RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 MINOS1-NBL1R4GNA1 71 aa9.64□□□□□ -0.87
PCDHA9-201ENST00000378122 A0A1W2PPI3 338 aa9.64□□□□□ -0.87
PCDHA9-201ENST00000378122 H3BMM0 161 aa9.64□□□□□ -0.87
PCDHA9-201ENST00000378122 MGAMO43451 1857 aa9.64□□□□□ -0.87
PCDHA9-201ENST00000378122 UBE2WQ96B02 151 aa9.64□□□□□ -0.87
PCDHA9-201ENST00000378122 ZNF114Q8NC26 417 aa9.64□□□□□ -0.87
PCDHA9-201ENST00000378122 USF3Q68DE3 2245 aa9.64□□□□□ -0.87
PCDHA9-201ENST00000378122 IGKV1OR2-108A0A075B7D4 117 aa9.64□□□□□ -0.87
PCDHA9-201ENST00000378122 CLPSL1A2RUU4 121 aa9.64□□□□□ -0.87
PCDHA9-201ENST00000378122 SLX1AQ9BQ83 275 aa9.63□□□□□ -0.87
PCDHA9-201ENST00000378122 TRAV26-2A0A0B4J265 109 aa9.63□□□□□ -0.87
PCDHA9-201ENST00000378122 LINC01619G3V211 115 aa9.63□□□□□ -0.87
PCDHA9-201ENST00000378122 IGLL1P15814 213 aa9.63□□□□□ -0.87
PCDHA9-201ENST00000378122 UBE2E1P51965 193 aa9.63□□□□□ -0.87
PCDHA9-201ENST00000378122 FAM223BA6NKX1 122 aa9.63□□□□□ -0.87
PCDHA9-201ENST00000378122 M0R1W7 72 aa9.63□□□□□ -0.87
PCDHA9-201ENST00000378122 FAM223AQ8IWN6 122 aa9.63□□□□□ -0.87
PCDHA9-201ENST00000378122 IGHV3-38A0A0C4DH36 116 aa9.63□□□□□ -0.87
PCDHA9-201ENST00000378122 DEFB131AP59861 70 aa9.63□□□□□ -0.87
PCDHA9-201ENST00000378122 TMEM14BQ9NUH8 114 aa9.63□□□□□ -0.87
PCDHA9-201ENST00000378122 THSD7BQ9C0I4 1608 aa9.63□□□□□ -0.87
PCDHA9-201ENST00000378122 GVINP1Q7Z2Y8 2422 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 MYMXA0A1B0GTQ4 84 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 C22orf46C9J442 243 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 PRSS46E5RG02 174 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 GAGE7O76087 117 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 GAGE12FP0CL80 117 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 GAGE12GP0CL81 117 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 GAGE12IP0CL82 117 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 IGHV4-4A0A075B6R2 117 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 K7EP13 123 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 ARTNQ5T4W7 220 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 C9orf153Q5TBE3 101 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 KLK9Q9UKQ9 250 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 PLXND1Q9Y4D7 1925 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 F8WEM9 126 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 IGKV1-39P01597 117 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 IGKV1D-39P04432 117 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 COX8AP10176 69 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 BVES-AS1Q5T3Y7 98 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 CEND1Q8N111 149 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 PLXNA2O75051 1894 aa9.62□□□□□ -0.87
PCDHA9-201ENST00000378122 DKK1O94907 266 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 IGF2BP2-AS1Q96M15 143 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 NLRC5Q86WI3 1866 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 PLXNA4Q9HCM2 1894 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 TRAV25A0A0B4J276 109 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 K7ERJ3 54 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 TP53TG1Q9Y2A0 90 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 ACACAQ13085 2346 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 RPL36AP83881 106 aaKnown RBP9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 DUX4L9Q6RFH8 374 aaPredicted RBP9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 RPL36ALQ969Q0 106 aaKnown RBP9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 ZNF524Q96C55 264 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 OVOL2Q9BRP0 275 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 RLFQ13129 1914 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 MRPL51Q4U2R6 128 aaKnown RBP9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 C6orf226Q5I0X4 101 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 THAP8Q8NA92 274 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 A0A1W2PPM0 123 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 F8W1H4 67 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 Q8N8P6 123 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 WDR81Q562E7 1941 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 TICRRQ7Z2Z1 1910 aa9.61□□□□□ -0.87
PCDHA9-201ENST00000378122 TRAV12-2A0A075B6T6 113 aa9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 GAGE12JA6NER3 117 aa9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 YPEL3P61236 119 aaPredicted RBP9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 GAGE4Q13068 117 aa9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 GAGE5Q13069 117 aa9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 FAM104BQ5XKR9 115 aa9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 HAPLN4Q86UW8 402 aa9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 RHPN1-AS1Q9BWJ2 59 aa9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 TMEM126AQ9H061 195 aa9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 HELZP42694 1942 aaKnown RBP9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 ZNF561-AS1K7EIQ3 104 aa9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 DEFB136Q30KP8 78 aa9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 NDUFA4L2Q9NRX3 87 aa9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 WIPF3A6NGB9 483 aa9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 WDR86Q86TI4 376 aa9.6□□□□□ -0.87
PCDHA9-201ENST00000378122 OOSP1A8MZH6 123 aa9.59□□□□□ -0.87
PCDHA9-201ENST00000378122 VWC2LB2RUY7 222 aa9.59□□□□□ -0.87
PCDHA9-201ENST00000378122 GRNP28799 593 aaKnown RBP9.59□□□□□ -0.87
PCDHA9-201ENST00000378122 ZNF833PQ6ZTB9 187 aa9.59□□□□□ -0.87
PCDHA9-201ENST00000378122 C1orf147Q96MC9 270 aaPredicted RBP9.59□□□□□ -0.87
PCDHA9-201ENST00000378122 IGKV2D-24A0A075B6R9 120 aa9.59□□□□□ -0.87
PCDHA9-201ENST00000378122 C17orf58Q2M2W7 97 aa9.59□□□□□ -0.87
PCDHA9-201ENST00000378122 UBE2BP63146 152 aa9.59□□□□□ -0.87
PCDHA9-201ENST00000378122 TIMM17AQ99595 171 aa9.59□□□□□ -0.87
PCDHA9-201ENST00000378122 K7EN84 100 aa9.59□□□□□ -0.88
PCDHA9-201ENST00000378122 TRPT1Q86TN4 253 aaKnown RBP9.59□□□□□ -0.88
PCDHA9-201ENST00000378122 C1QTNF4Q9BXJ3 329 aa9.59□□□□□ -0.88
PCDHA9-201ENST00000378122 NOTCH3Q9UM47 2321 aa9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 ZNF503-AS2A6NEH8 195 aa9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 ATP6V0BQ99437 205 aa9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 DEFB4AO15263 64 aa9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 NXPH4O95158 308 aa9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 SPINK13Q1W4C9 94 aa9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 USMG5Q96IX5 58 aa9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 LRRK1Q38SD2 2015 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms