RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 LRP6O75581 1613 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 A0A0G2JRQ6 117 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 LINC00473A8K010 186 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 USP17L23D6RBM5 183 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 IGFBP6P24592 240 aaPredicted RBP5.24□□□□□ -1.57
UBR4-204ENST00000375254 STPG1Q5TH74 334 aa5.24□□□□□ -1.57
UBR4-204ENST00000375254 RPL35AP18077 110 aaKnown RBP5.23□□□□□ -1.57
UBR4-204ENST00000375254 MSRB2Q9Y3D2 182 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 PLXNB1O43157 2135 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 MBD3L2Q8NHZ7 208 aaPredicted RBP5.23□□□□□ -1.57
UBR4-204ENST00000375254 MIFP14174 115 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 GNLYP22749 145 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 E9PLN8 166 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 FAM216BQ8N7L0 139 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 CHD2O14647 1828 aaKnown RBP5.23□□□□□ -1.57
UBR4-204ENST00000375254 MROH2AA6NES4 1674 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 C9orf47Q6ZRZ4 202 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 A0A1B0GXF2 115 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 TRBV10-3A0A0K0K1G6 114 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 WI2-2373I1.2A0A1W2PRP0 233 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 MIAQ16674 131 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 LIMD2Q9BT23 127 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 C14orf132Q9NPU4 83 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 RIMBP3Q9UFD9 1639 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 EFNA4P52798 201 aa5.23□□□□□ -1.57
UBR4-204ENST00000375254 FAM222AQ5U5X8 452 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 KLHL30-AS1Q8NEE0 82 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 A0A087WWL8 130 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 IGLV3-12A0A075B6K2 115 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 IGKV3-20P01619 116 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 DEFB103AP81534 67 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 MED1Q15648 1581 aaPredicted RBP5.22□□□□□ -1.57
UBR4-204ENST00000375254 OXLD1Q5BKU9 147 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 IGF2BP2-AS1Q96M15 143 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 MDFICQ9P1T7 246 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 TRAV23DV6A0A075B6W5 121 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 H3BRN7 92 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 C3orf36Q3SXR2 165 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 ZNF561-AS1K7EIQ3 104 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 SPAARA0A1B0GVQ0 90 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 VIRMAQ69YN4 1812 aaKnown RBP5.22□□□□□ -1.57
UBR4-204ENST00000375254 IGHV3-35A0A0C4DH35 117 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 K7ENP7 123 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 ZC2HC1AQ96GY0 325 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 WISP1O95388 367 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 Q6JHZ5 121 aa5.22□□□□□ -1.57
UBR4-204ENST00000375254 IGKV1-6A0A0C4DH72 117 aa5.21□□□□□ -1.57
UBR4-204ENST00000375254 BUB1B-PAK6H3BSN5 160 aa5.21□□□□□ -1.57
UBR4-204ENST00000375254 ENHOQ6UWT2 76 aa5.21□□□□□ -1.57
UBR4-204ENST00000375254 IGHV1OR15-1A0A075B7D0 117 aa5.21□□□□□ -1.57
UBR4-204ENST00000375254 LINC00311Q8N616 119 aa5.21□□□□□ -1.57
UBR4-204ENST00000375254 PSPNO60542 156 aa5.21□□□□□ -1.57
UBR4-204ENST00000375254 RIMBP3CA6NJZ7 1639 aa5.21□□□□□ -1.57
UBR4-204ENST00000375254 RIMBP3BA6NNM3 1639 aa5.21□□□□□ -1.57
UBR4-204ENST00000375254 DCTN5Q9BTE1 182 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 CD59P13987 128 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 C1orf147Q96MC9 270 aaPredicted RBP5.21□□□□□ -1.58
UBR4-204ENST00000375254 WIPF1O43516 503 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 SPHKAPQ2M3C7 1700 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 TNRC6AQ8NDV7 1962 aaKnown RBP5.21□□□□□ -1.58
UBR4-204ENST00000375254 TRBV7-3A0A075B6L6 115 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 TRAV4A0A0B4J268 109 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 CELA2AP08217 269 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 GATA4P43694 442 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 C2orf91Q6ZV80 131 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 RNF114Q9Y508 228 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 PEAK1Q9H792 1746 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 MAP2P11137 1827 aaKnown RBP5.21□□□□□ -1.58
UBR4-204ENST00000375254 IGHV3OR16-13A0A075B7E8 117 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 IGHV3-74A0A0B4J1X5 117 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 IGHV1-3A0A0C4DH29 117 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 IGHV1-8P0DP01 117 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 FAM19A3Q7Z5A8 133 aa5.21□□□□□ -1.58
UBR4-204ENST00000375254 IGHV3-33P01772 117 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 FOXE3Q13461 319 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 CNOT1A5YKK6 2376 aaKnown RBP5.2□□□□□ -1.58
UBR4-204ENST00000375254 IGHV3-49A0A0A0MS15 119 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 TRBV7-7A0A0K0K1E9 115 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 DICER1Q9UPY3 1922 aaKnown RBP5.2□□□□□ -1.58
UBR4-204ENST00000375254 J3QLI3 93 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 SERTAD4-AS1Q5TG53 156 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 CLPSL1A2RUU4 121 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 MLANAQ16655 118 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 SDIM1Q6ZPB5 146 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 COX7B2Q8TF08 81 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 CCDC140Q96MF4 163 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 ACACAQ13085 2346 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 CD24P25063 80 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 IGHV1OR15-9A0A0B4J2B8 117 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 C20orf204Q6ZNR8 217 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 C3orf56Q8N813 242 aa5.2□□□□□ -1.58
UBR4-204ENST00000375254 TMEM131LA2VDJ0 1609 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 TRGV1A0A0A0MS02 117 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 C5orf67F2Z3F1 127 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 LINC00173Q6ZV60 143 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 C19orf71A6NCJ1 209 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 ZNF833PQ6ZTB9 187 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 FAM167A-AS1Q96KT0 104 aa5.19□□□□□ -1.58
UBR4-204ENST00000375254 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.19□□□□□ -1.58
UBR4-204ENST00000375254 PPDPFQ9H3Y8 114 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms