RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 F5H768 121 aa8.21□□□□□ -1.1
SMARCE1-203ENST00000377808 P0DMU3 169 aa8.21□□□□□ -1.1
SMARCE1-203ENST00000377808 FAM231AP0DMU4 169 aa8.21□□□□□ -1.1
SMARCE1-203ENST00000377808 FAM231CP0DMU5 169 aa8.21□□□□□ -1.1
SMARCE1-203ENST00000377808 BTN1A1Q13410 526 aa8.21□□□□□ -1.1
SMARCE1-203ENST00000377808 ZNF266Q14584 549 aa8.21□□□□□ -1.1
SMARCE1-203ENST00000377808 TMEM88Q6PEY1 159 aa8.21□□□□□ -1.1
SMARCE1-203ENST00000377808 HSD17B11Q8NBQ5 300 aa8.21□□□□□ -1.1
SMARCE1-203ENST00000377808 Q9H3A6 140 aa8.21□□□□□ -1.1
SMARCE1-203ENST00000377808 RPH3ALQ9UNE2 315 aa8.21□□□□□ -1.1
SMARCE1-203ENST00000377808 FXYD6-FXYD2A0A087WZ82 144 aa8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 PLAC8L1A1L4L8 177 aa8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 SNURFLB1AK76 121 aa8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 HMGB3O15347 200 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 SLC25A5P05141 298 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 GPX1P07203 203 aa8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 GIPP09681 153 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 M6PRP20645 277 aa8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 RNASE4P34096 147 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 RAB2AP61019 212 aa8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 ZNF493Q6ZR52 646 aa8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 RNASE8Q8TDE3 154 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 HYLS1Q96M11 299 aa8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 LINC00477Q96M19 166 aa8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 VGLL1Q99990 258 aa8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 AGPAT4-IT1Q9H0P7 198 aa8.2□□□□□ -1.1
SMARCE1-203ENST00000377808 CBY3A6NI87 242 aa8.19□□□□□ -1.1
SMARCE1-203ENST00000377808 ATP5G1P05496 136 aa8.19□□□□□ -1.1
SMARCE1-203ENST00000377808 ATP5G3P48201 142 aa8.19□□□□□ -1.1
SMARCE1-203ENST00000377808 CD300CQ08708 224 aa8.19□□□□□ -1.1
SMARCE1-203ENST00000377808 Q5BKY6 102 aa8.19□□□□□ -1.1
SMARCE1-203ENST00000377808 INO80EQ8NBZ0 244 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-203ENST00000377808 OR10G4Q8NGN3 311 aa8.19□□□□□ -1.1
SMARCE1-203ENST00000377808 OR10G9Q8NGN4 311 aa8.19□□□□□ -1.1
SMARCE1-203ENST00000377808 OR10G7Q8NGN6 311 aa8.19□□□□□ -1.1
SMARCE1-203ENST00000377808 Q8TAT8 98 aa8.19□□□□□ -1.1
SMARCE1-203ENST00000377808 ZNF503Q96F45 646 aa8.19□□□□□ -1.1
SMARCE1-203ENST00000377808 FAM210BQ96KR6 192 aa8.19□□□□□ -1.1
SMARCE1-203ENST00000377808 AQP10Q96PS8 301 aa8.19□□□□□ -1.1
SMARCE1-203ENST00000377808 PYGO2Q9BRQ0 406 aa8.19□□□□□ -1.1
SMARCE1-203ENST00000377808 VPS13DQ5THJ4 4388 aa8.18□□□□□ -1.1
SMARCE1-203ENST00000377808 GAGE12BA1L429 117 aa8.18□□□□□ -1.1
SMARCE1-203ENST00000377808 RGS13O14921 159 aa8.18□□□□□ -1.1
SMARCE1-203ENST00000377808 GAGE7O76087 117 aa8.18□□□□□ -1.1
SMARCE1-203ENST00000377808 NUDT3O95989 172 aa8.18□□□□□ -1.1
SMARCE1-203ENST00000377808 GAGE12FP0CL80 117 aa8.18□□□□□ -1.1
SMARCE1-203ENST00000377808 GAGE12GP0CL81 117 aa8.18□□□□□ -1.1
SMARCE1-203ENST00000377808 GAGE12IP0CL82 117 aa8.18□□□□□ -1.1
SMARCE1-203ENST00000377808 FAM74A1Q5RGS3 127 aa8.18□□□□□ -1.1
SMARCE1-203ENST00000377808 C9orf47Q6ZRZ4 202 aa8.18□□□□□ -1.1
SMARCE1-203ENST00000377808 POM121L12Q8N7R1 296 aa8.18□□□□□ -1.1
SMARCE1-203ENST00000377808 OR2T35Q8NGX2 323 aa8.18□□□□□ -1.1
SMARCE1-203ENST00000377808 CMTM2Q8TAZ6 248 aa8.18□□□□□ -1.1
SMARCE1-203ENST00000377808 KLLNB2CW77 178 aa8.17□□□□□ -1.1
SMARCE1-203ENST00000377808 CDC34P49427 236 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-203ENST00000377808 ZNF138P52744 262 aa8.17□□□□□ -1.1
SMARCE1-203ENST00000377808 OR5I1Q13606 314 aa8.17□□□□□ -1.1
SMARCE1-203ENST00000377808 PQLC2Q6ZP29 291 aa8.17□□□□□ -1.1
SMARCE1-203ENST00000377808 LYPD1Q8N2G4 141 aa8.17□□□□□ -1.1
SMARCE1-203ENST00000377808 ASB13Q8WXK3 278 aa8.17□□□□□ -1.1
SMARCE1-203ENST00000377808 FAM19A4Q96LR4 140 aa8.17□□□□□ -1.1
SMARCE1-203ENST00000377808 ARPC5LQ9BPX5 153 aa8.17□□□□□ -1.1
SMARCE1-203ENST00000377808 ATG101Q9BSB4 218 aa8.17□□□□□ -1.1
SMARCE1-203ENST00000377808 ZNF492Q9P255 531 aa8.17□□□□□ -1.1
SMARCE1-203ENST00000377808 DNAH6Q9C0G6 4158 aa8.16□□□□□ -1.1
SMARCE1-203ENST00000377808 PGPA6NDG6 321 aa8.16□□□□□ -1.1
SMARCE1-203ENST00000377808 DIRC3C9JPN6 131 aa8.16□□□□□ -1.1
SMARCE1-203ENST00000377808 M0R2N4 97 aa8.16□□□□□ -1.1
SMARCE1-203ENST00000377808 CRISP2P16562 243 aa8.16□□□□□ -1.1
SMARCE1-203ENST00000377808 ATP6V0CP27449 155 aa8.16□□□□□ -1.1
SMARCE1-203ENST00000377808 PRR9Q5T870 116 aa8.16□□□□□ -1.1
SMARCE1-203ENST00000377808 IQCF2Q8IXL9 164 aa8.16□□□□□ -1.1
SMARCE1-203ENST00000377808 C15orf53Q8NAA6 179 aa8.16□□□□□ -1.1
SMARCE1-203ENST00000377808 ZNF680Q8NEM1 530 aa8.16□□□□□ -1.1
SMARCE1-203ENST00000377808 RXFP4Q8TDU9 374 aa8.16□□□□□ -1.1
SMARCE1-203ENST00000377808 SH3BGRL3Q9H299 93 aa8.16□□□□□ -1.1
SMARCE1-203ENST00000377808 OTORQ9NRC9 128 aa8.16□□□□□ -1.1
SMARCE1-203ENST00000377808 GSN-AS1Q9NRJ2 163 aa8.16□□□□□ -1.1
SMARCE1-203ENST00000377808 FRAS1Q86XX4 4008 aa8.15□□□□□ -1.1
SMARCE1-203ENST00000377808 IGLV2-18A0A075B6J9 118 aa8.15□□□□□ -1.1
SMARCE1-203ENST00000377808 BORCS7-ASMTA0A0B4J1R7 106 aa8.15□□□□□ -1.1
SMARCE1-203ENST00000377808 MBP02144 154 aa8.15□□□□□ -1.1
SMARCE1-203ENST00000377808 ARL14EPLP0DKL9 152 aa8.15□□□□□ -1.1
SMARCE1-203ENST00000377808 EIF4E3Q8N5X7 224 aaKnown RBP8.15□□□□□ -1.1
SMARCE1-203ENST00000377808 ZFAND2AQ8N6M9 145 aa8.15□□□□□ -1.1
SMARCE1-203ENST00000377808 PSMG3Q9BT73 122 aaPredicted RBP8.15□□□□□ -1.1
SMARCE1-203ENST00000377808 TRGV2A0A075B6R0 118 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 IGHV1OR15-1A0A075B7D0 117 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 TRGV1A0A0A0MS02 117 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 A0A0J9YY99 117 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 RBAKDNA6NC62 111 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 ZNF324O75467 553 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 GNG5P63218 68 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 MUC21Q5SSG8 566 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 RPL7L1Q6DKI1 246 aaKnown RBP8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 Q6ZQT7 251 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 Q6ZTI0 123 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 GOLT1AQ6ZVE7 132 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 OR2G3Q8NGZ4 309 aa8.14□□□□□ -1.11
SMARCE1-203ENST00000377808 RAB24Q969Q5 203 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms