4 140 aa13.66□□□□□ -0.22
PDLIM7-204ENST00000393546 ZNF492Q9P255 531 aa13.66□□□□□ -0.22
PDLIM7-204ENST00000393546 RPH3ALQ9UNE2 315 aa13.66□□□□□ -0.22
PDLIM7-204ENST00000393546 A0A1B0GVG6 124 aa13.65□□□□□ -0.22
PDLIM7-204ENST00000393546 H7BYZ3 331 aa13.65□□□□□ -0.22
PDLIM7-204ENST00000393546 NMBP08949 121 aa13.65□□□□□ -0.22
PDLIM7-204ENST00000393546 TAS2R60P59551 318 aa13.65□□□□□ -0.22
PDLIM7-204ENST00000393546 STOML3Q8TAV4 291 aa13.65□□□□□ -0.22
PDLIM7-204ENST00000393546 TRAV12-3A0A0B4J271 114 aa13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 MAP1LC3B2A6NCE7 125 aa13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 NUPR2A6NF83 97 aa13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 GPX1P07203 203 aa13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 SPART-AS1P0CW21 52 aa13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 HTN1P15515 57 aa13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 CRISP2P16562 243 aa13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 FGF8P55075 233 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 SUMO1P63165 101 aaKnown RBP13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 CEMP1Q6PRD7 247 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 PHLDA1Q8WV24 401 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 NIPSNAP3BQ9BS92 247 aa13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 MAP1LC3BQ9GZQ8 125 aa13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 TMPRSS5Q9H3S3 457 aa13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 PLA2G2EQ9NZK7 142 aa13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 CSMD3Q7Z407 3707 aa13.64□□□□□ -0.23
PDLIM7-204ENST00000393546 TRBV7-9A0A0J9YWB2 115 aa13.63□□□□□ -0.23
PDLIM7-204ENST00000393546 A0A1W2PRE2 83 aa13.63□□□□□ -0.23
PDLIM7-204ENST00000393546 KLLNB2CW77 178 aa13.63□□□□□ -0.23
PDLIM7-204ENST00000393546 PRM2P04554 102 aa13.63□□□□□ -0.23
PDLIM7-204ENST00000393546 RNASE4P34096 147 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-204ENST00000393546 FHITP49789 147 aa13.63□□□□□ -0.23
PDLIM7-204ENST00000393546 EIF5AL1Q6IS14 154 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-204ENST00000393546 DPPA3Q6W0C5 159 aa13.63□□□□□ -0.23
PDLIM7-204ENST00000393546 GOLT1AQ6ZVE7 132 aa13.63□□□□□ -0.23
PDLIM7-204ENST00000393546 C5orf17Q8NAS9 161 aa13.63□□□□□ -0.23
PDLIM7-204ENST00000393546 TMED6Q8WW62 240 aa13.63□□□□□ -0.23
PDLIM7-204ENST00000393546 CELA1Q9UNI1 258 aa13.63□□□□□ -0.23
PDLIM7-204ENST00000393546 TEX48A0A1B0GUV7 120 aa13.62□□□□□ -0.23
PDLIM7-204ENST00000393546 C7orf71A4D174 169 aa13.62□□□□□ -0.23
PDLIM7-204ENST00000393546 AZU1P20160 251 aa13.62□□□□□ -0.23
PDLIM7-204ENST00000393546 CD300CQ08708 224 aa13.62□□□□□ -0.23
PDLIM7-204ENST00000393546 ZFP69Q49AA0 526 aa13.62□□□□□ -0.23
PDLIM7-204ENST00000393546 FAM213BQ8TBF2 198 aa13.62□□□□□ -0.23
PDLIM7-204ENST00000393546 KLK5Q9Y337 293 aaPredicted RBP13.62□□□□□ -0.23
PDLIM7-204ENST00000393546 YTHDF2Q9Y5A9 579 aaKnown RBP13.62□□□□□ -0.23
PDLIM7-204ENST00000393546 LENEPQ9Y5L5 61 aa13.62□□□□□ -0.23
PDLIM7-204ENST00000393546 SERTM2A0A1B0GWG4 89 aa13.61□□□□□ -0.23
PDLIM7-204ENST00000393546 GNG5P63218 68 aa13.61□□□□□ -0.23
PDLIM7-204ENST00000393546 SLC51BQ86UW2 128 aa13.61□□□□□ -0.23
PDLIM7-204ENST00000393546 CCDC28AQ8IWP9 274 aa13.61□□□□□ -0.23
PDLIM7-204ENST00000393546 ZFAND2AQ8N6M9 145 aa13.61□□□□□ -0.23
PDLIM7-204ENST00000393546 Q8TAT8 98 aa13.61□□□□□ -0.23
PDLIM7-204ENST00000393546 MBD3L1Q8WWY6 194 aa13.61□□□□□ -0.23
PDLIM7-204ENST00000393546 DKK2Q9UBU2 259 aa13.61□□□□□ -0.23
PDLIM7-204ENST00000393546 EPDR1Q9UM22 224 aa13.61□□□□□ -0.23
PDLIM7-204ENST00000393546 STARD9Q9P2P6 4700 aa13.6□□□□□ -0.23
PDLIM7-204ENST00000393546 C11orf94C9JXX5 98 aa13.6□□□□□ -0.23
PDLIM7-204ENST00000393546 K7EQM0 130 aa13.6□□□□□ -0.23
PDLIM7-204ENST00000393546 UBE2G2P60604 165 aa13.6□□□□□ -0.23
PDLIM7-204ENST00000393546 BTN1A1Q13410 526 aa13.6□□□□□ -0.23
PDLIM7-204ENST00000393546 C12orf74Q32Q52 190 aa13.6□□□□□ -0.23
PDLIM7-204ENST00000393546 FAM222AQ5U5X8 452 aa13.6□□□□□ -0.23
PDLIM7-204ENST00000393546 ZNF493Q6ZR52 646 aa13.6□□□□□ -0.23
PDLIM7-204ENST00000393546 SFT2D1Q8WV19 159 aa13.6□□□□□ -0.23
PDLIM7-204ENST00000393546 C16orf74Q96GX8 76 aa13.6□□□□□ -0.23
PDLIM7-204ENST00000393546 PYGO2Q9BRQ0 406 aa13.6□□□□□ -0.23
PDLIM7-204ENST00000393546 NKX6-2Q9C056 277 aaPredicted RBP13.6□□□□□ -0.23
PDLIM7-204ENST00000393546 GGTLC3B5MD39 225 aa13.59□□□□□ -0.23
PDLIM7-204ENST00000393546 ZNF324O75467 553 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-204ENST00000393546 TCRAP04437 139 aa13.59□□□□□ -0.23
PDLIM7-204ENST00000393546 Q6ZTC4 211 aa13.59□□□□□ -0.23
PDLIM7-204ENST00000393546 C9orf62Q8N4C0 152 aa13.59□□□□□ -0.23
PDLIM7-204ENST00000393546 TENM2Q9NT68 2774 aa13.58□□□□□ -0.24
PDLIM7-204ENST00000393546 IFNA7P01567 189 aa13.58□□□□□ -0.24
PDLIM7-204ENST00000393546 H2AFB1P0C5Y9 115 aa13.58□□□□□ -0.24
PDLIM7-204ENST00000393546 RAB5CP51148 216 aa13.58□□□□□ -0.24
PDLIM7-204ENST00000393546 ZNF767PQ75MW2 155 aa13.58□□□□□ -0.24
PDLIM7-204ENST00000393546 TMEM263Q8WUH6 116 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-204ENST00000393546 TRAV8-1A0A0A6YYK1 113 aa13.57□□□□□ -0.24
PDLIM7-204ENST00000393546 TRAV10A0A0B4J240 114 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms