RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 HIST2H3AQ71DI3 136 aa-5.43□□□□□ -3.28
TRAJ42-201ENST00000390495 EIF3MQ7L2H7 374 aaKnown RBP-5.43□□□□□ -3.28
TRAJ42-201ENST00000390495 SYS1Q8N2H4 156 aa-5.43□□□□□ -3.28
TRAJ42-201ENST00000390495 TCTEX1D1Q8N7M0 179 aa-5.43□□□□□ -3.28
TRAJ42-201ENST00000390495 OR6N2Q8NGY6 317 aa-5.43□□□□□ -3.28
TRAJ42-201ENST00000390495 STMN3Q9NZ72 180 aa-5.43□□□□□ -3.28
TRAJ42-201ENST00000390495 LRPPRCP42704 1394 aaKnown RBP-5.43□□□□□ -3.28
TRAJ42-201ENST00000390495 TRGV10A0A0A0MS01 117 aa-5.44□□□□□ -3.28
TRAJ42-201ENST00000390495 K7EPI3 171 aa-5.44□□□□□ -3.28
TRAJ42-201ENST00000390495 MPHOSPH10O00566 681 aaKnown RBP-5.44□□□□□ -3.28
TRAJ42-201ENST00000390495 MFSD11O43934 449 aa-5.44□□□□□ -3.28
TRAJ42-201ENST00000390495 WBP4O75554 376 aaKnown RBP-5.44□□□□□ -3.28
TRAJ42-201ENST00000390495 IGKCP01834 107 aa-5.44□□□□□ -3.28
TRAJ42-201ENST00000390495 AESQ08117 197 aa-5.44□□□□□ -3.28
TRAJ42-201ENST00000390495 SMAGPQ0VAQ4 97 aa-5.44□□□□□ -3.28
TRAJ42-201ENST00000390495 C22orf39Q6P5X5 142 aa-5.44□□□□□ -3.28
TRAJ42-201ENST00000390495 IZUMO2Q6UXV1 221 aa-5.44□□□□□ -3.28
TRAJ42-201ENST00000390495 LINC00269Q8N2A0 174 aa-5.44□□□□□ -3.28
TRAJ42-201ENST00000390495 RIBC1Q8N443 379 aaPredicted RBP-5.44□□□□□ -3.28
TRAJ42-201ENST00000390495 CHCHD1Q96BP2 118 aaKnown RBP-5.44□□□□□ -3.28
TRAJ42-201ENST00000390495 TMEM126AQ9H061 195 aa-5.44□□□□□ -3.28
TRAJ42-201ENST00000390495 BBIP1A8MTZ0 92 aa-5.45□□□□□ -3.28
TRAJ42-201ENST00000390495 CFAP126Q5VTH2 177 aa-5.45□□□□□ -3.28
TRAJ42-201ENST00000390495 OR5AK3PQ8NH89 298 aa-5.45□□□□□ -3.28
TRAJ42-201ENST00000390495 FAM96AQ9H5X1 160 aa-5.45□□□□□ -3.28
TRAJ42-201ENST00000390495 EURLQ9NYK6 297 aa-5.45□□□□□ -3.28
TRAJ42-201ENST00000390495 FAM159BA6NKW6 160 aa-5.46□□□□□ -3.28
TRAJ42-201ENST00000390495 CAPZBP47756 277 aa-5.46□□□□□ -3.28
TRAJ42-201ENST00000390495 VMA21Q3ZAQ7 101 aa-5.46□□□□□ -3.28
TRAJ42-201ENST00000390495 FBXO48Q5FWF7 155 aa-5.46□□□□□ -3.28
TRAJ42-201ENST00000390495 JOSD2Q8TAC2 188 aa-5.46□□□□□ -3.28
TRAJ42-201ENST00000390495 NPVFQ9HCQ7 196 aa-5.46□□□□□ -3.28
TRAJ42-201ENST00000390495 C1orf196B1AJZ1 125 aa-5.47□□□□□ -3.29
TRAJ42-201ENST00000390495 SYS1-DBNDD2H3BUS1 97 aa-5.47□□□□□ -3.29
TRAJ42-201ENST00000390495 BCL2P10415 239 aa-5.47□□□□□ -3.29
TRAJ42-201ENST00000390495 STMN1P16949 149 aa-5.47□□□□□ -3.29
TRAJ42-201ENST00000390495 DEFA1P59665 94 aa-5.47□□□□□ -3.29
TRAJ42-201ENST00000390495 MYL5Q02045 173 aa-5.47□□□□□ -3.29
TRAJ42-201ENST00000390495 C20orf196Q8IYI0 205 aa-5.47□□□□□ -3.29
TRAJ42-201ENST00000390495 BCL7BQ9BQE9 202 aa-5.47□□□□□ -3.29
TRAJ42-201ENST00000390495 C11orf68Q9H3H3 251 aaKnown RBP-5.47□□□□□ -3.29
TRAJ42-201ENST00000390495 FBXL12Q9NXK8 326 aa-5.47□□□□□ -3.29
TRAJ42-201ENST00000390495 CYSLTR1Q9Y271 337 aa-5.47□□□□□ -3.29
TRAJ42-201ENST00000390495 OR10A3P58181 314 aa-5.48□□□□□ -3.29
TRAJ42-201ENST00000390495 GOLT1AQ6ZVE7 132 aa-5.48□□□□□ -3.29
TRAJ42-201ENST00000390495 C4orf33Q8N1A6 199 aa-5.48□□□□□ -3.29
TRAJ42-201ENST00000390495 TEX29Q8N6K0 151 aa-5.48□□□□□ -3.29
TRAJ42-201ENST00000390495 AP1M2Q9Y6Q5 423 aa-5.48□□□□□ -3.29
TRAJ42-201ENST00000390495 MAGI1Q96QZ7 1491 aaPredicted RBP-5.49□□□□□ -3.29
TRAJ42-201ENST00000390495 TMEM94Q12767 1356 aa-5.49□□□□□ -3.29
TRAJ42-201ENST00000390495 APOC1P02654 83 aa-5.49□□□□□ -3.29
TRAJ42-201ENST00000390495 COX8AP10176 69 aa-5.49□□□□□ -3.29
TRAJ42-201ENST00000390495 IL7P13232 177 aa-5.49□□□□□ -3.29
TRAJ42-201ENST00000390495 MRPL52Q86TS9 123 aaKnown RBP-5.49□□□□□ -3.29
TRAJ42-201ENST00000390495 TIPINQ9BVW5 301 aa-5.49□□□□□ -3.29
TRAJ42-201ENST00000390495 ENY2Q9NPA8 101 aa-5.49□□□□□ -3.29
TRAJ42-201ENST00000390495 V9GYV3 84 aa-5.49□□□□□ -3.29
TRAJ42-201ENST00000390495 SBF2Q86WG5 1849 aa-5.49□□□□□ -3.29
TRAJ42-201ENST00000390495 TRAV1-2A0A0B4J238 106 aa-5.5□□□□□ -3.29
TRAJ42-201ENST00000390495 SMR3BP02814 79 aaPredicted RBP-5.5□□□□□ -3.29
TRAJ42-201ENST00000390495 SERPINE1P05121 402 aa-5.5□□□□□ -3.29
TRAJ42-201ENST00000390495 ATP5IP56385 69 aaPredicted RBP-5.5□□□□□ -3.29
TRAJ42-201ENST00000390495 PIGPP57054 158 aa-5.5□□□□□ -3.29
TRAJ42-201ENST00000390495 OR4B1Q8NGF8 309 aa-5.5□□□□□ -3.29
TRAJ42-201ENST00000390495 GLYATL2Q8WU03 294 aa-5.5□□□□□ -3.29
TRAJ42-201ENST00000390495 CCDC12Q8WUD4 166 aaPredicted RBP-5.5□□□□□ -3.29
TRAJ42-201ENST00000390495 IFT81Q8WYA0 676 aa-5.5□□□□□ -3.29
TRAJ42-201ENST00000390495 DKKL1Q9UK85 242 aa-5.5□□□□□ -3.29
TRAJ42-201ENST00000390495 ZMYM4Q5VZL5 1548 aa-5.5□□□□□ -3.29
TRAJ42-201ENST00000390495 COPS6Q7L5N1 327 aa-5.51□□□□□ -3.29
TRAJ42-201ENST00000390495 OR10X1Q8NGY0 326 aa-5.51□□□□□ -3.29
TRAJ42-201ENST00000390495 RASD2Q96D21 266 aa-5.51□□□□□ -3.29
TRAJ42-201ENST00000390495 RSPH9Q9H1X1 276 aaPredicted RBP-5.51□□□□□ -3.29
TRAJ42-201ENST00000390495 RMND1Q9NWS8 449 aa-5.51□□□□□ -3.29
TRAJ42-201ENST00000390495 NUBP2Q9Y5Y2 271 aa-5.51□□□□□ -3.29
TRAJ42-201ENST00000390495 CPSF4LA6NMK7 179 aaKnown RBP-5.52□□□□□ -3.29
TRAJ42-201ENST00000390495 COQ5Q5HYK3 327 aa-5.52□□□□□ -3.29
TRAJ42-201ENST00000390495 OR5A2Q8NGI9 324 aa-5.52□□□□□ -3.29
TRAJ42-201ENST00000390495 TSEN15Q8WW01 171 aaKnown RBP-5.52□□□□□ -3.29
TRAJ42-201ENST00000390495 NAA60Q9H7X0 242 aa-5.52□□□□□ -3.29
TRAJ42-201ENST00000390495 SPANXB1Q9NS25 103 aaPredicted RBP-5.52□□□□□ -3.29
TRAJ42-201ENST00000390495 AHSPQ9NZD4 102 aa-5.52□□□□□ -3.29
TRAJ42-201ENST00000390495 SPTAN1Q13813 2472 aaKnown RBP-5.52□□□□□ -3.29
TRAJ42-201ENST00000390495 DAPL1A0PJW8 107 aa-5.53□□□□□ -3.29
TRAJ42-201ENST00000390495 SRP14P37108 136 aaKnown RBP-5.53□□□□□ -3.29
TRAJ42-201ENST00000390495 PEX19P40855 299 aa-5.53□□□□□ -3.29
TRAJ42-201ENST00000390495 SSBP1Q04837 148 aaKnown RBP-5.53□□□□□ -3.29
TRAJ42-201ENST00000390495 Q5VV11 94 aa-5.53□□□□□ -3.29
TRAJ42-201ENST00000390495 EXO5Q9H790 373 aa-5.53□□□□□ -3.29
TRAJ42-201ENST00000390495 MED11Q9P086 117 aa-5.53□□□□□ -3.29
TRAJ42-201ENST00000390495 EXOC1LA0A1B0GW35 172 aa-5.54□□□□□ -3.3
TRAJ42-201ENST00000390495 A0A1B0GW64 132 aa-5.54□□□□□ -3.3
TRAJ42-201ENST00000390495 CCL3L1P16619 93 aa-5.54□□□□□ -3.3
TRAJ42-201ENST00000390495 ATP6V1E1P36543 226 aa-5.54□□□□□ -3.3
TRAJ42-201ENST00000390495 RHOHQ15669 191 aa-5.54□□□□□ -3.3
TRAJ42-201ENST00000390495 SPANXN2Q5MJ10 180 aa-5.54□□□□□ -3.3
TRAJ42-201ENST00000390495 STOML3Q8TAV4 291 aa-5.54□□□□□ -3.3
TRAJ42-201ENST00000390495 SPTBN5Q9NRC6 3674 aaKnown RBP-5.54□□□□□ -3.3
TRAJ42-201ENST00000390495 ARL5CA6NH57 179 aa-5.55□□□□□ -3.3
TRAJ42-201ENST00000390495 CNIH1O95406 144 aa-5.55□□□□□ -3.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms