RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 C8orf49Q96NF6 230 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 SMR3AQ99954 134 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 SLC50A1Q9BRV3 221 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 ZFP30Q9Y2G7 519 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 ACANP16112 2415 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 IGKV3-7A0A075B6H7 116 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 TRBV6-1A0A0K0K1D8 114 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 PRAC2D3DTV9 90 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 ELANEP08246 267 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 NPSP0C0P6 89 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 EDN2P20800 178 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 ACTL10Q5JWF8 245 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 VGLL1Q99990 258 aa9.87□□□□□ -0.83
TRIM40-206ENST00000376724 DAZ1Q9NQZ3 744 aaKnown RBP9.87□□□□□ -0.83
TRIM40-206ENST00000376724 TRAV9-1A0A075B6T8 112 aa9.86□□□□□ -0.83
TRIM40-206ENST00000376724 SERTM2A0A1B0GWG4 89 aa9.86□□□□□ -0.83
TRIM40-206ENST00000376724 A0A1W2PS18 150 aa9.86□□□□□ -0.83
TRIM40-206ENST00000376724 XKRY2A2RUG3 117 aa9.86□□□□□ -0.83
TRIM40-206ENST00000376724 C19orf71A6NCJ1 209 aa9.86□□□□□ -0.83
TRIM40-206ENST00000376724 CBLN1P23435 193 aa9.86□□□□□ -0.83
TRIM40-206ENST00000376724 MRPL54Q6P161 138 aaKnown RBP9.86□□□□□ -0.83
TRIM40-206ENST00000376724 Q8N2B8 174 aa9.86□□□□□ -0.83
TRIM40-206ENST00000376724 TMEM86BQ8N661 226 aa9.86□□□□□ -0.83
TRIM40-206ENST00000376724 Q8TAT8 98 aa9.86□□□□□ -0.83
TRIM40-206ENST00000376724 TMEM18Q96B42 140 aa9.86□□□□□ -0.83
TRIM40-206ENST00000376724 C16orf92Q96LL3 132 aa9.86□□□□□ -0.83
TRIM40-206ENST00000376724 RHPN1-AS1Q9BWJ2 59 aa9.86□□□□□ -0.83
TRIM40-206ENST00000376724 RPP21Q9H633 154 aaKnown RBP9.86□□□□□ -0.83
TRIM40-206ENST00000376724 ESM1Q9NQ30 184 aa9.86□□□□□ -0.83
TRIM40-206ENST00000376724 ZNF492Q9P255 531 aa9.86□□□□□ -0.83
TRIM40-206ENST00000376724 TRAV8-2A0A0B4J237 113 aa9.85□□□□□ -0.83
TRIM40-206ENST00000376724 IGHV7-4-1A0A0J9YVY3 117 aa9.85□□□□□ -0.83
TRIM40-206ENST00000376724 ERCC8Q13216 396 aa9.85□□□□□ -0.83
TRIM40-206ENST00000376724 KLHDC1Q8N7A1 406 aa9.85□□□□□ -0.83
TRIM40-206ENST00000376724 KIR2DL5BA0A0G2JN68 375 aa9.85□□□□□ -0.83
TRIM40-206ENST00000376724 KIR2DL5BA0A0G2JPC4 375 aa9.85□□□□□ -0.83
TRIM40-206ENST00000376724 TCF24Q7RTU0 167 aa9.85□□□□□ -0.83
TRIM40-206ENST00000376724 GPHB5Q86YW7 130 aa9.85□□□□□ -0.83
TRIM40-206ENST00000376724 KIR2DL5AQ8N109 375 aa9.85□□□□□ -0.83
TRIM40-206ENST00000376724 TSKUQ8WUA8 353 aa9.85□□□□□ -0.83
TRIM40-206ENST00000376724 IZUMO1RA6ND01 250 aa9.84□□□□□ -0.83
TRIM40-206ENST00000376724 HIGD1CA8MV81 97 aa9.84□□□□□ -0.83
TRIM40-206ENST00000376724 LGALS1P09382 135 aaKnown RBP9.84□□□□□ -0.83
TRIM40-206ENST00000376724 HIST2H2BDQ6DRA6 164 aa9.84□□□□□ -0.83
TRIM40-206ENST00000376724 Q6ZSV7 163 aa9.84□□□□□ -0.83
TRIM40-206ENST00000376724 NUP35Q8NFH5 326 aa9.84□□□□□ -0.83
TRIM40-206ENST00000376724 UBE2E2Q96LR5 201 aa9.84□□□□□ -0.83
TRIM40-206ENST00000376724 IGHV4OR15-8A0A075B7B6 117 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 A0A087WW49 117 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 SNURFLB1AK76 121 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 CT45A10P0DMU9 189 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 SRD5A1P18405 259 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 CRIP1P50238 77 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 RPL19P84098 196 aaKnown RBP9.83□□□□□ -0.84
TRIM40-206ENST00000376724 KHDC1LQ5JSQ8 128 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 C18orf65Q6ZTR6 163 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 OR2D3Q8NGH3 330 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 MYOZ3Q8TDC0 251 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 PRR25Q96S07 402 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 NAT8BQ9UHF3 227 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 SMPXQ9UHP9 88 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 CUBNO60494 3623 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 A8MWL6 223 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 SYNJ2BPP57105 145 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 MRPL18Q9H0U6 180 aaKnown RBP9.83□□□□□ -0.84
TRIM40-206ENST00000376724 UFC1Q9Y3C8 167 aa9.83□□□□□ -0.84
TRIM40-206ENST00000376724 DEFB136Q30KP8 78 aa9.82□□□□□ -0.84
TRIM40-206ENST00000376724 SAPCD1Q5SSQ6 148 aa9.82□□□□□ -0.84
TRIM40-206ENST00000376724 K7EMT4 169 aa9.82□□□□□ -0.84
TRIM40-206ENST00000376724 ZNF705DP0CH99 300 aaPredicted RBP9.82□□□□□ -0.84
TRIM40-206ENST00000376724 ZNF705BP0CI00 300 aaPredicted RBP9.82□□□□□ -0.84
TRIM40-206ENST00000376724 RNF152Q8N8N0 203 aa9.82□□□□□ -0.84
TRIM40-206ENST00000376724 ZNF738Q8NE65 137 aa9.82□□□□□ -0.84
TRIM40-206ENST00000376724 GTSF1Q8WW33 167 aa9.82□□□□□ -0.84
TRIM40-206ENST00000376724 PGLYRP4Q96LB8 373 aa9.82□□□□□ -0.84
TRIM40-206ENST00000376724 C20orf173Q96LM9 149 aa9.82□□□□□ -0.84
TRIM40-206ENST00000376724 NRN1Q9NPD7 142 aa9.82□□□□□ -0.84
TRIM40-206ENST00000376724 NPIPB6E9PJ23 425 aa9.81□□□□□ -0.84
TRIM40-206ENST00000376724 SCGB1D1O95968 90 aa9.81□□□□□ -0.84
TRIM40-206ENST00000376724 HOXD3P31249 432 aaPredicted RBP9.81□□□□□ -0.84
TRIM40-206ENST00000376724 COTL1Q14019 142 aa9.81□□□□□ -0.84
TRIM40-206ENST00000376724 CT83Q5H943 113 aa9.81□□□□□ -0.84
TRIM40-206ENST00000376724 DMRTA1Q5VZB9 504 aa9.81□□□□□ -0.84
TRIM40-206ENST00000376724 ZNF705AQ6ZN79 300 aaPredicted RBP9.81□□□□□ -0.84
TRIM40-206ENST00000376724 NDFIP1Q9BT67 221 aa9.81□□□□□ -0.84
TRIM40-206ENST00000376724 MYO9AB2RTY4 2548 aa9.81□□□□□ -0.84
TRIM40-206ENST00000376724 ANK3Q12955 4377 aaKnown RBP9.81□□□□□ -0.84
TRIM40-206ENST00000376724 TMEM213A2RRL7 107 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 FBLL1A6NHQ2 334 aaKnown RBP9.8□□□□□ -0.84
TRIM40-206ENST00000376724 SH2D1AO60880 128 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 TCTEX1D4Q5JR98 221 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 WFDC3Q8IUB2 231 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 OR4B1Q8NGF8 309 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 GNB1LQ9BYB4 327 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 AGPAT4-IT1Q9H0P7 198 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 TMSB15BA0A087X1C1 80 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 RBAKDNA6NC62 111 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 LY6G6DO95868 133 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 CAMPP49913 170 aa9.8□□□□□ -0.84
TRIM40-206ENST00000376724 ZNF80P51504 273 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms