RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 TRAV8-1A0A0A6YYK1 113 aa12.99□□□□□ -0.33
PFDN6-201ENST00000374606 TRAV34A0A0B4J273 112 aa12.99□□□□□ -0.33
PFDN6-201ENST00000374606 FBLL1A6NHQ2 334 aaKnown RBP12.99□□□□□ -0.33
PFDN6-201ENST00000374606 NPIPB6E9PJ23 425 aa12.99□□□□□ -0.33
PFDN6-201ENST00000374606 S100A9P06702 114 aaKnown RBP12.99□□□□□ -0.33
PFDN6-201ENST00000374606 ZNF705DP0CH99 300 aaPredicted RBP12.99□□□□□ -0.33
PFDN6-201ENST00000374606 ZNF705BP0CI00 300 aaPredicted RBP12.99□□□□□ -0.33
PFDN6-201ENST00000374606 RPL35P42766 123 aaKnown RBP12.99□□□□□ -0.33
PFDN6-201ENST00000374606 TMEM183BQ1AE95 376 aa12.99□□□□□ -0.33
PFDN6-201ENST00000374606 SOHLH1Q5JUK2 328 aa12.99□□□□□ -0.33
PFDN6-201ENST00000374606 TMEM78Q5T7P6 136 aa12.99□□□□□ -0.33
PFDN6-201ENST00000374606 APRG1Q8IVJ8 170 aa12.99□□□□□ -0.33
PFDN6-201ENST00000374606 LINC00479Q96M42 142 aa12.99□□□□□ -0.33
PFDN6-201ENST00000374606 B9D2Q9BPU9 175 aa12.99□□□□□ -0.33
PFDN6-201ENST00000374606 SAV1Q9H4B6 383 aaPredicted RBP12.99□□□□□ -0.33
PFDN6-201ENST00000374606 A0A0J9YX75 114 aa12.98□□□□□ -0.33
PFDN6-201ENST00000374606 TMEM218A2RU14 115 aa12.98□□□□□ -0.33
PFDN6-201ENST00000374606 KNCNA6PVL3 124 aa12.98□□□□□ -0.33
PFDN6-201ENST00000374606 FLI1Q01543 452 aaPredicted RBP12.98□□□□□ -0.33
PFDN6-201ENST00000374606 EGFEM1PQ0D2K5 195 aa12.98□□□□□ -0.33
PFDN6-201ENST00000374606 GDF5OSQ5U4N7 250 aa12.98□□□□□ -0.33
PFDN6-201ENST00000374606 Q86TA4 180 aa12.98□□□□□ -0.33
PFDN6-201ENST00000374606 SGK494Q96LW2 274 aa12.98□□□□□ -0.33
PFDN6-201ENST00000374606 VGLL1Q99990 258 aa12.98□□□□□ -0.33
PFDN6-201ENST00000374606 SMIM7Q9BQ49 75 aa12.98□□□□□ -0.33
PFDN6-201ENST00000374606 KLF12Q9Y4X4 402 aa12.98□□□□□ -0.33
PFDN6-201ENST00000374606 ZNF727A8MUV8 499 aa12.97□□□□□ -0.33
PFDN6-201ENST00000374606 DUSP14O95147 198 aaKnown RBP12.97□□□□□ -0.33
PFDN6-201ENST00000374606 IGLV2-11P01706 119 aa12.97□□□□□ -0.33
PFDN6-201ENST00000374606 TAS2R60P59551 318 aa12.97□□□□□ -0.33
PFDN6-201ENST00000374606 KRTAP10-11P60412 298 aa12.97□□□□□ -0.33
PFDN6-201ENST00000374606 ERCC8Q13216 396 aa12.97□□□□□ -0.33
PFDN6-201ENST00000374606 ZNF124Q15973 351 aa12.97□□□□□ -0.33
PFDN6-201ENST00000374606 ACTL10Q5JWF8 245 aa12.97□□□□□ -0.33
PFDN6-201ENST00000374606 C9orf47Q6ZRZ4 202 aa12.97□□□□□ -0.33
PFDN6-201ENST00000374606 PRNTQ86SH4 94 aa12.97□□□□□ -0.33
PFDN6-201ENST00000374606 Q8TAT8 98 aa12.97□□□□□ -0.33
PFDN6-201ENST00000374606 PSG8Q9UQ74 426 aa12.97□□□□□ -0.33
PFDN6-201ENST00000374606 HLA-DRB4P13762 266 aa12.96□□□□□ -0.33
PFDN6-201ENST00000374606 GNG4P50150 75 aa12.96□□□□□ -0.33
PFDN6-201ENST00000374606 FAM74A3Q4VXF1 159 aa12.96□□□□□ -0.33
PFDN6-201ENST00000374606 CENPWQ5EE01 88 aa12.96□□□□□ -0.33
PFDN6-201ENST00000374606 NDFIP1Q9BT67 221 aa12.96□□□□□ -0.33
PFDN6-201ENST00000374606 AGPAT4-IT1Q9H0P7 198 aa12.96□□□□□ -0.33
PFDN6-201ENST00000374606 WFDC10AQ9H1F0 79 aa12.96□□□□□ -0.33
PFDN6-201ENST00000374606 C19orf73Q9NVV2 129 aa12.96□□□□□ -0.33
PFDN6-201ENST00000374606 HLA-DRB4X5D2U9 266 aa12.96□□□□□ -0.33
PFDN6-201ENST00000374606 TRBV6-1A0A0K0K1D8 114 aa12.95□□□□□ -0.34
PFDN6-201ENST00000374606 F8W036 122 aa12.95□□□□□ -0.34
PFDN6-201ENST00000374606 ZNF138P52744 262 aa12.95□□□□□ -0.34
PFDN6-201ENST00000374606 OR4B1Q8NGF8 309 aa12.95□□□□□ -0.34
PFDN6-201ENST00000374606 IGF2BP2-AS1Q96M15 143 aa12.95□□□□□ -0.34
PFDN6-201ENST00000374606 LINC00477Q96M19 166 aa12.95□□□□□ -0.34
PFDN6-201ENST00000374606 PRR25Q96S07 402 aa12.95□□□□□ -0.34
PFDN6-201ENST00000374606 TRBV20OR9-2A0A075B6H5 130 aa12.94□□□□□ -0.34
PFDN6-201ENST00000374606 C9JCJ5 164 aa12.94□□□□□ -0.34
PFDN6-201ENST00000374606 LTAP01374 205 aa12.94□□□□□ -0.34
PFDN6-201ENST00000374606 ADCYAP1P18509 176 aa12.94□□□□□ -0.34
PFDN6-201ENST00000374606 STHQ8IWL8 128 aa12.94□□□□□ -0.34
PFDN6-201ENST00000374606 PPP1R14DQ9NXH3 145 aa12.94□□□□□ -0.34
PFDN6-201ENST00000374606 ZNF492Q9P255 531 aa12.94□□□□□ -0.34
PFDN6-201ENST00000374606 H3BMM0 161 aa12.93□□□□□ -0.34
PFDN6-201ENST00000374606 IGKV3-20P01619 116 aa12.93□□□□□ -0.34
PFDN6-201ENST00000374606 BAGE2Q86Y30 109 aa12.93□□□□□ -0.34
PFDN6-201ENST00000374606 NIPSNAP3BQ9BS92 247 aa12.93□□□□□ -0.34
PFDN6-201ENST00000374606 SEC11CQ9BY50 192 aa12.93□□□□□ -0.34
PFDN6-201ENST00000374606 ZFP30Q9Y2G7 519 aa12.93□□□□□ -0.34
PFDN6-201ENST00000374606 LENEPQ9Y5L5 61 aa12.93□□□□□ -0.34
PFDN6-201ENST00000374606 BIRC6Q9NR09 4857 aa12.93□□□□□ -0.34
PFDN6-201ENST00000374606 SORL1Q92673 2214 aa12.93□□□□□ -0.34
PFDN6-201ENST00000374606 RYR2Q92736 4967 aa12.93□□□□□ -0.34
PFDN6-201ENST00000374606 KRBOX1C9JBD0 128 aa12.92□□□□□ -0.34
PFDN6-201ENST00000374606 CT45A10P0DMU9 189 aa12.92□□□□□ -0.34
PFDN6-201ENST00000374606 SAPCD1Q5SSQ6 148 aa12.92□□□□□ -0.34
PFDN6-201ENST00000374606 DEFB125Q8N687 156 aa12.92□□□□□ -0.34
PFDN6-201ENST00000374606 ODF3Q96PU9 254 aa12.92□□□□□ -0.34
PFDN6-201ENST00000374606 ASCL2Q99929 193 aa12.92□□□□□ -0.34
PFDN6-201ENST00000374606 NAT8Q9UHE5 227 aa12.92□□□□□ -0.34
PFDN6-201ENST00000374606 A8MTW9 85 aa12.91□□□□□ -0.34
PFDN6-201ENST00000374606 LEPP41159 167 aa12.91□□□□□ -0.34
PFDN6-201ENST00000374606 TMEM241Q24JQ0 296 aa12.91□□□□□ -0.34
PFDN6-201ENST00000374606 TRPT1Q86TN4 253 aaKnown RBP12.91□□□□□ -0.34
PFDN6-201ENST00000374606 TMEM183AQ8IXX5 376 aa12.91□□□□□ -0.34
PFDN6-201ENST00000374606 NHLRC2Q8NBF2 726 aa12.91□□□□□ -0.34
PFDN6-201ENST00000374606 SMIM12Q96EX1 92 aa12.91□□□□□ -0.34
PFDN6-201ENST00000374606 U3KQK5 164 aa12.91□□□□□ -0.34
PFDN6-201ENST00000374606 DYNC2H1Q8NCM8 4307 aaKnown RBP12.9□□□□□ -0.34
PFDN6-201ENST00000374606 TRBV7-9A0A0J9YWB2 115 aa12.9□□□□□ -0.34
PFDN6-201ENST00000374606 PGPEP1LA6NFU8 196 aa12.9□□□□□ -0.34
PFDN6-201ENST00000374606 NHLRC4P0CG21 123 aaPredicted RBP12.9□□□□□ -0.34
PFDN6-201ENST00000374606 MGST1P10620 155 aaKnown RBP12.9□□□□□ -0.34
PFDN6-201ENST00000374606 Q8N1Y9 231 aa12.9□□□□□ -0.34
PFDN6-201ENST00000374606 CLUHP3Q96NS8 147 aa12.9□□□□□ -0.34
PFDN6-201ENST00000374606 SRD5A3Q9H8P0 318 aa12.9□□□□□ -0.34
PFDN6-201ENST00000374606 LY96Q9Y6Y9 160 aa12.9□□□□□ -0.34
PFDN6-201ENST00000374606 RBMY1BA6NDE4 496 aaKnown RBP12.89□□□□□ -0.35
PFDN6-201ENST00000374606 RBMY1EA6NEQ0 496 aaKnown RBP12.89□□□□□ -0.35
PFDN6-201ENST00000374606 C3orf84H3BNL1 204 aa12.89□□□□□ -0.35
PFDN6-201ENST00000374606 IGLV2-8P01709 118 aa12.89□□□□□ -0.35
PFDN6-201ENST00000374606 RBMY1DP0C7P1 496 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms