RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 HIST1H2BAQ96A08 127 aa10.13□□□□□ -0.79
PRPF18-202ENST00000378572 RPUSD4Q96CM3 377 aaKnown RBP10.13□□□□□ -0.79
PRPF18-202ENST00000378572 NRN1Q9NPD7 142 aa10.13□□□□□ -0.79
PRPF18-202ENST00000378572 SOHLH1Q5JUK2 328 aa10.12□□□□□ -0.79
PRPF18-202ENST00000378572 PRELID1Q9Y255 219 aa10.12□□□□□ -0.79
PRPF18-202ENST00000378572 SCO2A0A1W2PP80 73 aa10.11□□□□□ -0.79
PRPF18-202ENST00000378572 SOCS3O14543 225 aa10.11□□□□□ -0.79
PRPF18-202ENST00000378572 SLC25A5P05141 298 aaKnown RBP10.11□□□□□ -0.79
PRPF18-202ENST00000378572 ADCYAP1P18509 176 aa10.11□□□□□ -0.79
PRPF18-202ENST00000378572 FAM74A3Q4VXF1 159 aa10.11□□□□□ -0.79
PRPF18-202ENST00000378572 CEMP1Q6PRD7 247 aaPredicted RBP10.11□□□□□ -0.79
PRPF18-202ENST00000378572 APRG1Q8IVJ8 170 aa10.11□□□□□ -0.79
PRPF18-202ENST00000378572 EXOC3-AS1Q8N2X6 119 aa10.11□□□□□ -0.79
PRPF18-202ENST00000378572 MRPL53Q96EL3 112 aaKnown RBP10.11□□□□□ -0.79
PRPF18-202ENST00000378572 LINC00052Q96N35 136 aa10.11□□□□□ -0.79
PRPF18-202ENST00000378572 EPDR1Q9UM22 224 aa10.11□□□□□ -0.79
PRPF18-202ENST00000378572 CARHSP1Q9Y2V2 147 aaKnown RBP10.11□□□□□ -0.79
PRPF18-202ENST00000378572 KIR2DL5BA0A0G2JN68 375 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 KIR2DL5BA0A0G2JPC4 375 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 F8W036 122 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 WFDC3Q8IUB2 231 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 KIR2DL5AQ8N109 375 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 KIR2DL5BQ8NHK3 375 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 CMTM2Q8TAZ6 248 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 C2CD4CQ8TF44 421 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 RNF183Q96D59 192 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 TRAV2A0A0B4J234 112 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 SERTM2A0A1B0GWG4 89 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 PEX7O00628 323 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 ISLRO14498 428 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 GBGT1Q8N5D6 347 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 DCANP1Q8TF63 244 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 ATG101Q9BSB4 218 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 PARLQ9H300 379 aa10.1□□□□□ -0.79
PRPF18-202ENST00000378572 TRAV8-2A0A0B4J237 113 aa10.09□□□□□ -0.79
PRPF18-202ENST00000378572 TCRAP04437 139 aa10.09□□□□□ -0.79
PRPF18-202ENST00000378572 CSN1S1P47710 185 aa10.09□□□□□ -0.79
PRPF18-202ENST00000378572 RPL11P62913 178 aaKnown RBP10.09□□□□□ -0.79
PRPF18-202ENST00000378572 ZNF124Q15973 351 aa10.09□□□□□ -0.79
PRPF18-202ENST00000378572 C16orf92Q96LL3 132 aa10.09□□□□□ -0.79
PRPF18-202ENST00000378572 MAP6D1Q9H9H5 199 aa10.09□□□□□ -0.79
PRPF18-202ENST00000378572 S100A9P06702 114 aaKnown RBP10.08□□□□□ -0.8
PRPF18-202ENST00000378572 AKR1C3P42330 323 aa10.08□□□□□ -0.8
PRPF18-202ENST00000378572 CEBPGP53567 150 aa10.08□□□□□ -0.8
PRPF18-202ENST00000378572 PAFAH1B2P68402 229 aa10.08□□□□□ -0.8
PRPF18-202ENST00000378572 SMIM7Q9BQ49 75 aa10.08□□□□□ -0.8
PRPF18-202ENST00000378572 MS4A6AQ9H2W1 248 aa10.08□□□□□ -0.8
PRPF18-202ENST00000378572 KLF12Q9Y4X4 402 aa10.08□□□□□ -0.8
PRPF18-202ENST00000378572 ZNF727A8MUV8 499 aa10.07□□□□□ -0.8
PRPF18-202ENST00000378572 C9JCJ5 164 aa10.07□□□□□ -0.8
PRPF18-202ENST00000378572 DIRC3C9JPN6 131 aa10.07□□□□□ -0.8
PRPF18-202ENST00000378572 K7EQG2 157 aa10.07□□□□□ -0.8
PRPF18-202ENST00000378572 M0R3E3 92 aa10.07□□□□□ -0.8
PRPF18-202ENST00000378572 ID1P41134 155 aa10.07□□□□□ -0.8
PRPF18-202ENST00000378572 CNN1P51911 297 aaKnown RBP10.07□□□□□ -0.8
PRPF18-202ENST00000378572 TAS2R60P59551 318 aa10.07□□□□□ -0.8
PRPF18-202ENST00000378572 GNG5P63218 68 aa10.07□□□□□ -0.8
PRPF18-202ENST00000378572 PSG3Q16557 428 aa10.07□□□□□ -0.8
PRPF18-202ENST00000378572 PHLDA1Q8WV24 401 aaPredicted RBP10.07□□□□□ -0.8
PRPF18-202ENST00000378572 FBLL1A6NHQ2 334 aaKnown RBP10.07□□□□□ -0.8
PRPF18-202ENST00000378572 K7EQM0 130 aa10.07□□□□□ -0.8
PRPF18-202ENST00000378572 RPL35P42766 123 aaKnown RBP10.07□□□□□ -0.8
PRPF18-202ENST00000378572 CMC4P56277 68 aaPredicted RBP10.07□□□□□ -0.8
PRPF18-202ENST00000378572 TMEM183BQ1AE95 376 aa10.07□□□□□ -0.8
PRPF18-202ENST00000378572 NIPSNAP3BQ9BS92 247 aa10.07□□□□□ -0.8
PRPF18-202ENST00000378572 DERL1Q9BUN8 251 aa10.07□□□□□ -0.8
PRPF18-202ENST00000378572 CSTL1Q9H114 145 aa10.07□□□□□ -0.8
PRPF18-202ENST00000378572 TRBV6-1A0A0K0K1D8 114 aa10.06□□□□□ -0.8
PRPF18-202ENST00000378572 DNASE2O00115 360 aaPredicted RBP10.06□□□□□ -0.8
PRPF18-202ENST00000378572 FMC1Q96HJ9 113 aa10.06□□□□□ -0.8
PRPF18-202ENST00000378572 NAT8Q9UHE5 227 aa10.06□□□□□ -0.8
PRPF18-202ENST00000378572 LY96Q9Y6Y9 160 aa10.06□□□□□ -0.8
PRPF18-202ENST00000378572 RBAKDNA6NC62 111 aa10.05□□□□□ -0.8
PRPF18-202ENST00000378572 CA1P00915 261 aaPredicted RBP10.05□□□□□ -0.8
PRPF18-202ENST00000378572 APOC3P02656 99 aa10.05□□□□□ -0.8
PRPF18-202ENST00000378572 HLA-DMBP28068 263 aa10.05□□□□□ -0.8
PRPF18-202ENST00000378572 PNRC1Q12796 327 aaPredicted RBP10.05□□□□□ -0.8
PRPF18-202ENST00000378572 ZNF674Q2M3X9 581 aa10.05□□□□□ -0.8
PRPF18-202ENST00000378572 IGFL4Q6B9Z1 124 aa10.05□□□□□ -0.8
PRPF18-202ENST00000378572 SVBPQ8N300 66 aa10.05□□□□□ -0.8
PRPF18-202ENST00000378572 TMEM75Q8N9X5 138 aa10.05□□□□□ -0.8
PRPF18-202ENST00000378572 NANOS2P60321 138 aaKnown RBP10.04□□□□□ -0.8
PRPF18-202ENST00000378572 UBE2G1P62253 170 aa10.04□□□□□ -0.8
PRPF18-202ENST00000378572 TMEM241Q24JQ0 296 aa10.04□□□□□ -0.8
PRPF18-202ENST00000378572 GOLT1AQ6ZVE7 132 aa10.04□□□□□ -0.8
PRPF18-202ENST00000378572 RNF182Q8N6D2 247 aa10.04□□□□□ -0.8
PRPF18-202ENST00000378572 OR11H2Q8NH07 326 aa10.04□□□□□ -0.8
PRPF18-202ENST00000378572 TVP23CQ96ET8 276 aa10.04□□□□□ -0.8
PRPF18-202ENST00000378572 SMIM12Q96EX1 92 aa10.04□□□□□ -0.8
PRPF18-202ENST00000378572 IGF2BP2-AS1Q96M15 143 aa10.04□□□□□ -0.8
PRPF18-202ENST00000378572 SDF2L1Q9HCN8 221 aa10.04□□□□□ -0.8
PRPF18-202ENST00000378572 RPH3ALQ9UNE2 315 aa10.04□□□□□ -0.8
PRPF18-202ENST00000378572 TRBV20OR9-2A0A075B6H5 130 aa10.04□□□□□ -0.8
PRPF18-202ENST00000378572 SNRPD3P62318 126 aaKnown RBP10.04□□□□□ -0.8
PRPF18-202ENST00000378572 C11orf45Q8TAV5 145 aa10.04□□□□□ -0.8
PRPF18-202ENST00000378572 C20orf173Q96LM9 149 aa10.04□□□□□ -0.8
PRPF18-202ENST00000378572 ZNF705FA8MVS1 300 aaPredicted RBP10.03□□□□□ -0.8
PRPF18-202ENST00000378572 DEFB4AO15263 64 aa10.03□□□□□ -0.8
PRPF18-202ENST00000378572 IGLV2-11P01706 119 aa10.03□□□□□ -0.8
PRPF18-202ENST00000378572 FLI1Q01543 452 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms